Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nup43P59235 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nup43P59235 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nup43P59235 Gm37058-201ENSMUST00000193393 1644 ntBASIC10.23□□□□□ -0.77
Nup43P59235 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC10.23□□□□□ -0.77
Nup43P59235 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nup43P59235 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nup43P59235 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Nup43P59235 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Nup43P59235 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
Nup43P59235 Bglap3-203ENSMUST00000107543 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nup43P59235 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Nup43P59235 Gm11077-201ENSMUST00000111844 84 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Nup43P59235 Gm14126-201ENSMUST00000122345 395 ntBASIC10.23□□□□□ -0.77
Nup43P59235 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nup43P59235 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC10.23□□□□□ -0.77
Nup43P59235 Gm17221-201ENSMUST00000163909 481 ntBASIC10.23□□□□□ -0.77
Nup43P59235 Gm5244-201ENSMUST00000164001 339 ntBASIC10.23□□□□□ -0.77
Nup43P59235 Gm17073-201ENSMUST00000168069 556 ntBASIC10.23□□□□□ -0.77
Nup43P59235 Gm17192-201ENSMUST00000169031 511 ntBASIC10.23□□□□□ -0.77
Nup43P59235 Olfr1432-201ENSMUST00000180978 930 ntAPPRIS ALT2 BASIC10.23□□□□□ -0.77
Nup43P59235 Gm26982-201ENSMUST00000182250 1151 ntBASIC10.23□□□□□ -0.77
Nup43P59235 Mir7032-201ENSMUST00000185154 79 ntBASIC10.23□□□□□ -0.77
Nup43P59235 Gm37365-201ENSMUST00000193109 409 ntBASIC10.23□□□□□ -0.77
Nup43P59235 Gm3289-201ENSMUST00000200819 756 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Nup43P59235 Gm44216-201ENSMUST00000203942 157 ntBASIC10.23□□□□□ -0.77
Nup43P59235 Gm3793-201ENSMUST00000204973 672 ntBASIC10.23□□□□□ -0.77
Nup43P59235 Rpl15-ps5-201ENSMUST00000205636 605 ntBASIC10.23□□□□□ -0.77
Nup43P59235 Gm45696-201ENSMUST00000212088 985 ntBASIC10.23□□□□□ -0.77
Nup43P59235 Gm8162-201ENSMUST00000213951 665 ntBASIC10.23□□□□□ -0.77
Nup43P59235 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC10.23□□□□□ -0.77
Nup43P59235 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC10.23□□□□□ -0.77
Nup43P59235 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC10.23□□□□□ -0.77
Nup43P59235 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Nup43P59235 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nup43P59235 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nup43P59235 Gmps-201ENSMUST00000029405 8105 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nup43P59235 Myh4-201ENSMUST00000018632 6016 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Nup43P59235 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nup43P59235 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nup43P59235 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Nup43P59235 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Nup43P59235 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nup43P59235 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nup43P59235 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Nup43P59235 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Nup43P59235 BC043934-202ENSMUST00000185694 2356 ntBASIC10.23□□□□□ -0.77
Nup43P59235 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC10.23□□□□□ -0.77
Nup43P59235 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nup43P59235 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Nup43P59235 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nup43P59235 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nup43P59235 Stard4-201ENSMUST00000025236 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nup43P59235 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC10.22□□□□□ -0.77
Nup43P59235 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nup43P59235 Fam184b-201ENSMUST00000016023 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nup43P59235 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nup43P59235 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nup43P59235 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nup43P59235 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Nup43P59235 Gm13615-201ENSMUST00000120242 1612 ntBASIC10.22□□□□□ -0.77
Nup43P59235 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Nup43P59235 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Nup43P59235 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Nup43P59235 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC10.22□□□□□ -0.77
Nup43P59235 Slc4a9-201ENSMUST00000074298 2714 ntAPPRIS P3 TSL 5 BASIC10.22□□□□□ -0.77
Nup43P59235 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Nup43P59235 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nup43P59235 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Nup43P59235 4930402K13Rik-201ENSMUST00000059967 1781 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Nup43P59235 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Nup43P59235 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC10.22□□□□□ -0.77
Nup43P59235 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nup43P59235 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nup43P59235 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Nup43P59235 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC10.22□□□□□ -0.77
Nup43P59235 Mical2-202ENSMUST00000050149 6669 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nup43P59235 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nup43P59235 Arfgef3-201ENSMUST00000019999 5606 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nup43P59235 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nup43P59235 Gm6158-201ENSMUST00000109467 904 ntBASIC10.22□□□□□ -0.77
Nup43P59235 Gm12795-201ENSMUST00000117594 539 ntBASIC10.22□□□□□ -0.77
Nup43P59235 Gm14201-201ENSMUST00000117627 289 ntBASIC10.22□□□□□ -0.77
Nup43P59235 Gm14165-201ENSMUST00000121456 952 ntBASIC10.22□□□□□ -0.77
Nup43P59235 Gm13445-201ENSMUST00000121664 307 ntBASIC10.22□□□□□ -0.77
Nup43P59235 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC10.22□□□□□ -0.77
Nup43P59235 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Nup43P59235 Platr17-201ENSMUST00000172817 807 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nup43P59235 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Nup43P59235 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC10.22□□□□□ -0.77
Nup43P59235 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Nup43P59235 Gm32591-203ENSMUST00000204725 696 ntTSL 3 BASIC10.22□□□□□ -0.77
Nup43P59235 Gm9873-201ENSMUST00000063891 1097 ntBASIC10.22□□□□□ -0.77
Nup43P59235 Hcst-201ENSMUST00000075062 442 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nup43P59235 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Nup43P59235 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Nup43P59235 Nphs1-203ENSMUST00000126297 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nup43P59235 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Nup43P59235 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Nup43P59235 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms