Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc180J3QNE4 Gm45076-201ENSMUST00000207517 1517 ntTSL 5 BASIC19.42■□□□□ 0.7
Ccdc180J3QNE4 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
Ccdc180J3QNE4 AC154186.1-201ENSMUST00000227711 1597 ntBASIC19.42■□□□□ 0.7
Ccdc180J3QNE4 Adat1-201ENSMUST00000034427 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc180J3QNE4 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc180J3QNE4 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ccdc180J3QNE4 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC19.42■□□□□ 0.7
Ccdc180J3QNE4 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc180J3QNE4 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc180J3QNE4 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc180J3QNE4 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Ccdc180J3QNE4 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc180J3QNE4 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc180J3QNE4 Ighv1-62-3-201ENSMUST00000103532 405 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Ccdc180J3QNE4 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc180J3QNE4 Gm14571-201ENSMUST00000118292 570 ntBASIC19.41■□□□□ 0.7
Ccdc180J3QNE4 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc180J3QNE4 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc180J3QNE4 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Ccdc180J3QNE4 Zwilch-209ENSMUST00000176299 1831 ntTSL 5 BASIC19.41■□□□□ 0.7
Ccdc180J3QNE4 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc180J3QNE4 Mir7088-201ENSMUST00000184227 86 ntBASIC19.41■□□□□ 0.7
Ccdc180J3QNE4 1700030N03Rik-206ENSMUST00000191405 651 ntTSL 3 BASIC19.41■□□□□ 0.7
Ccdc180J3QNE4 Gm38321-201ENSMUST00000195053 235 ntBASIC19.41■□□□□ 0.7
Ccdc180J3QNE4 Rps27-202ENSMUST00000195998 458 ntTSL 5 BASIC19.41■□□□□ 0.7
Ccdc180J3QNE4 Gm44139-201ENSMUST00000204903 373 ntBASIC19.41■□□□□ 0.7
Ccdc180J3QNE4 AC122824.1-201ENSMUST00000221705 828 ntTSL 3 BASIC19.41■□□□□ 0.7
Ccdc180J3QNE4 CAAA01139602.1-201ENSMUST00000222545 283 ntBASIC19.41■□□□□ 0.7
Ccdc180J3QNE4 AC134860.5-201ENSMUST00000225071 1249 ntBASIC19.41■□□□□ 0.7
Ccdc180J3QNE4 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc180J3QNE4 Olfr414-201ENSMUST00000053178 955 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Ccdc180J3QNE4 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Ccdc180J3QNE4 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ccdc180J3QNE4 Gm10581-201ENSMUST00000097986 231 ntBASIC19.41■□□□□ 0.7
Ccdc180J3QNE4 CN725425-201ENSMUST00000109284 1929 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Ccdc180J3QNE4 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc180J3QNE4 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc180J3QNE4 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc180J3QNE4 Il10-201ENSMUST00000016673 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc180J3QNE4 Gm12420-201ENSMUST00000119869 1048 ntBASIC19.4■□□□□ 0.7
Ccdc180J3QNE4 Smt3h2-ps2-201ENSMUST00000122370 288 ntBASIC19.4■□□□□ 0.7
Ccdc180J3QNE4 Gm15976-201ENSMUST00000129701 429 ntTSL 3 BASIC19.4■□□□□ 0.7
Ccdc180J3QNE4 Gm3052-201ENSMUST00000186409 829 ntBASIC19.4■□□□□ 0.7
Ccdc180J3QNE4 Gm37141-201ENSMUST00000191938 422 ntBASIC19.4■□□□□ 0.7
Ccdc180J3QNE4 AC114585.2-201ENSMUST00000227693 486 ntBASIC19.4■□□□□ 0.7
Ccdc180J3QNE4 Xlr4b-201ENSMUST00000069077 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc180J3QNE4 Gm32914-201ENSMUST00000203815 2228 ntBASIC19.4■□□□□ 0.7
Ccdc180J3QNE4 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc180J3QNE4 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc180J3QNE4 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc180J3QNE4 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc180J3QNE4 Cdc42-202ENSMUST00000051477 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc180J3QNE4 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc180J3QNE4 Gm15599-201ENSMUST00000122283 1345 ntBASIC19.4■□□□□ 0.7
Ccdc180J3QNE4 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc180J3QNE4 Gm15476-201ENSMUST00000118247 1191 ntBASIC19.4■□□□□ 0.7
Ccdc180J3QNE4 Gm13781-201ENSMUST00000124153 492 ntTSL 2 BASIC19.4■□□□□ 0.7
Ccdc180J3QNE4 Gm13898-201ENSMUST00000141865 610 ntBASIC19.4■□□□□ 0.7
Ccdc180J3QNE4 Gm25154-201ENSMUST00000157123 119 ntBASIC19.4■□□□□ 0.7
Ccdc180J3QNE4 Gm17225-201ENSMUST00000172051 497 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ccdc180J3QNE4 Gm17799-201ENSMUST00000183270 667 ntBASIC19.4■□□□□ 0.7
Ccdc180J3QNE4 Gm38103-201ENSMUST00000191707 864 ntBASIC19.4■□□□□ 0.7
Ccdc180J3QNE4 Gm2474-201ENSMUST00000195162 559 ntBASIC19.4■□□□□ 0.7
Ccdc180J3QNE4 3830406C13Rik-213ENSMUST00000225294 1191 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Ccdc180J3QNE4 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ccdc180J3QNE4 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
Ccdc180J3QNE4 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ccdc180J3QNE4 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc180J3QNE4 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc180J3QNE4 Spns3-201ENSMUST00000021154 1804 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc180J3QNE4 Olfr464-205ENSMUST00000217112 2232 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Ccdc180J3QNE4 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc180J3QNE4 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc180J3QNE4 Gm7781-201ENSMUST00000117258 788 ntBASIC19.39■□□□□ 0.69
Ccdc180J3QNE4 Snrnp27-201ENSMUST00000001186 885 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc180J3QNE4 Gm12946-201ENSMUST00000122969 519 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc180J3QNE4 Gm38004-201ENSMUST00000192972 357 ntBASIC19.39■□□□□ 0.69
Ccdc180J3QNE4 CAAA01125382.3-201ENSMUST00000215277 643 ntBASIC19.39■□□□□ 0.69
Ccdc180J3QNE4 Gm26440-201ENSMUST00000082591 129 ntBASIC19.39■□□□□ 0.69
Ccdc180J3QNE4 St6galnac2-206ENSMUST00000144398 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc180J3QNE4 Gm4880-201ENSMUST00000207645 1696 ntBASIC19.39■□□□□ 0.69
Ccdc180J3QNE4 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc180J3QNE4 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Ccdc180J3QNE4 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC19.39■□□□□ 0.69
Ccdc180J3QNE4 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ccdc180J3QNE4 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc180J3QNE4 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc180J3QNE4 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc180J3QNE4 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc180J3QNE4 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC19.38■□□□□ 0.69
Ccdc180J3QNE4 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC19.38■□□□□ 0.69
Ccdc180J3QNE4 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Ccdc180J3QNE4 Gm14341-201ENSMUST00000154616 667 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc180J3QNE4 Speer2-201ENSMUST00000076500 1118 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Ccdc180J3QNE4 Nsmce2-201ENSMUST00000079703 1054 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc180J3QNE4 Gm23458-201ENSMUST00000083257 169 ntBASIC19.38■□□□□ 0.69
Ccdc180J3QNE4 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc180J3QNE4 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ccdc180J3QNE4 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms