Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pabpn1Q8CCS6 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC16.4■□□□□ 0.22
Pabpn1Q8CCS6 Asb5-201ENSMUST00000033918 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pabpn1Q8CCS6 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pabpn1Q8CCS6 Gm36670-202ENSMUST00000210400 1405 ntTSL 5 BASIC16.4■□□□□ 0.22
Pabpn1Q8CCS6 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pabpn1Q8CCS6 Gm11756-202ENSMUST00000107312 924 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Pabpn1Q8CCS6 Gm12817-201ENSMUST00000119622 610 ntBASIC16.4■□□□□ 0.22
Pabpn1Q8CCS6 Gm12927-201ENSMUST00000150252 373 ntTSL 2 BASIC16.4■□□□□ 0.22
Pabpn1Q8CCS6 Gm18513-201ENSMUST00000177313 560 ntBASIC16.4■□□□□ 0.22
Pabpn1Q8CCS6 Gm28167-201ENSMUST00000187644 550 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pabpn1Q8CCS6 1700019D03Rik-206ENSMUST00000190831 653 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Pabpn1Q8CCS6 Gm36973-201ENSMUST00000193942 259 ntBASIC16.4■□□□□ 0.22
Pabpn1Q8CCS6 Gm38839-201ENSMUST00000203833 633 ntTSL 2 BASIC16.4■□□□□ 0.22
Pabpn1Q8CCS6 Gm36028-202ENSMUST00000205931 1161 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Pabpn1Q8CCS6 Gm4275-203ENSMUST00000210214 1298 ntTSL 5 BASIC16.4■□□□□ 0.22
Pabpn1Q8CCS6 Rnf212b-201ENSMUST00000218311 1201 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Pabpn1Q8CCS6 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pabpn1Q8CCS6 Calcoco2-201ENSMUST00000068686 1621 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pabpn1Q8CCS6 Pax5-202ENSMUST00000102932 1460 ntTSL 5 BASIC16.4■□□□□ 0.22
Pabpn1Q8CCS6 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pabpn1Q8CCS6 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pabpn1Q8CCS6 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pabpn1Q8CCS6 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Pabpn1Q8CCS6 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Pabpn1Q8CCS6 Spz1-201ENSMUST00000050658 1537 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Pabpn1Q8CCS6 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.22
Pabpn1Q8CCS6 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Pabpn1Q8CCS6 Cab39l-206ENSMUST00000225595 1380 ntBASIC16.39■□□□□ 0.21
Pabpn1Q8CCS6 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pabpn1Q8CCS6 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pabpn1Q8CCS6 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pabpn1Q8CCS6 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pabpn1Q8CCS6 Gm23659-201ENSMUST00000102245 110 ntBASIC16.39■□□□□ 0.21
Pabpn1Q8CCS6 Ighv1-72-201ENSMUST00000103541 396 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Pabpn1Q8CCS6 Gm13197-201ENSMUST00000117204 225 ntBASIC16.39■□□□□ 0.21
Pabpn1Q8CCS6 Gm11203-201ENSMUST00000122169 741 ntBASIC16.39■□□□□ 0.21
Pabpn1Q8CCS6 Gm12257-201ENSMUST00000148244 585 ntTSL 3 BASIC16.39■□□□□ 0.21
Pabpn1Q8CCS6 Gm37362-201ENSMUST00000194567 634 ntTSL 5 BASIC16.39■□□□□ 0.21
Pabpn1Q8CCS6 Gm6073-201ENSMUST00000198253 466 ntBASIC16.39■□□□□ 0.21
Pabpn1Q8CCS6 AC154461.3-201ENSMUST00000224831 573 ntBASIC16.39■□□□□ 0.21
Pabpn1Q8CCS6 Gm23037-201ENSMUST00000083874 324 ntBASIC16.39■□□□□ 0.21
Pabpn1Q8CCS6 Aadacl4-201ENSMUST00000094510 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pabpn1Q8CCS6 Gabrr2-201ENSMUST00000024035 1820 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pabpn1Q8CCS6 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pabpn1Q8CCS6 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pabpn1Q8CCS6 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Pabpn1Q8CCS6 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pabpn1Q8CCS6 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Pabpn1Q8CCS6 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pabpn1Q8CCS6 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pabpn1Q8CCS6 Bcl11a-203ENSMUST00000109516 2329 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Pabpn1Q8CCS6 AC121805.2-201ENSMUST00000218808 2538 ntBASIC16.39■□□□□ 0.21
Pabpn1Q8CCS6 Gm43827-201ENSMUST00000200623 1390 ntBASIC16.38■□□□□ 0.21
Pabpn1Q8CCS6 Vbp1-201ENSMUST00000033540 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pabpn1Q8CCS6 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Pabpn1Q8CCS6 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC16.38■□□□□ 0.21
Pabpn1Q8CCS6 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pabpn1Q8CCS6 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pabpn1Q8CCS6 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pabpn1Q8CCS6 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Pabpn1Q8CCS6 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
Pabpn1Q8CCS6 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC16.38■□□□□ 0.21
Pabpn1Q8CCS6 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Pabpn1Q8CCS6 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pabpn1Q8CCS6 Gap43-201ENSMUST00000102817 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pabpn1Q8CCS6 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pabpn1Q8CCS6 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC16.38■□□□□ 0.21
Pabpn1Q8CCS6 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pabpn1Q8CCS6 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pabpn1Q8CCS6 Sult6b2-201ENSMUST00000111768 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pabpn1Q8CCS6 Gm12977-201ENSMUST00000133742 942 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pabpn1Q8CCS6 1700057H15Rik-202ENSMUST00000143859 704 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Pabpn1Q8CCS6 Pcsk2os1-202ENSMUST00000156780 527 ntTSL 3 BASIC16.38■□□□□ 0.21
Pabpn1Q8CCS6 Gm37141-201ENSMUST00000191938 422 ntBASIC16.38■□□□□ 0.21
Pabpn1Q8CCS6 Spin3-ps-201ENSMUST00000192825 770 ntBASIC16.38■□□□□ 0.21
Pabpn1Q8CCS6 Gm37643-201ENSMUST00000195369 1260 ntBASIC16.38■□□□□ 0.21
Pabpn1Q8CCS6 D830044I16Rik-205ENSMUST00000206296 845 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Pabpn1Q8CCS6 CT030011.1-201ENSMUST00000221959 264 ntTSL 5 BASIC16.38■□□□□ 0.21
Pabpn1Q8CCS6 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pabpn1Q8CCS6 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pabpn1Q8CCS6 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pabpn1Q8CCS6 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pabpn1Q8CCS6 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pabpn1Q8CCS6 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC16.38■□□□□ 0.21
Pabpn1Q8CCS6 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Pabpn1Q8CCS6 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pabpn1Q8CCS6 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pabpn1Q8CCS6 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pabpn1Q8CCS6 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pabpn1Q8CCS6 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Pabpn1Q8CCS6 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC16.37■□□□□ 0.21
Pabpn1Q8CCS6 Olfr30-202ENSMUST00000215691 2404 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Pabpn1Q8CCS6 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pabpn1Q8CCS6 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pabpn1Q8CCS6 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Pabpn1Q8CCS6 Gm12188-201ENSMUST00000117387 310 ntBASIC16.37■□□□□ 0.21
Pabpn1Q8CCS6 Gm13254-201ENSMUST00000118295 654 ntBASIC16.37■□□□□ 0.21
Pabpn1Q8CCS6 Gm8832-201ENSMUST00000119890 395 ntBASIC16.37■□□□□ 0.21
Pabpn1Q8CCS6 Gm16077-201ENSMUST00000121915 655 ntBASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms