Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Gm44415-201ENSMUST00000204151 2112 ntBASIC11.08□□□□□ -0.64
Ybx1P62960 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ybx1P62960 Etv1-205ENSMUST00000160856 1474 ntTSL 5 BASIC11.08□□□□□ -0.64
Ybx1P62960 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ybx1P62960 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ybx1P62960 Cd247-205ENSMUST00000161559 1816 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ybx1P62960 Gm36957-201ENSMUST00000192982 2824 ntBASIC11.08□□□□□ -0.64
Ybx1P62960 Gm15506-201ENSMUST00000148776 1133 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ybx1P62960 Platr17-201ENSMUST00000172817 807 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ybx1P62960 Tcl1-203ENSMUST00000175652 535 ntTSL 2 BASIC11.08□□□□□ -0.64
Ybx1P62960 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC11.08□□□□□ -0.64
Ybx1P62960 Ndufc1-204ENSMUST00000193279 315 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
Ybx1P62960 Rpl13-ps4-201ENSMUST00000194776 628 ntBASIC11.08□□□□□ -0.64
Ybx1P62960 Gm37688-201ENSMUST00000195195 465 ntBASIC11.08□□□□□ -0.64
Ybx1P62960 Gm3527-201ENSMUST00000198905 460 ntBASIC11.08□□□□□ -0.64
Ybx1P62960 Gm42732-201ENSMUST00000202887 1197 ntBASIC11.08□□□□□ -0.64
Ybx1P62960 Ghrl-203ENSMUST00000203588 237 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ybx1P62960 4930486N12Rik-201ENSMUST00000206668 632 ntBASIC11.08□□□□□ -0.64
Ybx1P62960 4930546C10Rik-201ENSMUST00000025428 363 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Ybx1P62960 Ggta1-201ENSMUST00000044255 1221 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.64
Ybx1P62960 4930553M12Rik-201ENSMUST00000057837 498 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Ybx1P62960 Vps25-201ENSMUST00000007533 615 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ybx1P62960 AU016765-201ENSMUST00000097295 946 ntTSL 2 BASIC11.08□□□□□ -0.64
Ybx1P62960 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ybx1P62960 B4galnt2-201ENSMUST00000038343 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ybx1P62960 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ybx1P62960 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ybx1P62960 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ybx1P62960 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC11.08□□□□□ -0.64
Ybx1P62960 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Ybx1P62960 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ybx1P62960 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ybx1P62960 Pole-202ENSMUST00000112481 1523 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ybx1P62960 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.64
Ybx1P62960 Plut-202ENSMUST00000174285 1444 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ybx1P62960 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
Ybx1P62960 Stx17-203ENSMUST00000107721 1771 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ybx1P62960 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ybx1P62960 Msl1-202ENSMUST00000037930 1303 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ybx1P62960 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Ybx1P62960 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Ybx1P62960 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Ybx1P62960 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ybx1P62960 Gm43522-201ENSMUST00000196697 1922 ntBASIC11.07□□□□□ -0.64
Ybx1P62960 Gm37031-201ENSMUST00000195487 2530 ntBASIC11.07□□□□□ -0.64
Ybx1P62960 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ybx1P62960 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ybx1P62960 AC159810.1-201ENSMUST00000214838 1480 ntBASIC11.07□□□□□ -0.64
Ybx1P62960 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ybx1P62960 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ybx1P62960 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC11.07□□□□□ -0.64
Ybx1P62960 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ybx1P62960 Srd5a3-203ENSMUST00000113507 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ybx1P62960 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Ybx1P62960 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ybx1P62960 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ybx1P62960 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
Ybx1P62960 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ybx1P62960 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ybx1P62960 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ybx1P62960 Gm6755-201ENSMUST00000100598 864 ntBASIC11.07□□□□□ -0.64
Ybx1P62960 Gm6740-201ENSMUST00000100617 864 ntBASIC11.07□□□□□ -0.64
Ybx1P62960 1700011M02Rik-201ENSMUST00000113602 420 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ybx1P62960 Gm24140-201ENSMUST00000122773 326 ntBASIC11.07□□□□□ -0.64
Ybx1P62960 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC11.07□□□□□ -0.64
Ybx1P62960 Gm45716-201ENSMUST00000124877 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ybx1P62960 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC11.07□□□□□ -0.64
Ybx1P62960 Gm13857-201ENSMUST00000139645 173 ntBASIC11.07□□□□□ -0.64
Ybx1P62960 St8sia3os-204ENSMUST00000140903 383 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ybx1P62960 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Ybx1P62960 E230034D01Rik-203ENSMUST00000217357 1159 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ybx1P62960 AC154585.1-201ENSMUST00000218917 997 ntBASIC11.07□□□□□ -0.64
Ybx1P62960 Gm19990-201ENSMUST00000219468 1224 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ybx1P62960 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC11.07□□□□□ -0.64
Ybx1P62960 AC134913.2-201ENSMUST00000225017 771 ntBASIC11.07□□□□□ -0.64
Ybx1P62960 CT025679.1-201ENSMUST00000227106 449 ntBASIC11.07□□□□□ -0.64
Ybx1P62960 Tbc1d21-201ENSMUST00000040217 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ybx1P62960 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ybx1P62960 Mrgpra1-201ENSMUST00000098438 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ybx1P62960 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ybx1P62960 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Ybx1P62960 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ybx1P62960 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC11.07□□□□□ -0.64
Ybx1P62960 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ybx1P62960 AC166361.2-201ENSMUST00000219269 1415 ntBASIC11.07□□□□□ -0.64
Ybx1P62960 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ybx1P62960 Hectd2os-203ENSMUST00000142067 2662 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Ybx1P62960 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Ybx1P62960 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ybx1P62960 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.07□□□□□ -0.64
Ybx1P62960 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ybx1P62960 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ybx1P62960 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ybx1P62960 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ybx1P62960 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Ybx1P62960 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ybx1P62960 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.06□□□□□ -0.64
Ybx1P62960 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Ybx1P62960 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Ybx1P62960 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms