Protein–RNA interactions for Protein: Q8K2Q9

Shtn1, Shootin-1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1Q8K2Q9 Cpsf4l-201ENSMUST00000018871 1235 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Shtn1Q8K2Q9 Myo1h-207ENSMUST00000196676 1256 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Shtn1Q8K2Q9 Gm43117-201ENSMUST00000198531 379 ntBASIC12.81□□□□□ -0.36
Shtn1Q8K2Q9 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shtn1Q8K2Q9 Gm18256-201ENSMUST00000209087 907 ntBASIC12.81□□□□□ -0.36
Shtn1Q8K2Q9 AC118639.1-202ENSMUST00000226957 653 ntBASIC12.81□□□□□ -0.36
Shtn1Q8K2Q9 Stpg4-201ENSMUST00000040609 847 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shtn1Q8K2Q9 Olfr1417-201ENSMUST00000061235 948 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Shtn1Q8K2Q9 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shtn1Q8K2Q9 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shtn1Q8K2Q9 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Shtn1Q8K2Q9 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shtn1Q8K2Q9 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Shtn1Q8K2Q9 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shtn1Q8K2Q9 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Shtn1Q8K2Q9 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC12.81□□□□□ -0.36
Shtn1Q8K2Q9 Gm26818-201ENSMUST00000181367 1360 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Shtn1Q8K2Q9 AC154197.1-201ENSMUST00000225136 1382 ntBASIC12.81□□□□□ -0.36
Shtn1Q8K2Q9 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Shtn1Q8K2Q9 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC12.8□□□□□ -0.36
Shtn1Q8K2Q9 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shtn1Q8K2Q9 Gm43172-201ENSMUST00000202139 2137 ntBASIC12.8□□□□□ -0.36
Shtn1Q8K2Q9 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Shtn1Q8K2Q9 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC12.8□□□□□ -0.36
Shtn1Q8K2Q9 Eef1b2-204ENSMUST00000129339 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shtn1Q8K2Q9 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shtn1Q8K2Q9 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Shtn1Q8K2Q9 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Shtn1Q8K2Q9 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shtn1Q8K2Q9 Amd-ps3-201ENSMUST00000072796 1496 ntBASIC12.8□□□□□ -0.36
Shtn1Q8K2Q9 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shtn1Q8K2Q9 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Shtn1Q8K2Q9 Atp6v0e2-201ENSMUST00000040361 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shtn1Q8K2Q9 Cav2-203ENSMUST00000115462 694 ntTSL 5 BASIC12.8□□□□□ -0.36
Shtn1Q8K2Q9 Gm15626-201ENSMUST00000117478 868 ntBASIC12.8□□□□□ -0.36
Shtn1Q8K2Q9 Gm15015-201ENSMUST00000135491 636 ntTSL 3 BASIC12.8□□□□□ -0.36
Shtn1Q8K2Q9 Gm15020-201ENSMUST00000147142 636 ntTSL 3 BASIC12.8□□□□□ -0.36
Shtn1Q8K2Q9 Gm6677-201ENSMUST00000195100 441 ntBASIC12.8□□□□□ -0.36
Shtn1Q8K2Q9 Gm8828-201ENSMUST00000196786 1290 ntBASIC12.8□□□□□ -0.36
Shtn1Q8K2Q9 Gm9409-201ENSMUST00000197017 316 ntBASIC12.8□□□□□ -0.36
Shtn1Q8K2Q9 4930573C15Rik-201ENSMUST00000197707 777 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Shtn1Q8K2Q9 Gm43002-201ENSMUST00000200310 155 ntBASIC12.8□□□□□ -0.36
Shtn1Q8K2Q9 Gm44236-201ENSMUST00000204492 513 ntBASIC12.8□□□□□ -0.36
Shtn1Q8K2Q9 Fut1-202ENSMUST00000209379 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shtn1Q8K2Q9 Prrg2-211ENSMUST00000211337 676 ntTSL 3 BASIC12.8□□□□□ -0.36
Shtn1Q8K2Q9 E230034D01Rik-203ENSMUST00000217357 1159 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Shtn1Q8K2Q9 Abracl-203ENSMUST00000218994 425 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Shtn1Q8K2Q9 Gm10254-201ENSMUST00000052888 867 ntBASIC12.8□□□□□ -0.36
Shtn1Q8K2Q9 Ccdc136-201ENSMUST00000096084 3826 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Shtn1Q8K2Q9 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Shtn1Q8K2Q9 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shtn1Q8K2Q9 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Shtn1Q8K2Q9 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shtn1Q8K2Q9 Gm44663-201ENSMUST00000206898 3150 ntBASIC12.8□□□□□ -0.36
Shtn1Q8K2Q9 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shtn1Q8K2Q9 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC12.8□□□□□ -0.36
Shtn1Q8K2Q9 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Shtn1Q8K2Q9 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Shtn1Q8K2Q9 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shtn1Q8K2Q9 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shtn1Q8K2Q9 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shtn1Q8K2Q9 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shtn1Q8K2Q9 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Shtn1Q8K2Q9 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Shtn1Q8K2Q9 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shtn1Q8K2Q9 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Shtn1Q8K2Q9 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
Shtn1Q8K2Q9 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shtn1Q8K2Q9 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shtn1Q8K2Q9 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Shtn1Q8K2Q9 Stx17-203ENSMUST00000107721 1771 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Shtn1Q8K2Q9 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shtn1Q8K2Q9 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Shtn1Q8K2Q9 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shtn1Q8K2Q9 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shtn1Q8K2Q9 Gm44755-201ENSMUST00000207830 2102 ntBASIC12.79□□□□□ -0.36
Shtn1Q8K2Q9 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shtn1Q8K2Q9 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
Shtn1Q8K2Q9 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shtn1Q8K2Q9 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC12.79□□□□□ -0.36
Shtn1Q8K2Q9 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC12.79□□□□□ -0.36
Shtn1Q8K2Q9 Zfand1-202ENSMUST00000108377 936 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Shtn1Q8K2Q9 Pla2g1b-204ENSMUST00000145785 419 ntTSL 5 BASIC12.79□□□□□ -0.36
Shtn1Q8K2Q9 Gm4778-202ENSMUST00000159517 1241 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Shtn1Q8K2Q9 Gm16227-201ENSMUST00000160088 563 ntTSL 3 BASIC12.79□□□□□ -0.36
Shtn1Q8K2Q9 Gm44777-203ENSMUST00000206930 571 ntTSL 3 BASIC12.79□□□□□ -0.36
Shtn1Q8K2Q9 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Shtn1Q8K2Q9 AC134860.2-201ENSMUST00000225277 1036 ntBASIC12.79□□□□□ -0.36
Shtn1Q8K2Q9 Pgk1-rs7-201ENSMUST00000085735 1255 ntBASIC12.79□□□□□ -0.36
Shtn1Q8K2Q9 Gm6304-201ENSMUST00000096579 447 ntBASIC12.79□□□□□ -0.36
Shtn1Q8K2Q9 Gm4778-201ENSMUST00000098878 1098 ntBASIC12.79□□□□□ -0.36
Shtn1Q8K2Q9 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Shtn1Q8K2Q9 Exosc9-201ENSMUST00000029269 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shtn1Q8K2Q9 Hectd2os-203ENSMUST00000142067 2662 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Shtn1Q8K2Q9 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shtn1Q8K2Q9 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shtn1Q8K2Q9 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shtn1Q8K2Q9 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shtn1Q8K2Q9 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Shtn1Q8K2Q9 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms