Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Cd3e-201ENSMUST00000102832 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ccdc28aQ8CEI3 B4galt4-204ENSMUST00000114711 1481 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ccdc28aQ8CEI3 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc28aQ8CEI3 Dopey2-201ENSMUST00000045004 7319 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc28aQ8CEI3 Wnt5a-202ENSMUST00000112272 3650 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc28aQ8CEI3 Trim17-201ENSMUST00000047697 3664 ntTSL 2 BASIC11.31□□□□□ -0.6
Ccdc28aQ8CEI3 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc28aQ8CEI3 Zkscan6-201ENSMUST00000018491 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc28aQ8CEI3 Trak2-201ENSMUST00000027186 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc28aQ8CEI3 Arhgap6-204ENSMUST00000112129 2487 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc28aQ8CEI3 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc28aQ8CEI3 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc28aQ8CEI3 Gm19027-201ENSMUST00000187291 1355 ntBASIC11.31□□□□□ -0.6
Ccdc28aQ8CEI3 Nktr-201ENSMUST00000035112 7022 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc28aQ8CEI3 Ppp2r2a-201ENSMUST00000089230 4010 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc28aQ8CEI3 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc28aQ8CEI3 Dcun1d2-203ENSMUST00000110839 2937 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc28aQ8CEI3 Gm32219-201ENSMUST00000221234 1819 ntTSL 5 BASIC11.31□□□□□ -0.6
Ccdc28aQ8CEI3 9430064I24Rik-201ENSMUST00000206516 2669 ntBASIC11.31□□□□□ -0.6
Ccdc28aQ8CEI3 Rbp1-201ENSMUST00000052068 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc28aQ8CEI3 Mfn2-204ENSMUST00000105716 4241 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc28aQ8CEI3 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc28aQ8CEI3 Flna-202ENSMUST00000101454 8345 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc28aQ8CEI3 Gm11411-201ENSMUST00000117951 719 ntBASIC11.31□□□□□ -0.6
Ccdc28aQ8CEI3 Gm13284-201ENSMUST00000121020 547 ntBASIC11.31□□□□□ -0.6
Ccdc28aQ8CEI3 Gm12367-202ENSMUST00000146909 2105 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc28aQ8CEI3 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC11.31□□□□□ -0.6
Ccdc28aQ8CEI3 Gm16226-204ENSMUST00000162639 423 ntTSL 3 BASIC11.31□□□□□ -0.6
Ccdc28aQ8CEI3 Gm17058-201ENSMUST00000168951 928 ntTSL 5 BASIC11.31□□□□□ -0.6
Ccdc28aQ8CEI3 Slc22a14-204ENSMUST00000170400 2110 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Ccdc28aQ8CEI3 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Ccdc28aQ8CEI3 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Ccdc28aQ8CEI3 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc28aQ8CEI3 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Ccdc28aQ8CEI3 Gm37826-201ENSMUST00000195329 322 ntBASIC11.31□□□□□ -0.6
Ccdc28aQ8CEI3 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC11.31□□□□□ -0.6
Ccdc28aQ8CEI3 Mir7686-201ENSMUST00000200604 57 ntBASIC11.31□□□□□ -0.6
Ccdc28aQ8CEI3 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc28aQ8CEI3 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC11.31□□□□□ -0.6
Ccdc28aQ8CEI3 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
Ccdc28aQ8CEI3 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc28aQ8CEI3 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc28aQ8CEI3 Lep-201ENSMUST00000069789 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc28aQ8CEI3 Shroom2-202ENSMUST00000101141 7494 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc28aQ8CEI3 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Ccdc28aQ8CEI3 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC11.31□□□□□ -0.6
Ccdc28aQ8CEI3 Khdrbs2-204ENSMUST00000188257 5278 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc28aQ8CEI3 5730596B20Rik-201ENSMUST00000070587 3354 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Ccdc28aQ8CEI3 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc28aQ8CEI3 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc28aQ8CEI3 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Ccdc28aQ8CEI3 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ccdc28aQ8CEI3 Nlgn3-201ENSMUST00000065858 8465 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc28aQ8CEI3 Supt20-201ENSMUST00000029315 2112 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc28aQ8CEI3 Gm16429-202ENSMUST00000201400 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc28aQ8CEI3 Gm7971-201ENSMUST00000086950 1848 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Ccdc28aQ8CEI3 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc28aQ8CEI3 Dhdds-209ENSMUST00000144668 3219 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc28aQ8CEI3 Ube2l3-201ENSMUST00000090192 2609 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc28aQ8CEI3 Erbb3-201ENSMUST00000082059 6016 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc28aQ8CEI3 6430562O15Rik-201ENSMUST00000180491 2488 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc28aQ8CEI3 Ly9-203ENSMUST00000111277 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc28aQ8CEI3 Plrg1-204ENSMUST00000150268 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc28aQ8CEI3 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc28aQ8CEI3 Gsdma3-202ENSMUST00000107508 1587 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Ccdc28aQ8CEI3 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC11.3□□□□□ -0.6
Ccdc28aQ8CEI3 Lypla1-202ENSMUST00000115529 930 ntTSL 2 BASIC11.3□□□□□ -0.6
Ccdc28aQ8CEI3 Gm12856-201ENSMUST00000119471 1293 ntBASIC11.3□□□□□ -0.6
Ccdc28aQ8CEI3 Gm15725-201ENSMUST00000119947 1090 ntBASIC11.3□□□□□ -0.6
Ccdc28aQ8CEI3 Mir1893-201ENSMUST00000122565 83 ntBASIC11.3□□□□□ -0.6
Ccdc28aQ8CEI3 4921508D12Rik-201ENSMUST00000124095 1075 ntTSL 2 BASIC11.3□□□□□ -0.6
Ccdc28aQ8CEI3 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC11.3□□□□□ -0.6
Ccdc28aQ8CEI3 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc28aQ8CEI3 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc28aQ8CEI3 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Ccdc28aQ8CEI3 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC11.3□□□□□ -0.6
Ccdc28aQ8CEI3 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC11.3□□□□□ -0.6
Ccdc28aQ8CEI3 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC11.3□□□□□ -0.6
Ccdc28aQ8CEI3 Gm18466-201ENSMUST00000209147 499 ntBASIC11.3□□□□□ -0.6
Ccdc28aQ8CEI3 AC129975.1-201ENSMUST00000224816 592 ntBASIC11.3□□□□□ -0.6
Ccdc28aQ8CEI3 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc28aQ8CEI3 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc28aQ8CEI3 Rnf216-201ENSMUST00000053498 4474 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc28aQ8CEI3 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc28aQ8CEI3 Smad9-201ENSMUST00000029371 5368 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc28aQ8CEI3 Pigk-204ENSMUST00000159899 4737 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc28aQ8CEI3 Elovl5-201ENSMUST00000034904 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc28aQ8CEI3 Slc5a9-201ENSMUST00000102719 2460 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc28aQ8CEI3 Gm38025-201ENSMUST00000193926 2308 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc28aQ8CEI3 Nfrkb-201ENSMUST00000086167 5161 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc28aQ8CEI3 Celf5-202ENSMUST00000119060 4166 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ccdc28aQ8CEI3 Dhcr7-211ENSMUST00000207143 1652 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Ccdc28aQ8CEI3 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC11.3□□□□□ -0.6
Ccdc28aQ8CEI3 Sema4g-203ENSMUST00000179305 4290 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc28aQ8CEI3 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc28aQ8CEI3 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Ccdc28aQ8CEI3 AC164161.2-201ENSMUST00000217446 1730 ntTSL 5 BASIC11.29□□□□□ -0.6
Ccdc28aQ8CEI3 Dnmt1-202ENSMUST00000177754 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ccdc28aQ8CEI3 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
Ccdc28aQ8CEI3 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms