Protein–RNA interactions for Protein: Q02789

Cacna1s, Voltage-dependent L-type calcium channel subunit alpha-1S, mousemouse

Predictions only

Length 1,880 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1sQ02789 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cacna1sQ02789 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cacna1sQ02789 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cacna1sQ02789 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cacna1sQ02789 Gm13361-201ENSMUST00000119977 1431 ntBASIC13.39□□□□□ -0.27
Cacna1sQ02789 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cacna1sQ02789 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cacna1sQ02789 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Cacna1sQ02789 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cacna1sQ02789 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cacna1sQ02789 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cacna1sQ02789 Gm42480-201ENSMUST00000198434 2595 ntBASIC13.38□□□□□ -0.27
Cacna1sQ02789 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cacna1sQ02789 Gm13623-201ENSMUST00000118359 625 ntBASIC13.38□□□□□ -0.27
Cacna1sQ02789 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cacna1sQ02789 Pkib-204ENSMUST00000175852 731 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cacna1sQ02789 Smarce1-ps1-201ENSMUST00000180067 1077 ntBASIC13.38□□□□□ -0.27
Cacna1sQ02789 Gm6069-201ENSMUST00000196501 463 ntBASIC13.38□□□□□ -0.27
Cacna1sQ02789 Gm32567-201ENSMUST00000211244 682 ntTSL 5 BASIC13.38□□□□□ -0.27
Cacna1sQ02789 Gm34237-201ENSMUST00000220575 1257 ntTSL 5 BASIC13.38□□□□□ -0.27
Cacna1sQ02789 Rpp30-201ENSMUST00000025714 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cacna1sQ02789 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cacna1sQ02789 Npm1-202ENSMUST00000093201 1192 ntTSL 5 BASIC13.38□□□□□ -0.27
Cacna1sQ02789 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.38□□□□□ -0.27
Cacna1sQ02789 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cacna1sQ02789 Pla2g2d-201ENSMUST00000030528 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cacna1sQ02789 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Cacna1sQ02789 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cacna1sQ02789 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Cacna1sQ02789 Gm26658-201ENSMUST00000181067 2500 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cacna1sQ02789 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cacna1sQ02789 Ces1a-201ENSMUST00000095211 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cacna1sQ02789 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cacna1sQ02789 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cacna1sQ02789 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Cacna1sQ02789 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cacna1sQ02789 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cacna1sQ02789 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cacna1sQ02789 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cacna1sQ02789 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Cacna1sQ02789 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cacna1sQ02789 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cacna1sQ02789 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cacna1sQ02789 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Cacna1sQ02789 CT009713.3-201ENSMUST00000224987 1565 ntBASIC13.38□□□□□ -0.27
Cacna1sQ02789 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Cacna1sQ02789 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.38□□□□□ -0.27
Cacna1sQ02789 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cacna1sQ02789 Rhox10-201ENSMUST00000115150 763 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cacna1sQ02789 Gm11546-201ENSMUST00000120297 354 ntBASIC13.38□□□□□ -0.27
Cacna1sQ02789 Gm7180-201ENSMUST00000121753 513 ntBASIC13.38□□□□□ -0.27
Cacna1sQ02789 Pon1-203ENSMUST00000176945 619 ntTSL 5 BASIC13.38□□□□□ -0.27
Cacna1sQ02789 2210039B01Rik-201ENSMUST00000222490 1044 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cacna1sQ02789 AC153380.1-201ENSMUST00000214959 2364 ntBASIC13.38□□□□□ -0.27
Cacna1sQ02789 Ccdc173-201ENSMUST00000094942 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cacna1sQ02789 Olfr30-202ENSMUST00000215691 2404 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Cacna1sQ02789 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cacna1sQ02789 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Cacna1sQ02789 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cacna1sQ02789 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cacna1sQ02789 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cacna1sQ02789 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Cacna1sQ02789 Gm13472-201ENSMUST00000120948 314 ntBASIC13.37□□□□□ -0.27
Cacna1sQ02789 Gm15580-201ENSMUST00000121587 556 ntBASIC13.37□□□□□ -0.27
Cacna1sQ02789 1700057H15Rik-202ENSMUST00000143859 704 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cacna1sQ02789 Gm3617-201ENSMUST00000173076 555 ntBASIC13.37□□□□□ -0.27
Cacna1sQ02789 Gm43761-201ENSMUST00000202132 991 ntBASIC13.37□□□□□ -0.27
Cacna1sQ02789 Hbq1a-201ENSMUST00000020535 604 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cacna1sQ02789 Flt3l-210ENSMUST00000211246 852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cacna1sQ02789 AC100406.1-201ENSMUST00000217305 480 ntBASIC13.37□□□□□ -0.27
Cacna1sQ02789 Gm19045-201ENSMUST00000222488 1193 ntBASIC13.37□□□□□ -0.27
Cacna1sQ02789 Tmem89-201ENSMUST00000026744 538 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cacna1sQ02789 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cacna1sQ02789 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Cacna1sQ02789 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Cacna1sQ02789 Pax5-202ENSMUST00000102932 1460 ntTSL 5 BASIC13.37□□□□□ -0.27
Cacna1sQ02789 Gm10465-201ENSMUST00000223133 3334 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cacna1sQ02789 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Cacna1sQ02789 Wdr20rt-202ENSMUST00000221658 1570 ntTSL 5 BASIC13.37□□□□□ -0.27
Cacna1sQ02789 Ube2q1-202ENSMUST00000196726 1650 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cacna1sQ02789 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cacna1sQ02789 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cacna1sQ02789 Ces1e-203ENSMUST00000176282 1883 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Cacna1sQ02789 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cacna1sQ02789 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cacna1sQ02789 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Cacna1sQ02789 Pbdc1-202ENSMUST00000119477 1239 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cacna1sQ02789 Gm14407-201ENSMUST00000121260 447 ntBASIC13.36□□□□□ -0.27
Cacna1sQ02789 4933406K04Rik-201ENSMUST00000124068 1136 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cacna1sQ02789 Gm29617-201ENSMUST00000185730 610 ntBASIC13.36□□□□□ -0.27
Cacna1sQ02789 Gm29651-201ENSMUST00000189088 697 ntBASIC13.36□□□□□ -0.27
Cacna1sQ02789 Gm26930-201ENSMUST00000194874 1244 ntBASIC13.36□□□□□ -0.27
Cacna1sQ02789 Gm43628-201ENSMUST00000197871 1187 ntBASIC13.36□□□□□ -0.27
Cacna1sQ02789 Gm44155-201ENSMUST00000203923 412 ntBASIC13.36□□□□□ -0.27
Cacna1sQ02789 Gm45521-201ENSMUST00000211339 676 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Cacna1sQ02789 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cacna1sQ02789 Gm35412-201ENSMUST00000220437 999 ntBASIC13.36□□□□□ -0.27
Cacna1sQ02789 Aqp7-202ENSMUST00000054945 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cacna1sQ02789 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cacna1sQ02789 Pdha2-201ENSMUST00000057860 2352 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms