Protein–RNA interactions for Protein: Q8CI71

Vps50, Syndetin, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps50Q8CI71 Slc6a5-203ENSMUST00000207753 6966 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Vps50Q8CI71 Fan1-201ENSMUST00000163289 3460 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Vps50Q8CI71 Olfr764-ps1-201ENSMUST00000204763 2854 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Vps50Q8CI71 Zfyve1-201ENSMUST00000048319 4036 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Vps50Q8CI71 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Vps50Q8CI71 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Vps50Q8CI71 Sorbs1-201ENSMUST00000099466 2223 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Vps50Q8CI71 Pex26-203ENSMUST00000120066 3861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Vps50Q8CI71 Gm42047-202ENSMUST00000212899 4988 ntTSL 2 BASIC10.69□□□□□ -0.7
Vps50Q8CI71 Mcm3ap-201ENSMUST00000170795 6427 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Vps50Q8CI71 Rapgef4os2-201ENSMUST00000128165 2116 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Vps50Q8CI71 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Vps50Q8CI71 Trak2-201ENSMUST00000027186 6189 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Vps50Q8CI71 Trem1-201ENSMUST00000048782 2993 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Vps50Q8CI71 Armc2-201ENSMUST00000095729 4855 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Vps50Q8CI71 Tcn2-206ENSMUST00000109992 1945 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Vps50Q8CI71 AA474408-201ENSMUST00000098110 3339 ntBASIC10.68□□□□□ -0.7
Vps50Q8CI71 Dqx1-201ENSMUST00000077502 3257 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Vps50Q8CI71 Dysf-211ENSMUST00000168387 6501 ntTSL 5 BASIC10.68□□□□□ -0.7
Vps50Q8CI71 Arhgap24-204ENSMUST00000112852 2783 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Vps50Q8CI71 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Vps50Q8CI71 Rrm2b-201ENSMUST00000022901 4561 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Vps50Q8CI71 Mkks-202ENSMUST00000110089 3178 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Vps50Q8CI71 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Vps50Q8CI71 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Vps50Q8CI71 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Vps50Q8CI71 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC10.68□□□□□ -0.7
Vps50Q8CI71 Platr4-203ENSMUST00000199155 2161 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Vps50Q8CI71 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Vps50Q8CI71 Gm25766-201ENSMUST00000104101 131 ntBASIC10.68□□□□□ -0.7
Vps50Q8CI71 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC10.68□□□□□ -0.7
Vps50Q8CI71 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Vps50Q8CI71 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC10.68□□□□□ -0.7
Vps50Q8CI71 Gm14892-201ENSMUST00000117636 267 ntBASIC10.68□□□□□ -0.7
Vps50Q8CI71 Mir1901-201ENSMUST00000122616 78 ntBASIC10.68□□□□□ -0.7
Vps50Q8CI71 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Vps50Q8CI71 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC10.68□□□□□ -0.7
Vps50Q8CI71 Gm26134-201ENSMUST00000178484 110 ntBASIC10.68□□□□□ -0.7
Vps50Q8CI71 Gm34023-201ENSMUST00000195539 217 ntBASIC10.68□□□□□ -0.7
Vps50Q8CI71 Gm5298-201ENSMUST00000201122 892 ntBASIC10.68□□□□□ -0.7
Vps50Q8CI71 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC10.68□□□□□ -0.7
Vps50Q8CI71 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC10.68□□□□□ -0.7
Vps50Q8CI71 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Vps50Q8CI71 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC10.68□□□□□ -0.7
Vps50Q8CI71 Gm5996-201ENSMUST00000211110 718 ntBASIC10.68□□□□□ -0.7
Vps50Q8CI71 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Vps50Q8CI71 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC10.68□□□□□ -0.7
Vps50Q8CI71 Ankrd11-201ENSMUST00000098333 7995 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Vps50Q8CI71 Mthfsd-201ENSMUST00000047282 8312 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Vps50Q8CI71 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Vps50Q8CI71 Hjurp-201ENSMUST00000054674 4878 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Vps50Q8CI71 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Vps50Q8CI71 Fgf1-202ENSMUST00000115582 2449 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Vps50Q8CI71 C1rb-201ENSMUST00000184647 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Vps50Q8CI71 A330033J07Rik-201ENSMUST00000180921 2816 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Vps50Q8CI71 Setbp1-201ENSMUST00000025430 9953 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Vps50Q8CI71 Rasgrp4-213ENSMUST00000204845 3182 ntTSL 5 BASIC10.68□□□□□ -0.7
Vps50Q8CI71 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Vps50Q8CI71 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Vps50Q8CI71 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Vps50Q8CI71 Prdm16-205ENSMUST00000105637 8595 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Vps50Q8CI71 Prdm16-201ENSMUST00000030902 8598 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Vps50Q8CI71 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Vps50Q8CI71 Avil-201ENSMUST00000026500 3033 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Vps50Q8CI71 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Vps50Q8CI71 1600014C10Rik-202ENSMUST00000165308 3335 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Vps50Q8CI71 1600014C10Rik-204ENSMUST00000178207 3341 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Vps50Q8CI71 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Vps50Q8CI71 Dopey2-201ENSMUST00000045004 7319 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Vps50Q8CI71 Nampt-201ENSMUST00000020886 4527 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Vps50Q8CI71 AC109214.1-201ENSMUST00000219520 1372 ntBASIC10.67□□□□□ -0.7
Vps50Q8CI71 Alas1-202ENSMUST00000112524 3089 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Vps50Q8CI71 Pax3-201ENSMUST00000004994 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Vps50Q8CI71 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Vps50Q8CI71 Rpgr-202ENSMUST00000072393 2380 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
Vps50Q8CI71 Gm43372-201ENSMUST00000202662 3016 ntBASIC10.67□□□□□ -0.7
Vps50Q8CI71 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Vps50Q8CI71 Gm6831-202ENSMUST00000213025 1673 ntBASIC10.67□□□□□ -0.7
Vps50Q8CI71 Agpat3-204ENSMUST00000105389 3678 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Vps50Q8CI71 Pde2a-202ENSMUST00000166652 3977 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Vps50Q8CI71 Rab27a-201ENSMUST00000034722 2979 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Vps50Q8CI71 Fam53c-202ENSMUST00000097622 4256 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Vps50Q8CI71 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Vps50Q8CI71 Pigo-202ENSMUST00000098109 4239 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Vps50Q8CI71 Plcxd2-201ENSMUST00000130481 7140 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Vps50Q8CI71 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Vps50Q8CI71 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Vps50Q8CI71 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Vps50Q8CI71 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Vps50Q8CI71 Gm12129-201ENSMUST00000120104 1147 ntBASIC10.67□□□□□ -0.7
Vps50Q8CI71 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC10.67□□□□□ -0.7
Vps50Q8CI71 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Vps50Q8CI71 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Vps50Q8CI71 Gm23153-201ENSMUST00000175323 313 ntBASIC10.67□□□□□ -0.7
Vps50Q8CI71 Gm18367-201ENSMUST00000176139 600 ntBASIC10.67□□□□□ -0.7
Vps50Q8CI71 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC10.67□□□□□ -0.7
Vps50Q8CI71 Gm43520-201ENSMUST00000197996 164 ntBASIC10.67□□□□□ -0.7
Vps50Q8CI71 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Vps50Q8CI71 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Vps50Q8CI71 Gm18539-201ENSMUST00000204745 1090 ntBASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 88.6 ms