Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Atp5s-201ENSMUST00000021372 1485 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcc1P97496 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcc1P97496 Slc1a4-202ENSMUST00000109594 3926 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcc1P97496 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC13.54□□□□□ -0.24
Smarcc1P97496 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Smarcc1P97496 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Smarcc1P97496 Cdca8-202ENSMUST00000084296 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smarcc1P97496 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Smarcc1P97496 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Smarcc1P97496 Gad1-ps-201ENSMUST00000167243 1776 ntBASIC13.53□□□□□ -0.24
Smarcc1P97496 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Smarcc1P97496 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Smarcc1P97496 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smarcc1P97496 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smarcc1P97496 Ighv1-62-3-201ENSMUST00000103532 405 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Smarcc1P97496 Gm14633-201ENSMUST00000121152 470 ntBASIC13.53□□□□□ -0.24
Smarcc1P97496 Ttc39b-206ENSMUST00000148811 727 ntTSL 3 BASIC13.53□□□□□ -0.24
Smarcc1P97496 Gm23432-201ENSMUST00000157181 131 ntBASIC13.53□□□□□ -0.24
Smarcc1P97496 Gm7211-201ENSMUST00000172692 1118 ntBASIC13.53□□□□□ -0.24
Smarcc1P97496 Gm22876-201ENSMUST00000175450 298 ntBASIC13.53□□□□□ -0.24
Smarcc1P97496 Gm21631-201ENSMUST00000195041 754 ntBASIC13.53□□□□□ -0.24
Smarcc1P97496 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC13.53□□□□□ -0.24
Smarcc1P97496 Gm37885-202ENSMUST00000195868 685 ntTSL 3 BASIC13.53□□□□□ -0.24
Smarcc1P97496 Gm5650-201ENSMUST00000209641 598 ntBASIC13.53□□□□□ -0.24
Smarcc1P97496 AC139155.1-201ENSMUST00000226043 444 ntBASIC13.53□□□□□ -0.24
Smarcc1P97496 Gm8618-201ENSMUST00000097570 432 ntBASIC13.53□□□□□ -0.24
Smarcc1P97496 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Smarcc1P97496 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Smarcc1P97496 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smarcc1P97496 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC13.53□□□□□ -0.24
Smarcc1P97496 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC13.53□□□□□ -0.24
Smarcc1P97496 Nxpe1-ps-201ENSMUST00000209981 1454 ntBASIC13.53□□□□□ -0.24
Smarcc1P97496 Gpr19-213ENSMUST00000215088 1484 ntTSL 5 BASIC13.53□□□□□ -0.24
Smarcc1P97496 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smarcc1P97496 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Smarcc1P97496 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC13.53□□□□□ -0.24
Smarcc1P97496 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smarcc1P97496 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Smarcc1P97496 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Smarcc1P97496 AC124561.1-202ENSMUST00000228652 1929 ntBASIC13.52□□□□□ -0.24
Smarcc1P97496 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
Smarcc1P97496 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC13.52□□□□□ -0.24
Smarcc1P97496 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Smarcc1P97496 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
Smarcc1P97496 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Smarcc1P97496 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC13.52□□□□□ -0.24
Smarcc1P97496 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Smarcc1P97496 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Smarcc1P97496 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC13.52□□□□□ -0.25
Smarcc1P97496 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Smarcc1P97496 Il15ra-203ENSMUST00000114831 882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Smarcc1P97496 Gm6517-201ENSMUST00000121056 511 ntBASIC13.52□□□□□ -0.25
Smarcc1P97496 Gm15793-201ENSMUST00000121857 495 ntBASIC13.52□□□□□ -0.25
Smarcc1P97496 Gm15015-201ENSMUST00000135491 636 ntTSL 3 BASIC13.52□□□□□ -0.25
Smarcc1P97496 Gm11521-201ENSMUST00000143302 329 ntTSL 3 BASIC13.52□□□□□ -0.25
Smarcc1P97496 Gm15020-201ENSMUST00000147142 636 ntTSL 3 BASIC13.52□□□□□ -0.25
Smarcc1P97496 2010204K13Rik-203ENSMUST00000150671 885 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Smarcc1P97496 Itgb1bp1-202ENSMUST00000172834 801 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Smarcc1P97496 Mok-204ENSMUST00000177224 551 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Smarcc1P97496 Gm26750-201ENSMUST00000181718 711 ntTSL 5 BASIC13.52□□□□□ -0.25
Smarcc1P97496 Gm7255-201ENSMUST00000187371 908 ntBASIC13.52□□□□□ -0.25
Smarcc1P97496 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Smarcc1P97496 Gm44236-201ENSMUST00000204492 513 ntBASIC13.52□□□□□ -0.25
Smarcc1P97496 Mylpf-206ENSMUST00000206772 653 ntTSL 3 BASIC13.52□□□□□ -0.25
Smarcc1P97496 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC13.52□□□□□ -0.25
Smarcc1P97496 AC102569.1-201ENSMUST00000221563 685 ntBASIC13.52□□□□□ -0.25
Smarcc1P97496 Gm34667-201ENSMUST00000222974 1258 ntTSL 5 BASIC13.52□□□□□ -0.25
Smarcc1P97496 CU025215.1-201ENSMUST00000222986 603 ntBASIC13.52□□□□□ -0.25
Smarcc1P97496 AC165092.1-201ENSMUST00000224018 486 ntBASIC13.52□□□□□ -0.25
Smarcc1P97496 AC163646.3-202ENSMUST00000228685 691 ntBASIC13.52□□□□□ -0.25
Smarcc1P97496 Supt4a-201ENSMUST00000093955 706 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Smarcc1P97496 Gm6304-201ENSMUST00000096579 447 ntBASIC13.52□□□□□ -0.25
Smarcc1P97496 Gstm3-201ENSMUST00000004136 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Smarcc1P97496 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Smarcc1P97496 Als2cr12-206ENSMUST00000191565 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Smarcc1P97496 Igsf11-202ENSMUST00000114706 1578 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Smarcc1P97496 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Smarcc1P97496 Gm30504-201ENSMUST00000209316 1688 ntTSL 5 BASIC13.52□□□□□ -0.25
Smarcc1P97496 Myc-204ENSMUST00000160009 1765 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Smarcc1P97496 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC13.52□□□□□ -0.25
Smarcc1P97496 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Smarcc1P97496 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Smarcc1P97496 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Smarcc1P97496 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Smarcc1P97496 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Smarcc1P97496 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Smarcc1P97496 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Smarcc1P97496 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcc1P97496 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Smarcc1P97496 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcc1P97496 Hsf2-204ENSMUST00000220042 2430 ntTSL 5 BASIC13.51□□□□□ -0.25
Smarcc1P97496 Gm37264-201ENSMUST00000194916 2192 ntBASIC13.51□□□□□ -0.25
Smarcc1P97496 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Smarcc1P97496 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Smarcc1P97496 Rep15-201ENSMUST00000036194 1662 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Smarcc1P97496 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Smarcc1P97496 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcc1P97496 Gm15373-201ENSMUST00000121495 214 ntBASIC13.51□□□□□ -0.25
Smarcc1P97496 Gast-201ENSMUST00000017309 460 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Smarcc1P97496 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms