Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
Lmo4P61969 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Lmo4P61969 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
Lmo4P61969 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Lmo4P61969 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Lmo4P61969 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Lmo4P61969 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Lmo4P61969 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC8.72□□□□□ -1.01
Lmo4P61969 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Lmo4P61969 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC8.72□□□□□ -1.01
Lmo4P61969 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
Lmo4P61969 Trbv31-201ENSMUST00000103300 334 ntAPPRIS ALT2 BASIC8.72□□□□□ -1.01
Lmo4P61969 Gm5148-203ENSMUST00000108105 1282 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Lmo4P61969 Tprkb-204ENSMUST00000113752 749 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Lmo4P61969 3010001F23Rik-201ENSMUST00000130625 876 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Lmo4P61969 Platr12-201ENSMUST00000141027 462 ntTSL 3 BASIC8.72□□□□□ -1.01
Lmo4P61969 Mir1941-201ENSMUST00000157834 83 ntBASIC8.72□□□□□ -1.01
Lmo4P61969 Gm17231-201ENSMUST00000163186 645 ntTSL 3 BASIC8.72□□□□□ -1.01
Lmo4P61969 Tex33-202ENSMUST00000165170 1072 ntAPPRIS P4 TSL 1 (best) BASIC8.72□□□□□ -1.01
Lmo4P61969 Ly6i-202ENSMUST00000166694 620 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Lmo4P61969 Fbxo16-201ENSMUST00000169656 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Lmo4P61969 Gm7985-201ENSMUST00000183329 981 ntBASIC8.72□□□□□ -1.01
Lmo4P61969 Trav18-202ENSMUST00000186573 325 ntAPPRIS ALT2 BASIC8.72□□□□□ -1.01
Lmo4P61969 Gm37688-201ENSMUST00000195195 465 ntBASIC8.72□□□□□ -1.01
Lmo4P61969 Pcdh7-207ENSMUST00000199310 659 ntTSL 2 BASIC8.72□□□□□ -1.01
Lmo4P61969 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC8.72□□□□□ -1.01
Lmo4P61969 Ghrl-203ENSMUST00000203588 237 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Lmo4P61969 Gm9644-201ENSMUST00000212828 1183 ntBASIC8.72□□□□□ -1.01
Lmo4P61969 Gm9736-201ENSMUST00000219969 834 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
Lmo4P61969 AC154213.1-201ENSMUST00000228234 583 ntBASIC8.72□□□□□ -1.01
Lmo4P61969 Ggta1-201ENSMUST00000044255 1221 ntAPPRIS P3 TSL 5 BASIC8.72□□□□□ -1.01
Lmo4P61969 Ifne-201ENSMUST00000056014 664 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
Lmo4P61969 Haao-201ENSMUST00000000687 1222 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Lmo4P61969 Tex33-201ENSMUST00000074380 1147 ntAPPRIS P4 TSL 1 (best) BASIC8.72□□□□□ -1.01
Lmo4P61969 Gm9507-201ENSMUST00000095491 877 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
Lmo4P61969 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Lmo4P61969 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Lmo4P61969 Slfn3-201ENSMUST00000019130 1816 ntAPPRIS P2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Lmo4P61969 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Lmo4P61969 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Lmo4P61969 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Lmo4P61969 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Lmo4P61969 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC8.72□□□□□ -1.01
Lmo4P61969 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Lmo4P61969 Scnn1g-201ENSMUST00000000221 2991 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Lmo4P61969 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC8.72□□□□□ -1.01
Lmo4P61969 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Lmo4P61969 Prnd-201ENSMUST00000110169 1918 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Lmo4P61969 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Lmo4P61969 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Lmo4P61969 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Lmo4P61969 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Lmo4P61969 Gm8094-201ENSMUST00000165136 1408 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.01
Lmo4P61969 Gm42851-201ENSMUST00000201325 1411 ntBASIC8.71□□□□□ -1.01
Lmo4P61969 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC8.71□□□□□ -1.01
Lmo4P61969 Gm26586-201ENSMUST00000181918 1745 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
Lmo4P61969 Als2cr12-206ENSMUST00000191565 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.01
Lmo4P61969 Myc-204ENSMUST00000160009 1765 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
Lmo4P61969 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
Lmo4P61969 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Lmo4P61969 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Lmo4P61969 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.01
Lmo4P61969 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC8.71□□□□□ -1.01
Lmo4P61969 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.01
Lmo4P61969 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Lmo4P61969 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.01
Lmo4P61969 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Lmo4P61969 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Lmo4P61969 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Lmo4P61969 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Lmo4P61969 Gm23255-201ENSMUST00000102244 110 ntBASIC8.71□□□□□ -1.02
Lmo4P61969 Sfxn5-204ENSMUST00000113788 514 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Lmo4P61969 Msrb1-202ENSMUST00000115262 886 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Lmo4P61969 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Lmo4P61969 Olfr1372-ps1-201ENSMUST00000121007 934 ntBASIC8.71□□□□□ -1.02
Lmo4P61969 Gm14006-201ENSMUST00000122132 981 ntBASIC8.71□□□□□ -1.02
Lmo4P61969 Gm24140-201ENSMUST00000122773 326 ntBASIC8.71□□□□□ -1.02
Lmo4P61969 Gm14798-201ENSMUST00000139695 1189 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Lmo4P61969 Gm35584-201ENSMUST00000191767 641 ntTSL 5 BASIC8.71□□□□□ -1.02
Lmo4P61969 Gm8643-201ENSMUST00000195228 625 ntBASIC8.71□□□□□ -1.02
Lmo4P61969 Gm42859-201ENSMUST00000199572 193 ntBASIC8.71□□□□□ -1.02
Lmo4P61969 Ccdc114-205ENSMUST00000211367 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
Lmo4P61969 Gm8796-201ENSMUST00000219122 936 ntBASIC8.71□□□□□ -1.02
Lmo4P61969 AC133517.1-201ENSMUST00000225825 594 ntBASIC8.71□□□□□ -1.02
Lmo4P61969 4930546C10Rik-201ENSMUST00000025428 363 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
Lmo4P61969 Hcst-201ENSMUST00000075062 442 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Lmo4P61969 Krtap3-3-201ENSMUST00000092700 736 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
Lmo4P61969 Gemin8-203ENSMUST00000096252 1039 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
Lmo4P61969 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Lmo4P61969 Acsbg1-201ENSMUST00000034822 2880 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Lmo4P61969 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Lmo4P61969 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC8.71□□□□□ -1.02
Lmo4P61969 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Lmo4P61969 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC8.71□□□□□ -1.02
Lmo4P61969 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
Lmo4P61969 Hyal2-206ENSMUST00000195681 2968 ntBASIC8.71□□□□□ -1.02
Lmo4P61969 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Lmo4P61969 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Lmo4P61969 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Lmo4P61969 Atxn7l1-203ENSMUST00000110824 1675 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms