Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Hmgb1P63158 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hmgb1P63158 Kif4-201ENSMUST00000048962 4983 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hmgb1P63158 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hmgb1P63158 Zfp110-201ENSMUST00000004614 3591 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hmgb1P63158 Aff1-201ENSMUST00000031256 8312 ntAPPRIS P4 TSL 5 BASIC11.94□□□□□ -0.5
Hmgb1P63158 Npy1r-201ENSMUST00000039303 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hmgb1P63158 Fanca-202ENSMUST00000118395 3274 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Hmgb1P63158 Pear1-201ENSMUST00000029714 4260 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Hmgb1P63158 Pigo-202ENSMUST00000098109 4239 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Hmgb1P63158 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Hmgb1P63158 Tram2-201ENSMUST00000037998 6492 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hmgb1P63158 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hmgb1P63158 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Hmgb1P63158 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hmgb1P63158 Gm26818-201ENSMUST00000181367 1360 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Hmgb1P63158 St7-204ENSMUST00000077080 1887 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Hmgb1P63158 Tmem154-201ENSMUST00000107682 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hmgb1P63158 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Hmgb1P63158 Spns3-201ENSMUST00000021154 1804 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Hmgb1P63158 Ywhaz-201ENSMUST00000022894 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hmgb1P63158 Dusp11-201ENSMUST00000032071 6435 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hmgb1P63158 Gm6024-201ENSMUST00000117850 1558 ntBASIC11.93□□□□□ -0.5
Hmgb1P63158 Pcdhga7-201ENSMUST00000192511 4730 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hmgb1P63158 Gm6641-201ENSMUST00000196100 1315 ntBASIC11.93□□□□□ -0.5
Hmgb1P63158 Gm8899-201ENSMUST00000214635 1332 ntBASIC11.93□□□□□ -0.5
Hmgb1P63158 Psat1-205ENSMUST00000162053 2291 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Hmgb1P63158 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Hmgb1P63158 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hmgb1P63158 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hmgb1P63158 Ttc39a-202ENSMUST00000106618 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hmgb1P63158 Sema4g-201ENSMUST00000026225 4548 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hmgb1P63158 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Hmgb1P63158 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Hmgb1P63158 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Hmgb1P63158 Gm20614-201ENSMUST00000177106 632 ntBASIC11.93□□□□□ -0.5
Hmgb1P63158 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
Hmgb1P63158 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC11.93□□□□□ -0.5
Hmgb1P63158 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC11.93□□□□□ -0.5
Hmgb1P63158 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC11.93□□□□□ -0.5
Hmgb1P63158 Gm43163-201ENSMUST00000196571 442 ntBASIC11.93□□□□□ -0.5
Hmgb1P63158 Gm40414-201ENSMUST00000197608 481 ntBASIC11.93□□□□□ -0.5
Hmgb1P63158 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC11.93□□□□□ -0.5
Hmgb1P63158 Gm43378-201ENSMUST00000199336 582 ntBASIC11.93□□□□□ -0.5
Hmgb1P63158 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC11.93□□□□□ -0.5
Hmgb1P63158 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Hmgb1P63158 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC11.93□□□□□ -0.5
Hmgb1P63158 Gm4797-201ENSMUST00000219075 1283 ntBASIC11.93□□□□□ -0.5
Hmgb1P63158 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC11.93□□□□□ -0.5
Hmgb1P63158 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Hmgb1P63158 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Hmgb1P63158 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hmgb1P63158 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC11.93□□□□□ -0.5
Hmgb1P63158 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC11.93□□□□□ -0.5
Hmgb1P63158 Gm43597-202ENSMUST00000201992 4620 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Hmgb1P63158 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hmgb1P63158 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hmgb1P63158 Olfr169-204ENSMUST00000216070 2328 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Hmgb1P63158 Ddr1-201ENSMUST00000003628 3802 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hmgb1P63158 4930552P12Rik-201ENSMUST00000181198 2496 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Hmgb1P63158 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Hmgb1P63158 Gm19027-201ENSMUST00000187291 1355 ntBASIC11.92□□□□□ -0.5
Hmgb1P63158 Clcn6-205ENSMUST00000137724 5198 ntAPPRIS ALT1 TSL 5 BASIC11.92□□□□□ -0.5
Hmgb1P63158 Gm12829-201ENSMUST00000146346 2434 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Hmgb1P63158 Gpr149-201ENSMUST00000058535 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hmgb1P63158 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hmgb1P63158 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hmgb1P63158 Hrh1-201ENSMUST00000088987 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hmgb1P63158 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Hmgb1P63158 Ap1m2-201ENSMUST00000003397 1706 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hmgb1P63158 Slc25a12-206ENSMUST00000151937 6351 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hmgb1P63158 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hmgb1P63158 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hmgb1P63158 Prox1-203ENSMUST00000177288 3144 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Hmgb1P63158 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hmgb1P63158 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Hmgb1P63158 Gm12663-201ENSMUST00000118481 958 ntBASIC11.92□□□□□ -0.5
Hmgb1P63158 Gm15197-201ENSMUST00000120526 478 ntBASIC11.92□□□□□ -0.5
Hmgb1P63158 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hmgb1P63158 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC11.92□□□□□ -0.5
Hmgb1P63158 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC11.92□□□□□ -0.5
Hmgb1P63158 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hmgb1P63158 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC11.92□□□□□ -0.5
Hmgb1P63158 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC11.92□□□□□ -0.5
Hmgb1P63158 Gm6098-201ENSMUST00000180234 330 ntBASIC11.92□□□□□ -0.5
Hmgb1P63158 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Hmgb1P63158 Gm4812-201ENSMUST00000182847 993 ntBASIC11.92□□□□□ -0.5
Hmgb1P63158 Gm19015-201ENSMUST00000184002 1189 ntBASIC11.92□□□□□ -0.5
Hmgb1P63158 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC11.92□□□□□ -0.5
Hmgb1P63158 Gm4959-201ENSMUST00000197271 1044 ntBASIC11.92□□□□□ -0.5
Hmgb1P63158 Nme6-206ENSMUST00000197627 905 ntTSL 3 BASIC11.92□□□□□ -0.5
Hmgb1P63158 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC11.92□□□□□ -0.5
Hmgb1P63158 Gm31941-201ENSMUST00000209689 350 ntBASIC11.92□□□□□ -0.5
Hmgb1P63158 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC11.92□□□□□ -0.5
Hmgb1P63158 CT009527.1-201ENSMUST00000224205 339 ntBASIC11.92□□□□□ -0.5
Hmgb1P63158 AC171241.1-201ENSMUST00000228144 1166 ntBASIC11.92□□□□□ -0.5
Hmgb1P63158 B630019A10Rik-201ENSMUST00000149488 2407 ntTSL 2 BASIC11.92□□□□□ -0.5
Hmgb1P63158 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Hmgb1P63158 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Hmgb1P63158 Gabrr2-201ENSMUST00000024035 1820 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms