Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ift88Q61371 Zfp804b-202ENSMUST00000200317 4430 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Ift88Q61371 Lyn-201ENSMUST00000041377 3463 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ift88Q61371 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
Ift88Q61371 Gm39464-201ENSMUST00000214091 2169 ntTSL 5 BASIC11.88□□□□□ -0.51
Ift88Q61371 Gm44888-201ENSMUST00000209119 2541 ntBASIC11.88□□□□□ -0.51
Ift88Q61371 Cage1-203ENSMUST00000110233 2875 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Ift88Q61371 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ift88Q61371 Gm45089-201ENSMUST00000208082 2040 ntBASIC11.87□□□□□ -0.51
Ift88Q61371 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ift88Q61371 Adat1-202ENSMUST00000120457 1677 ntTSL 5 BASIC11.87□□□□□ -0.51
Ift88Q61371 Gm21817-201ENSMUST00000178584 2583 ntBASIC11.87□□□□□ -0.51
Ift88Q61371 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Ift88Q61371 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ift88Q61371 Rad50-201ENSMUST00000020649 5153 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ift88Q61371 Slco5a1-201ENSMUST00000115402 3690 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Ift88Q61371 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ift88Q61371 Myo18a-208ENSMUST00000108375 7513 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Ift88Q61371 Eif2ak4-203ENSMUST00000110869 1715 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ift88Q61371 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ift88Q61371 Lep-201ENSMUST00000069789 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ift88Q61371 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Ift88Q61371 4921508D12Rik-201ENSMUST00000124095 1075 ntTSL 2 BASIC11.87□□□□□ -0.51
Ift88Q61371 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ift88Q61371 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC11.87□□□□□ -0.51
Ift88Q61371 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Ift88Q61371 Gm19015-201ENSMUST00000184002 1189 ntBASIC11.87□□□□□ -0.51
Ift88Q61371 Mir6420-201ENSMUST00000185032 102 ntBASIC11.87□□□□□ -0.51
Ift88Q61371 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC11.87□□□□□ -0.51
Ift88Q61371 Gm37458-201ENSMUST00000194055 410 ntBASIC11.87□□□□□ -0.51
Ift88Q61371 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC11.87□□□□□ -0.51
Ift88Q61371 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC11.87□□□□□ -0.51
Ift88Q61371 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC11.87□□□□□ -0.51
Ift88Q61371 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC11.87□□□□□ -0.51
Ift88Q61371 Id2-203ENSMUST00000222667 958 ntBASIC11.87□□□□□ -0.51
Ift88Q61371 BX649293.1-201ENSMUST00000227437 631 ntBASIC11.87□□□□□ -0.51
Ift88Q61371 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ift88Q61371 Plxna3-201ENSMUST00000004326 6943 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ift88Q61371 Gm43307-201ENSMUST00000199465 2371 ntBASIC11.87□□□□□ -0.51
Ift88Q61371 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Ift88Q61371 Camk2b-210ENSMUST00000109815 3780 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Ift88Q61371 AC113441.2-201ENSMUST00000221538 1468 ntBASIC11.87□□□□□ -0.51
Ift88Q61371 9430064I24Rik-201ENSMUST00000206516 2669 ntBASIC11.87□□□□□ -0.51
Ift88Q61371 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ift88Q61371 Arhgap45-202ENSMUST00000099501 3948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ift88Q61371 4930578C19Rik-201ENSMUST00000044188 1896 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ift88Q61371 Gm6655-201ENSMUST00000201932 1309 ntBASIC11.86□□□□□ -0.51
Ift88Q61371 Gm9387-201ENSMUST00000098624 1320 ntBASIC11.86□□□□□ -0.51
Ift88Q61371 Adra1a-202ENSMUST00000159068 4282 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Ift88Q61371 Abcg1-201ENSMUST00000024829 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ift88Q61371 Usp47-206ENSMUST00000215510 4697 ntTSL 5 BASIC11.86□□□□□ -0.51
Ift88Q61371 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ift88Q61371 AC158355.1-201ENSMUST00000215895 1705 ntBASIC11.86□□□□□ -0.51
Ift88Q61371 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ift88Q61371 Slc22a14-204ENSMUST00000170400 2110 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Ift88Q61371 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ift88Q61371 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC11.86□□□□□ -0.51
Ift88Q61371 Cdkal1-202ENSMUST00000091674 2427 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ift88Q61371 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Ift88Q61371 Gm16226-204ENSMUST00000162639 423 ntTSL 3 BASIC11.86□□□□□ -0.51
Ift88Q61371 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ift88Q61371 Gm27953-201ENSMUST00000185171 143 ntBASIC11.86□□□□□ -0.51
Ift88Q61371 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC11.86□□□□□ -0.51
Ift88Q61371 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC11.86□□□□□ -0.51
Ift88Q61371 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ift88Q61371 Gm18466-201ENSMUST00000209147 499 ntBASIC11.86□□□□□ -0.51
Ift88Q61371 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC11.86□□□□□ -0.51
Ift88Q61371 Msrb3-201ENSMUST00000092143 3843 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ift88Q61371 Morf4l2-215ENSMUST00000169418 1782 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Ift88Q61371 Upk1b-201ENSMUST00000057767 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ift88Q61371 Gm44115-201ENSMUST00000203917 2069 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ift88Q61371 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ift88Q61371 Phf20-ps-201ENSMUST00000185066 2886 ntBASIC11.86□□□□□ -0.51
Ift88Q61371 Wnt5a-202ENSMUST00000112272 3650 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ift88Q61371 Slc7a1-201ENSMUST00000048116 7179 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ift88Q61371 Plcxd2-201ENSMUST00000130481 7140 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ift88Q61371 Gm42450-201ENSMUST00000199286 2644 ntTSL 5 BASIC11.86□□□□□ -0.51
Ift88Q61371 Specc1-208ENSMUST00000201624 2518 ntTSL 5 BASIC11.86□□□□□ -0.51
Ift88Q61371 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ift88Q61371 Atxn2l-206ENSMUST00000206577 3894 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Ift88Q61371 Rnf2-201ENSMUST00000076110 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ift88Q61371 Gbp3-201ENSMUST00000029935 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ift88Q61371 Ifih1-201ENSMUST00000028259 5470 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ift88Q61371 5830411N06Rik-203ENSMUST00000164583 3342 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ift88Q61371 Slc17a8-202ENSMUST00000105295 1863 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ift88Q61371 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ift88Q61371 4632418H02Rik-201ENSMUST00000217287 2721 ntBASIC11.85□□□□□ -0.51
Ift88Q61371 Cfap43-202ENSMUST00000095998 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ift88Q61371 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ift88Q61371 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ift88Q61371 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC11.85□□□□□ -0.51
Ift88Q61371 Hsdl1-204ENSMUST00000212517 2215 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ift88Q61371 Fam186a-202ENSMUST00000100209 9334 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Ift88Q61371 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ift88Q61371 Adig-202ENSMUST00000109484 488 ntTSL 2 BASIC11.85□□□□□ -0.51
Ift88Q61371 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC11.85□□□□□ -0.51
Ift88Q61371 Gm11952-201ENSMUST00000121172 821 ntBASIC11.85□□□□□ -0.51
Ift88Q61371 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ift88Q61371 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ift88Q61371 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms