Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps54Q5SPW0 Gm15519-201ENSMUST00000120088 1566 ntBASIC12.93□□□□□ -0.34
Vps54Q5SPW0 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Vps54Q5SPW0 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Vps54Q5SPW0 Plrg1-204ENSMUST00000150268 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps54Q5SPW0 Gm26658-201ENSMUST00000181067 2500 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Vps54Q5SPW0 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps54Q5SPW0 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Vps54Q5SPW0 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC12.93□□□□□ -0.34
Vps54Q5SPW0 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps54Q5SPW0 Tasp1-203ENSMUST00000110079 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps54Q5SPW0 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps54Q5SPW0 Eef1akmt4-202ENSMUST00000119224 1464 ntTSL 2 BASIC12.92□□□□□ -0.34
Vps54Q5SPW0 Gm5641-201ENSMUST00000091130 1488 ntBASIC12.92□□□□□ -0.34
Vps54Q5SPW0 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Vps54Q5SPW0 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC12.92□□□□□ -0.34
Vps54Q5SPW0 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Vps54Q5SPW0 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Vps54Q5SPW0 Ttpal-207ENSMUST00000171696 4522 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps54Q5SPW0 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps54Q5SPW0 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps54Q5SPW0 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC12.92□□□□□ -0.34
Vps54Q5SPW0 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps54Q5SPW0 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps54Q5SPW0 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps54Q5SPW0 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps54Q5SPW0 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Vps54Q5SPW0 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC12.92□□□□□ -0.34
Vps54Q5SPW0 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC12.92□□□□□ -0.34
Vps54Q5SPW0 Ccdc32-203ENSMUST00000110834 828 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Vps54Q5SPW0 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Vps54Q5SPW0 Gm12947-201ENSMUST00000116114 420 ntBASIC12.92□□□□□ -0.34
Vps54Q5SPW0 Gm13039-201ENSMUST00000118638 794 ntBASIC12.92□□□□□ -0.34
Vps54Q5SPW0 Mir1896-201ENSMUST00000122641 81 ntBASIC12.92□□□□□ -0.34
Vps54Q5SPW0 Gm22344-201ENSMUST00000122642 278 ntBASIC12.92□□□□□ -0.34
Vps54Q5SPW0 Fam229b-208ENSMUST00000139743 679 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Vps54Q5SPW0 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Vps54Q5SPW0 Gzmn-201ENSMUST00000015587 956 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps54Q5SPW0 Gm8122-201ENSMUST00000165988 1404 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Vps54Q5SPW0 Gm26586-201ENSMUST00000181918 1745 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Vps54Q5SPW0 Mir6941-201ENSMUST00000184711 59 ntBASIC12.92□□□□□ -0.34
Vps54Q5SPW0 Gm27440-201ENSMUST00000184785 107 ntBASIC12.92□□□□□ -0.34
Vps54Q5SPW0 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Vps54Q5SPW0 Gm42751-201ENSMUST00000198065 559 ntBASIC12.92□□□□□ -0.34
Vps54Q5SPW0 AC154220.1-201ENSMUST00000225033 1705 ntBASIC12.92□□□□□ -0.34
Vps54Q5SPW0 Magoh-201ENSMUST00000030348 692 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps54Q5SPW0 Ern2-201ENSMUST00000033153 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps54Q5SPW0 Gm9758-201ENSMUST00000035980 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps54Q5SPW0 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps54Q5SPW0 Fam3b-201ENSMUST00000049721 853 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps54Q5SPW0 Olfr414-201ENSMUST00000053178 955 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Vps54Q5SPW0 Smok2b-201ENSMUST00000059824 1584 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Vps54Q5SPW0 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps54Q5SPW0 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps54Q5SPW0 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps54Q5SPW0 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps54Q5SPW0 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Vps54Q5SPW0 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC12.92□□□□□ -0.34
Vps54Q5SPW0 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps54Q5SPW0 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC12.92□□□□□ -0.34
Vps54Q5SPW0 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps54Q5SPW0 Phf8-202ENSMUST00000046962 3105 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Vps54Q5SPW0 Zfp384-205ENSMUST00000112424 2673 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Vps54Q5SPW0 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC12.92□□□□□ -0.34
Vps54Q5SPW0 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Vps54Q5SPW0 Gm43052-201ENSMUST00000201451 1628 ntBASIC12.91□□□□□ -0.34
Vps54Q5SPW0 AC151836.1-201ENSMUST00000228730 1637 ntBASIC12.91□□□□□ -0.34
Vps54Q5SPW0 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Vps54Q5SPW0 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Vps54Q5SPW0 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps54Q5SPW0 Morf4l2-213ENSMUST00000166478 1720 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Vps54Q5SPW0 CT010480.4-201ENSMUST00000224654 2283 ntBASIC12.91□□□□□ -0.34
Vps54Q5SPW0 Gm42463-201ENSMUST00000198041 4886 ntBASIC12.91□□□□□ -0.34
Vps54Q5SPW0 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps54Q5SPW0 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps54Q5SPW0 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps54Q5SPW0 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC12.91□□□□□ -0.34
Vps54Q5SPW0 A830018L16Rik-209ENSMUST00000179089 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps54Q5SPW0 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps54Q5SPW0 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps54Q5SPW0 Adig-202ENSMUST00000109484 488 ntTSL 2 BASIC12.91□□□□□ -0.34
Vps54Q5SPW0 Camk2a-204ENSMUST00000115295 979 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Vps54Q5SPW0 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC12.91□□□□□ -0.34
Vps54Q5SPW0 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Vps54Q5SPW0 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC12.91□□□□□ -0.34
Vps54Q5SPW0 Gm12688-201ENSMUST00000136525 701 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Vps54Q5SPW0 Platr12-201ENSMUST00000141027 462 ntTSL 3 BASIC12.91□□□□□ -0.34
Vps54Q5SPW0 Gm16263-201ENSMUST00000144680 502 ntTSL 3 BASIC12.91□□□□□ -0.34
Vps54Q5SPW0 Gm16226-204ENSMUST00000162639 423 ntTSL 3 BASIC12.91□□□□□ -0.34
Vps54Q5SPW0 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC12.91□□□□□ -0.34
Vps54Q5SPW0 Gm4858-201ENSMUST00000179064 735 ntTSL 5 BASIC12.91□□□□□ -0.34
Vps54Q5SPW0 Gm37723-201ENSMUST00000194480 565 ntBASIC12.91□□□□□ -0.34
Vps54Q5SPW0 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps54Q5SPW0 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC12.91□□□□□ -0.34
Vps54Q5SPW0 Btg4-203ENSMUST00000213680 1282 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Vps54Q5SPW0 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Vps54Q5SPW0 CT030195.2-201ENSMUST00000226074 1286 ntBASIC12.91□□□□□ -0.34
Vps54Q5SPW0 AC154407.1-201ENSMUST00000226777 526 ntBASIC12.91□□□□□ -0.34
Vps54Q5SPW0 AC158986.2-201ENSMUST00000227487 618 ntBASIC12.91□□□□□ -0.34
Vps54Q5SPW0 Rab29-201ENSMUST00000027693 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms