Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Sh3rf2Q8BZT2 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC10.95□□□□□ -0.66
Sh3rf2Q8BZT2 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sh3rf2Q8BZT2 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Sh3rf2Q8BZT2 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC10.95□□□□□ -0.66
Sh3rf2Q8BZT2 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Sh3rf2Q8BZT2 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Sh3rf2Q8BZT2 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sh3rf2Q8BZT2 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sh3rf2Q8BZT2 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sh3rf2Q8BZT2 Olfr1156-202ENSMUST00000216191 3300 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Sh3rf2Q8BZT2 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sh3rf2Q8BZT2 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sh3rf2Q8BZT2 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Sh3rf2Q8BZT2 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sh3rf2Q8BZT2 Slc45a4-202ENSMUST00000076224 4240 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sh3rf2Q8BZT2 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sh3rf2Q8BZT2 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sh3rf2Q8BZT2 Slc17a8-202ENSMUST00000105295 1863 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sh3rf2Q8BZT2 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sh3rf2Q8BZT2 Msl1-202ENSMUST00000037930 1303 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sh3rf2Q8BZT2 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sh3rf2Q8BZT2 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC10.94□□□□□ -0.66
Sh3rf2Q8BZT2 Lypla1-202ENSMUST00000115529 930 ntTSL 2 BASIC10.94□□□□□ -0.66
Sh3rf2Q8BZT2 Gm16518-201ENSMUST00000117960 508 ntBASIC10.94□□□□□ -0.66
Sh3rf2Q8BZT2 Gm12950-201ENSMUST00000121683 417 ntBASIC10.94□□□□□ -0.66
Sh3rf2Q8BZT2 4930594O21Rik-201ENSMUST00000129750 629 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sh3rf2Q8BZT2 Gm13857-201ENSMUST00000139645 173 ntBASIC10.94□□□□□ -0.66
Sh3rf2Q8BZT2 Gm24346-201ENSMUST00000158712 194 ntBASIC10.94□□□□□ -0.66
Sh3rf2Q8BZT2 Gm9574-201ENSMUST00000173127 845 ntBASIC10.94□□□□□ -0.66
Sh3rf2Q8BZT2 Gm26550-201ENSMUST00000180699 1184 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sh3rf2Q8BZT2 1700001J11Rik-201ENSMUST00000185917 759 ntBASIC10.94□□□□□ -0.66
Sh3rf2Q8BZT2 Gm38114-201ENSMUST00000191877 1232 ntBASIC10.94□□□□□ -0.66
Sh3rf2Q8BZT2 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC10.94□□□□□ -0.66
Sh3rf2Q8BZT2 Gm42803-201ENSMUST00000201051 451 ntBASIC10.94□□□□□ -0.66
Sh3rf2Q8BZT2 Chac2-201ENSMUST00000020553 1018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sh3rf2Q8BZT2 Gm45745-201ENSMUST00000211447 1180 ntBASIC10.94□□□□□ -0.66
Sh3rf2Q8BZT2 Gm19990-201ENSMUST00000219468 1224 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sh3rf2Q8BZT2 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC10.94□□□□□ -0.66
Sh3rf2Q8BZT2 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC10.94□□□□□ -0.66
Sh3rf2Q8BZT2 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sh3rf2Q8BZT2 Gm38140-201ENSMUST00000193617 2755 ntBASIC10.94□□□□□ -0.66
Sh3rf2Q8BZT2 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sh3rf2Q8BZT2 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sh3rf2Q8BZT2 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sh3rf2Q8BZT2 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sh3rf2Q8BZT2 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Sh3rf2Q8BZT2 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC10.94□□□□□ -0.66
Sh3rf2Q8BZT2 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sh3rf2Q8BZT2 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC10.94□□□□□ -0.66
Sh3rf2Q8BZT2 Psmc1-201ENSMUST00000021595 1591 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sh3rf2Q8BZT2 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Sh3rf2Q8BZT2 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sh3rf2Q8BZT2 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Sh3rf2Q8BZT2 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Sh3rf2Q8BZT2 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sh3rf2Q8BZT2 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sh3rf2Q8BZT2 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sh3rf2Q8BZT2 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC10.93□□□□□ -0.66
Sh3rf2Q8BZT2 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sh3rf2Q8BZT2 Gm11470-201ENSMUST00000118868 1475 ntBASIC10.93□□□□□ -0.66
Sh3rf2Q8BZT2 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sh3rf2Q8BZT2 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sh3rf2Q8BZT2 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sh3rf2Q8BZT2 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sh3rf2Q8BZT2 Cd247-205ENSMUST00000161559 1816 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sh3rf2Q8BZT2 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Sh3rf2Q8BZT2 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sh3rf2Q8BZT2 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sh3rf2Q8BZT2 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sh3rf2Q8BZT2 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Sh3rf2Q8BZT2 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sh3rf2Q8BZT2 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Sh3rf2Q8BZT2 Teddm3-201ENSMUST00000170665 1346 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Sh3rf2Q8BZT2 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC10.93□□□□□ -0.66
Sh3rf2Q8BZT2 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC10.93□□□□□ -0.66
Sh3rf2Q8BZT2 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Sh3rf2Q8BZT2 Rep15-201ENSMUST00000036194 1662 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Sh3rf2Q8BZT2 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Sh3rf2Q8BZT2 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sh3rf2Q8BZT2 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sh3rf2Q8BZT2 Mapk8-202ENSMUST00000111942 927 ntTSL 5 BASIC10.93□□□□□ -0.66
Sh3rf2Q8BZT2 Cryzl1-202ENSMUST00000114023 1154 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sh3rf2Q8BZT2 Gm8019-201ENSMUST00000119317 587 ntBASIC10.93□□□□□ -0.66
Sh3rf2Q8BZT2 Gm13204-201ENSMUST00000120110 821 ntBASIC10.93□□□□□ -0.66
Sh3rf2Q8BZT2 Gm6441-201ENSMUST00000120983 696 ntBASIC10.93□□□□□ -0.66
Sh3rf2Q8BZT2 Gm15982-201ENSMUST00000121681 554 ntBASIC10.93□□□□□ -0.66
Sh3rf2Q8BZT2 Cryzl1-206ENSMUST00000124282 1187 ntTSL 5 BASIC10.93□□□□□ -0.66
Sh3rf2Q8BZT2 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC10.93□□□□□ -0.66
Sh3rf2Q8BZT2 Gm7928-201ENSMUST00000181249 701 ntBASIC10.93□□□□□ -0.66
Sh3rf2Q8BZT2 Gm8601-201ENSMUST00000182096 909 ntBASIC10.93□□□□□ -0.66
Sh3rf2Q8BZT2 Gm27316-201ENSMUST00000184884 277 ntBASIC10.93□□□□□ -0.66
Sh3rf2Q8BZT2 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
Sh3rf2Q8BZT2 Gm38313-201ENSMUST00000191953 1266 ntBASIC10.93□□□□□ -0.66
Sh3rf2Q8BZT2 Myo1h-207ENSMUST00000196676 1256 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Sh3rf2Q8BZT2 Gm8234-201ENSMUST00000198523 1107 ntBASIC10.93□□□□□ -0.66
Sh3rf2Q8BZT2 Gm6794-201ENSMUST00000203829 457 ntBASIC10.93□□□□□ -0.66
Sh3rf2Q8BZT2 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC10.93□□□□□ -0.66
Sh3rf2Q8BZT2 Gpx4-ps2-201ENSMUST00000214811 555 ntBASIC10.93□□□□□ -0.66
Sh3rf2Q8BZT2 AC101205.2-201ENSMUST00000226206 715 ntBASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms