Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Mir598-201ENSMUST00000102094 79 ntBASIC12.53□□□□□ -0.4
Nup98Q6PFD9 Gm10443-201ENSMUST00000119024 210 ntBASIC12.53□□□□□ -0.4
Nup98Q6PFD9 Gm16080-201ENSMUST00000152128 692 ntTSL 3 BASIC12.53□□□□□ -0.4
Nup98Q6PFD9 Gm17797-201ENSMUST00000182175 997 ntBASIC12.53□□□□□ -0.4
Nup98Q6PFD9 Gm6773-201ENSMUST00000182377 878 ntBASIC12.53□□□□□ -0.4
Nup98Q6PFD9 Gm42133-201ENSMUST00000196076 637 ntTSL 3 BASIC12.53□□□□□ -0.4
Nup98Q6PFD9 Gm20568-201ENSMUST00000197129 208 ntBASIC12.53□□□□□ -0.4
Nup98Q6PFD9 Gm43866-201ENSMUST00000203894 839 ntBASIC12.53□□□□□ -0.4
Nup98Q6PFD9 Gm45783-201ENSMUST00000210877 656 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
Nup98Q6PFD9 Tpd52l1-204ENSMUST00000214644 1103 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nup98Q6PFD9 AC159282.1-204ENSMUST00000219472 780 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nup98Q6PFD9 AC102327.1-201ENSMUST00000226389 742 ntBASIC12.53□□□□□ -0.4
Nup98Q6PFD9 AC123061.1-201ENSMUST00000228021 999 ntBASIC12.53□□□□□ -0.4
Nup98Q6PFD9 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nup98Q6PFD9 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Nup98Q6PFD9 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Nup98Q6PFD9 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nup98Q6PFD9 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nup98Q6PFD9 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
Nup98Q6PFD9 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nup98Q6PFD9 Gm16429-202ENSMUST00000201400 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nup98Q6PFD9 Cfap100-201ENSMUST00000062750 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nup98Q6PFD9 Gm7971-201ENSMUST00000086950 1848 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Nup98Q6PFD9 Il16-203ENSMUST00000145610 3183 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Nup98Q6PFD9 Plbd1-201ENSMUST00000032336 2010 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nup98Q6PFD9 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nup98Q6PFD9 AC130671.3-201ENSMUST00000227393 1897 ntBASIC12.52□□□□□ -0.4
Nup98Q6PFD9 Adgb-201ENSMUST00000045328 1893 ntTSL 2 BASIC12.52□□□□□ -0.4
Nup98Q6PFD9 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nup98Q6PFD9 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nup98Q6PFD9 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nup98Q6PFD9 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Nup98Q6PFD9 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nup98Q6PFD9 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nup98Q6PFD9 Pgbd5-206ENSMUST00000172566 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nup98Q6PFD9 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nup98Q6PFD9 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nup98Q6PFD9 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nup98Q6PFD9 Gm15746-201ENSMUST00000120684 1027 ntBASIC12.52□□□□□ -0.41
Nup98Q6PFD9 Gm12853-201ENSMUST00000134971 442 ntTSL 3 BASIC12.52□□□□□ -0.41
Nup98Q6PFD9 2410152P15Rik-201ENSMUST00000137405 871 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Nup98Q6PFD9 Gm7805-201ENSMUST00000154348 448 ntBASIC12.52□□□□□ -0.41
Nup98Q6PFD9 Osgep-207ENSMUST00000162177 1219 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Nup98Q6PFD9 Gm16228-201ENSMUST00000162286 809 ntBASIC12.52□□□□□ -0.41
Nup98Q6PFD9 Gm28499-201ENSMUST00000191576 666 ntTSL 2 BASIC12.52□□□□□ -0.41
Nup98Q6PFD9 Gm45310-201ENSMUST00000210436 275 ntBASIC12.52□□□□□ -0.41
Nup98Q6PFD9 Thy1-205ENSMUST00000215156 460 ntTSL 5 BASIC12.52□□□□□ -0.41
Nup98Q6PFD9 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Nup98Q6PFD9 AC125351.1-201ENSMUST00000221438 2223 ntBASIC12.52□□□□□ -0.41
Nup98Q6PFD9 Hdac9-208ENSMUST00000211107 1683 ntTSL 5 BASIC12.52□□□□□ -0.41
Nup98Q6PFD9 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nup98Q6PFD9 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nup98Q6PFD9 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nup98Q6PFD9 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC12.52□□□□□ -0.41
Nup98Q6PFD9 Palm2-201ENSMUST00000102904 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nup98Q6PFD9 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nup98Q6PFD9 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nup98Q6PFD9 Btc-201ENSMUST00000121044 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nup98Q6PFD9 4930578C19Rik-201ENSMUST00000044188 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nup98Q6PFD9 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Nup98Q6PFD9 Cfb-201ENSMUST00000025229 2737 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nup98Q6PFD9 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.51□□□□□ -0.41
Nup98Q6PFD9 Pax5-202ENSMUST00000102932 1460 ntTSL 5 BASIC12.51□□□□□ -0.41
Nup98Q6PFD9 Gm23132-201ENSMUST00000104254 132 ntBASIC12.51□□□□□ -0.41
Nup98Q6PFD9 Gm13777-201ENSMUST00000118208 345 ntBASIC12.51□□□□□ -0.41
Nup98Q6PFD9 Gm13505-201ENSMUST00000121666 817 ntBASIC12.51□□□□□ -0.41
Nup98Q6PFD9 Bola3-203ENSMUST00000122216 554 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Nup98Q6PFD9 Gm16193-201ENSMUST00000125903 778 ntTSL 3 BASIC12.51□□□□□ -0.41
Nup98Q6PFD9 Sectm1b-206ENSMUST00000168459 1075 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nup98Q6PFD9 Tnnc1-202ENSMUST00000169169 721 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nup98Q6PFD9 Gm29346-201ENSMUST00000188147 255 ntTSL 3 BASIC12.51□□□□□ -0.41
Nup98Q6PFD9 BB187690-201ENSMUST00000198619 1176 ntBASIC12.51□□□□□ -0.41
Nup98Q6PFD9 Gm42687-201ENSMUST00000199075 164 ntBASIC12.51□□□□□ -0.41
Nup98Q6PFD9 Gm7924-201ENSMUST00000203975 785 ntBASIC12.51□□□□□ -0.41
Nup98Q6PFD9 Arhgef33-207ENSMUST00000224966 490 ntBASIC12.51□□□□□ -0.41
Nup98Q6PFD9 Rpl37-201ENSMUST00000045356 835 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nup98Q6PFD9 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Nup98Q6PFD9 Gm7742-201ENSMUST00000167648 1527 ntBASIC12.51□□□□□ -0.41
Nup98Q6PFD9 Gm7732-201ENSMUST00000170486 1527 ntBASIC12.51□□□□□ -0.41
Nup98Q6PFD9 Gm7740-201ENSMUST00000186171 1527 ntBASIC12.51□□□□□ -0.41
Nup98Q6PFD9 Gm7736-201ENSMUST00000096981 1527 ntBASIC12.51□□□□□ -0.41
Nup98Q6PFD9 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nup98Q6PFD9 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nup98Q6PFD9 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Nup98Q6PFD9 Ifitm7-202ENSMUST00000178021 1823 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
Nup98Q6PFD9 Kyat1-203ENSMUST00000113660 1388 ntTSL 5 BASIC12.51□□□□□ -0.41
Nup98Q6PFD9 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Nup98Q6PFD9 AC125374.1-201ENSMUST00000213573 1400 ntBASIC12.51□□□□□ -0.41
Nup98Q6PFD9 Spert-201ENSMUST00000035243 1430 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nup98Q6PFD9 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Nup98Q6PFD9 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Nup98Q6PFD9 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nup98Q6PFD9 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Nup98Q6PFD9 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nup98Q6PFD9 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Nup98Q6PFD9 5930420M18Rik-201ENSMUST00000202893 2281 ntBASIC12.51□□□□□ -0.41
Nup98Q6PFD9 Srpx2-201ENSMUST00000033606 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nup98Q6PFD9 Gm13191-201ENSMUST00000136489 416 ntTSL 3 BASIC12.51□□□□□ -0.41
Nup98Q6PFD9 Gm13898-201ENSMUST00000141865 610 ntBASIC12.51□□□□□ -0.41
Nup98Q6PFD9 Gm26594-201ENSMUST00000180383 1094 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms