Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Abr-204ENSMUST00000108407 4811 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
P04224 Rnf6-206ENSMUST00000161859 3452 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
P04224 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC9.44□□□□□ -0.9
P04224 Dach2-205ENSMUST00000113382 5155 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
P04224 Tmem106a-201ENSMUST00000039581 2304 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
P04224 Elf5-206ENSMUST00000164172 2532 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
P04224 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
P04224 Fubp1-201ENSMUST00000106121 4525 ntAPPRIS P2 TSL 2 BASIC9.44□□□□□ -0.9
P04224 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
P04224 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
P04224 Ticam1-201ENSMUST00000058136 2992 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
P04224 Zfp451-202ENSMUST00000044455 11876 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
P04224 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
P04224 Gm13996-201ENSMUST00000118456 430 ntBASIC9.44□□□□□ -0.9
P04224 Gm15711-201ENSMUST00000118889 535 ntBASIC9.44□□□□□ -0.9
P04224 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
P04224 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC9.44□□□□□ -0.9
P04224 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC9.44□□□□□ -0.9
P04224 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
P04224 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
P04224 Gm32111-201ENSMUST00000207689 846 ntBASIC9.44□□□□□ -0.9
P04224 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
P04224 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC9.44□□□□□ -0.9
P04224 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
P04224 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
P04224 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
P04224 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
P04224 Nbr1-203ENSMUST00000103099 4789 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
P04224 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
P04224 Gm3372-201ENSMUST00000198806 1792 ntBASIC9.44□□□□□ -0.9
P04224 Kif2b-201ENSMUST00000061019 2244 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
P04224 Casq2-205ENSMUST00000165540 2434 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
P04224 Gm9220-201ENSMUST00000190721 2544 ntBASIC9.44□□□□□ -0.9
P04224 Tmprss7-201ENSMUST00000114562 2587 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
P04224 Olfr1199-204ENSMUST00000213138 2657 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
P04224 Zfp54-202ENSMUST00000165230 2832 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
P04224 Mapkap1-203ENSMUST00000113126 3018 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
P04224 Rint1-203ENSMUST00000115113 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
P04224 Fam83c-201ENSMUST00000029143 3972 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
P04224 Atg4b-201ENSMUST00000027502 4173 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
P04224 Sipa1l1-210ENSMUST00000222714 6002 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
P04224 Dock7-201ENSMUST00000030286 7127 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
P04224 Arid1a-201ENSMUST00000008024 6486 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
P04224 Ppip5k1-201ENSMUST00000052029 5533 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
P04224 Pde10a-211ENSMUST00000149440 4897 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
P04224 Wnk4-201ENSMUST00000103108 4117 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
P04224 Bcas3-205ENSMUST00000108061 3810 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
P04224 Pear1-216ENSMUST00000174759 3554 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
P04224 Dcaf12l1-201ENSMUST00000060481 3509 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
P04224 Mov10-207ENSMUST00000168015 3460 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
P04224 Mov10-201ENSMUST00000002297 3498 ntAPPRIS ALT1 TSL 5 BASIC9.43□□□□□ -0.9
P04224 Grik4-201ENSMUST00000034515 3413 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
P04224 Osgep-202ENSMUST00000159292 3388 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
P04224 Skp2-201ENSMUST00000096482 3118 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
P04224 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
P04224 Hyal2-206ENSMUST00000195681 2968 ntBASIC9.43□□□□□ -0.9
P04224 Lrrc61-202ENSMUST00000114545 2913 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
P04224 Gpm6b-201ENSMUST00000060210 2858 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
P04224 Pogk-206ENSMUST00000169324 7034 ntAPPRIS ALT2 TSL 3 BASIC9.43□□□□□ -0.9
P04224 Hemgn-201ENSMUST00000071096 2321 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
P04224 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
P04224 Arhgap21-208ENSMUST00000141298 6339 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
P04224 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC9.43□□□□□ -0.9
P04224 Lrba-201ENSMUST00000107635 9888 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
P04224 Cct3-201ENSMUST00000001452 1977 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
P04224 Adgb-201ENSMUST00000045328 1893 ntTSL 2 BASIC9.43□□□□□ -0.9
P04224 Prdm16-204ENSMUST00000105636 8426 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
P04224 Prdm16-202ENSMUST00000070313 8429 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
P04224 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
P04224 Ppfibp1-202ENSMUST00000111623 4782 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
P04224 Gm20052-201ENSMUST00000200831 1525 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
P04224 Crispld1-201ENSMUST00000095075 4472 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
P04224 Fbxl5-202ENSMUST00000087465 4237 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
P04224 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
P04224 L1cam-201ENSMUST00000066576 4116 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
P04224 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
P04224 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC9.43□□□□□ -0.9
P04224 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
P04224 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
P04224 Gm14723-201ENSMUST00000118686 215 ntBASIC9.43□□□□□ -0.9
P04224 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
P04224 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC9.43□□□□□ -0.9
P04224 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
P04224 Cd63-ps-202ENSMUST00000154992 717 ntBASIC9.43□□□□□ -0.9
P04224 Gm24749-201ENSMUST00000157838 343 ntBASIC9.43□□□□□ -0.9
P04224 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
P04224 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC9.43□□□□□ -0.9
P04224 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
P04224 Gm25890-201ENSMUST00000177643 165 ntBASIC9.43□□□□□ -0.9
P04224 Rnu1b2-201ENSMUST00000178073 165 ntBASIC9.43□□□□□ -0.9
P04224 Rnu1b1-201ENSMUST00000178250 165 ntBASIC9.43□□□□□ -0.9
P04224 Gm22614-201ENSMUST00000178300 165 ntBASIC9.43□□□□□ -0.9
P04224 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
P04224 Gm21027-201ENSMUST00000219300 1236 ntBASIC9.43□□□□□ -0.9
P04224 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
P04224 Gm22042-201ENSMUST00000082989 165 ntBASIC9.43□□□□□ -0.9
P04224 Gm26110-201ENSMUST00000083971 165 ntBASIC9.43□□□□□ -0.9
P04224 Tmed5-205ENSMUST00000119437 3436 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
P04224 Ralgps2-203ENSMUST00000171292 3346 ntAPPRIS P3 TSL 5 BASIC9.43□□□□□ -0.9
P04224 Cish-201ENSMUST00000085102 2850 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms