Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Otud1Q9CUB6 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Otud1Q9CUB6 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Otud1Q9CUB6 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Otud1Q9CUB6 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Otud1Q9CUB6 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Otud1Q9CUB6 Bcl2-202ENSMUST00000189999 2841 ntBASIC10.45□□□□□ -0.74
Otud1Q9CUB6 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Otud1Q9CUB6 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC10.45□□□□□ -0.74
Otud1Q9CUB6 Gm2128-201ENSMUST00000108009 2560 ntBASIC10.45□□□□□ -0.74
Otud1Q9CUB6 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Otud1Q9CUB6 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Otud1Q9CUB6 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Otud1Q9CUB6 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Otud1Q9CUB6 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Otud1Q9CUB6 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Otud1Q9CUB6 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Otud1Q9CUB6 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Otud1Q9CUB6 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Otud1Q9CUB6 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Otud1Q9CUB6 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC10.45□□□□□ -0.74
Otud1Q9CUB6 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Otud1Q9CUB6 Gm6560-201ENSMUST00000198588 1591 ntBASIC10.45□□□□□ -0.74
Otud1Q9CUB6 Gm44106-201ENSMUST00000203153 1599 ntBASIC10.45□□□□□ -0.74
Otud1Q9CUB6 Smok4a-201ENSMUST00000074512 1455 ntBASIC10.45□□□□□ -0.74
Otud1Q9CUB6 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Otud1Q9CUB6 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Otud1Q9CUB6 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Otud1Q9CUB6 Dcpp3-201ENSMUST00000115428 610 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
Otud1Q9CUB6 Gm13326-201ENSMUST00000118730 1011 ntBASIC10.45□□□□□ -0.74
Otud1Q9CUB6 Gm7113-201ENSMUST00000120477 958 ntBASIC10.45□□□□□ -0.74
Otud1Q9CUB6 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Otud1Q9CUB6 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Otud1Q9CUB6 Gm13147-202ENSMUST00000177526 1173 ntBASIC10.45□□□□□ -0.74
Otud1Q9CUB6 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC10.45□□□□□ -0.74
Otud1Q9CUB6 Gm3650-201ENSMUST00000180600 747 ntBASIC10.45□□□□□ -0.74
Otud1Q9CUB6 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Otud1Q9CUB6 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC10.45□□□□□ -0.74
Otud1Q9CUB6 Mir7035-201ENSMUST00000184713 82 ntBASIC10.45□□□□□ -0.74
Otud1Q9CUB6 Gm29516-201ENSMUST00000190402 468 ntBASIC10.45□□□□□ -0.74
Otud1Q9CUB6 4921513I08Rik-201ENSMUST00000206993 866 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Otud1Q9CUB6 AC133598.4-201ENSMUST00000224577 454 ntBASIC10.45□□□□□ -0.74
Otud1Q9CUB6 CT025618.1-203ENSMUST00000227008 589 ntBASIC10.45□□□□□ -0.74
Otud1Q9CUB6 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Otud1Q9CUB6 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Otud1Q9CUB6 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Otud1Q9CUB6 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Otud1Q9CUB6 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Otud1Q9CUB6 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Otud1Q9CUB6 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Otud1Q9CUB6 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Otud1Q9CUB6 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Otud1Q9CUB6 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Otud1Q9CUB6 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Otud1Q9CUB6 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Otud1Q9CUB6 Gm38273-201ENSMUST00000194987 2382 ntBASIC10.45□□□□□ -0.74
Otud1Q9CUB6 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Otud1Q9CUB6 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Otud1Q9CUB6 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Otud1Q9CUB6 Lin54-210ENSMUST00000154921 3734 ntTSL 5 BASIC10.45□□□□□ -0.74
Otud1Q9CUB6 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Otud1Q9CUB6 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Otud1Q9CUB6 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC10.45□□□□□ -0.74
Otud1Q9CUB6 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Otud1Q9CUB6 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC10.45□□□□□ -0.74
Otud1Q9CUB6 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC10.44□□□□□ -0.74
Otud1Q9CUB6 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Otud1Q9CUB6 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Otud1Q9CUB6 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Otud1Q9CUB6 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Otud1Q9CUB6 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Otud1Q9CUB6 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Otud1Q9CUB6 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Otud1Q9CUB6 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Otud1Q9CUB6 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Otud1Q9CUB6 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Otud1Q9CUB6 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC10.44□□□□□ -0.74
Otud1Q9CUB6 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC10.44□□□□□ -0.74
Otud1Q9CUB6 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Otud1Q9CUB6 Gm44746-201ENSMUST00000205565 1349 ntBASIC10.44□□□□□ -0.74
Otud1Q9CUB6 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Otud1Q9CUB6 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Otud1Q9CUB6 Gm25562-201ENSMUST00000104608 133 ntBASIC10.44□□□□□ -0.74
Otud1Q9CUB6 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
Otud1Q9CUB6 Ccl20-202ENSMUST00000113437 794 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Otud1Q9CUB6 Gm12389-201ENSMUST00000117696 418 ntBASIC10.44□□□□□ -0.74
Otud1Q9CUB6 Gm13351-201ENSMUST00000118087 414 ntBASIC10.44□□□□□ -0.74
Otud1Q9CUB6 Gm11952-201ENSMUST00000121172 821 ntBASIC10.44□□□□□ -0.74
Otud1Q9CUB6 Gm22985-201ENSMUST00000122754 116 ntBASIC10.44□□□□□ -0.74
Otud1Q9CUB6 Zfp968-203ENSMUST00000131676 1272 ntAPPRIS P1 TSL 2 BASIC10.44□□□□□ -0.74
Otud1Q9CUB6 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Otud1Q9CUB6 Gm12227-201ENSMUST00000147847 563 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Otud1Q9CUB6 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC10.44□□□□□ -0.74
Otud1Q9CUB6 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Otud1Q9CUB6 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Otud1Q9CUB6 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC10.44□□□□□ -0.74
Otud1Q9CUB6 Gm19927-201ENSMUST00000185792 781 ntBASIC10.44□□□□□ -0.74
Otud1Q9CUB6 Ccl20-203ENSMUST00000186832 772 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Otud1Q9CUB6 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Otud1Q9CUB6 Gm19587-201ENSMUST00000191395 545 ntBASIC10.44□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms