Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vcam1P29533 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vcam1P29533 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vcam1P29533 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Vcam1P29533 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vcam1P29533 Gm26658-201ENSMUST00000181067 2500 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vcam1P29533 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vcam1P29533 Armcx3-203ENSMUST00000086884 3488 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Vcam1P29533 Gm44913-201ENSMUST00000208060 2990 ntBASIC12.36□□□□□ -0.43
Vcam1P29533 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vcam1P29533 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vcam1P29533 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Vcam1P29533 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Vcam1P29533 Bcl2l1-206ENSMUST00000140436 1865 ntTSL 2 BASIC12.36□□□□□ -0.43
Vcam1P29533 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vcam1P29533 Gm22582-201ENSMUST00000102283 94 ntBASIC12.36□□□□□ -0.43
Vcam1P29533 Mir181d-201ENSMUST00000102383 72 ntBASIC12.36□□□□□ -0.43
Vcam1P29533 Klra9-202ENSMUST00000112032 1279 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vcam1P29533 Rab29-202ENSMUST00000112386 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vcam1P29533 Atp5e-201ENSMUST00000016396 421 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vcam1P29533 Gm4705-201ENSMUST00000177415 354 ntBASIC12.36□□□□□ -0.43
Vcam1P29533 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC12.36□□□□□ -0.43
Vcam1P29533 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC12.36□□□□□ -0.43
Vcam1P29533 Cpsf4l-201ENSMUST00000018871 1235 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Vcam1P29533 Gm29157-201ENSMUST00000188753 612 ntBASIC12.36□□□□□ -0.43
Vcam1P29533 Gm37229-201ENSMUST00000191643 732 ntTSL 3 BASIC12.36□□□□□ -0.43
Vcam1P29533 Gm37858-201ENSMUST00000192759 1231 ntBASIC12.36□□□□□ -0.43
Vcam1P29533 Gm19566-201ENSMUST00000199576 610 ntBASIC12.36□□□□□ -0.43
Vcam1P29533 Rarres2-203ENSMUST00000204182 672 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Vcam1P29533 AC113291.2-201ENSMUST00000215490 1205 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Vcam1P29533 Gm7242-201ENSMUST00000221134 705 ntBASIC12.36□□□□□ -0.43
Vcam1P29533 Klra9-201ENSMUST00000071554 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vcam1P29533 Klk1b24-201ENSMUST00000073713 878 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vcam1P29533 Gm22341-201ENSMUST00000083775 129 ntBASIC12.36□□□□□ -0.43
Vcam1P29533 Klk1b21-201ENSMUST00000085455 871 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vcam1P29533 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Vcam1P29533 Srp14-201ENSMUST00000009693 798 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vcam1P29533 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Vcam1P29533 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vcam1P29533 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vcam1P29533 Bckdk-207ENSMUST00000206745 1702 ntTSL 5 BASIC12.36□□□□□ -0.43
Vcam1P29533 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vcam1P29533 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vcam1P29533 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Vcam1P29533 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Vcam1P29533 Gm43625-201ENSMUST00000199177 1539 ntBASIC12.36□□□□□ -0.43
Vcam1P29533 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vcam1P29533 4930447F24Rik-201ENSMUST00000194140 1341 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Vcam1P29533 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vcam1P29533 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vcam1P29533 Gm10537-201ENSMUST00000192625 1698 ntBASIC12.35□□□□□ -0.43
Vcam1P29533 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Vcam1P29533 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Vcam1P29533 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vcam1P29533 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC12.35□□□□□ -0.43
Vcam1P29533 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Vcam1P29533 Vbp1-201ENSMUST00000033540 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vcam1P29533 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Vcam1P29533 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vcam1P29533 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Vcam1P29533 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Vcam1P29533 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vcam1P29533 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Vcam1P29533 Smpd4-218ENSMUST00000170273 2166 ntTSL 5 BASIC12.35□□□□□ -0.43
Vcam1P29533 Gm31138-201ENSMUST00000212296 1705 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Vcam1P29533 Gcg-201ENSMUST00000102733 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vcam1P29533 Mrps36-203ENSMUST00000109333 701 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vcam1P29533 Tpm1-205ENSMUST00000113685 1208 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vcam1P29533 Rpsa-ps5-201ENSMUST00000121462 885 ntBASIC12.35□□□□□ -0.43
Vcam1P29533 Rplp0-ps1-201ENSMUST00000122125 933 ntBASIC12.35□□□□□ -0.43
Vcam1P29533 Gm4943-201ENSMUST00000132879 424 ntBASIC12.35□□□□□ -0.43
Vcam1P29533 Gm12207-201ENSMUST00000143016 494 ntTSL 2 BASIC12.35□□□□□ -0.43
Vcam1P29533 Gm24294-201ENSMUST00000158295 277 ntBASIC12.35□□□□□ -0.43
Vcam1P29533 4930524O07Rik-202ENSMUST00000162334 293 ntTSL 2 BASIC12.35□□□□□ -0.43
Vcam1P29533 Rian-210ENSMUST00000182689 295 ntTSL 5 BASIC12.35□□□□□ -0.43
Vcam1P29533 Gm37141-201ENSMUST00000191938 422 ntBASIC12.35□□□□□ -0.43
Vcam1P29533 Gm2345-201ENSMUST00000193451 589 ntBASIC12.35□□□□□ -0.43
Vcam1P29533 Gm33707-201ENSMUST00000195135 569 ntBASIC12.35□□□□□ -0.43
Vcam1P29533 Gm44388-201ENSMUST00000204350 258 ntBASIC12.35□□□□□ -0.43
Vcam1P29533 Gm5738-201ENSMUST00000206016 779 ntBASIC12.35□□□□□ -0.43
Vcam1P29533 Gm45363-201ENSMUST00000210196 1294 ntBASIC12.35□□□□□ -0.43
Vcam1P29533 Gm45308-201ENSMUST00000210610 415 ntBASIC12.35□□□□□ -0.43
Vcam1P29533 Gm7904-201ENSMUST00000217049 465 ntBASIC12.35□□□□□ -0.43
Vcam1P29533 Isca2-206ENSMUST00000222449 374 ntTSL 2 BASIC12.35□□□□□ -0.43
Vcam1P29533 AC139155.1-201ENSMUST00000226043 444 ntBASIC12.35□□□□□ -0.43
Vcam1P29533 Cma1-202ENSMUST00000226280 1090 ntAPPRIS ALT2 BASIC12.35□□□□□ -0.43
Vcam1P29533 Cma1-201ENSMUST00000022834 1074 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vcam1P29533 Hormad2-202ENSMUST00000109948 1969 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Vcam1P29533 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vcam1P29533 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vcam1P29533 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Vcam1P29533 Gm32914-201ENSMUST00000203815 2228 ntBASIC12.35□□□□□ -0.43
Vcam1P29533 Plrg1-204ENSMUST00000150268 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vcam1P29533 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vcam1P29533 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vcam1P29533 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vcam1P29533 Gm12097-201ENSMUST00000121523 1414 ntBASIC12.35□□□□□ -0.43
Vcam1P29533 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Vcam1P29533 Gm36940-201ENSMUST00000194281 2036 ntBASIC12.35□□□□□ -0.43
Vcam1P29533 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms