Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pdx1P52946 Gtf2ird1-206ENSMUST00000111244 3461 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pdx1P52946 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pdx1P52946 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Pdx1P52946 Gm12829-201ENSMUST00000146346 2434 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Pdx1P52946 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC10.67□□□□□ -0.7
Pdx1P52946 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pdx1P52946 Sdk1-201ENSMUST00000074546 7063 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Pdx1P52946 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pdx1P52946 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Pdx1P52946 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pdx1P52946 Ern2-201ENSMUST00000033153 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pdx1P52946 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pdx1P52946 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pdx1P52946 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pdx1P52946 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Pdx1P52946 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Pdx1P52946 Lypla1-202ENSMUST00000115529 930 ntTSL 2 BASIC10.67□□□□□ -0.7
Pdx1P52946 Gm12990-201ENSMUST00000120372 468 ntBASIC10.67□□□□□ -0.7
Pdx1P52946 Gm14165-201ENSMUST00000121456 952 ntBASIC10.67□□□□□ -0.7
Pdx1P52946 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC10.67□□□□□ -0.7
Pdx1P52946 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC10.67□□□□□ -0.7
Pdx1P52946 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Pdx1P52946 Platr17-201ENSMUST00000172817 807 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pdx1P52946 Olfr1432-201ENSMUST00000180978 930 ntAPPRIS ALT2 BASIC10.67□□□□□ -0.7
Pdx1P52946 Gm18014-201ENSMUST00000183369 817 ntBASIC10.67□□□□□ -0.7
Pdx1P52946 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
Pdx1P52946 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC10.67□□□□□ -0.7
Pdx1P52946 Gm9116-201ENSMUST00000192400 1018 ntBASIC10.67□□□□□ -0.7
Pdx1P52946 Gm20781-201ENSMUST00000193154 693 ntBASIC10.67□□□□□ -0.7
Pdx1P52946 Gm21736-201ENSMUST00000195399 693 ntBASIC10.67□□□□□ -0.7
Pdx1P52946 Gm42859-201ENSMUST00000199572 193 ntBASIC10.67□□□□□ -0.7
Pdx1P52946 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Pdx1P52946 CT030653.1-201ENSMUST00000224382 1279 ntBASIC10.67□□□□□ -0.7
Pdx1P52946 Olfr700-201ENSMUST00000079936 951 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Pdx1P52946 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pdx1P52946 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pdx1P52946 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Pdx1P52946 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pdx1P52946 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC10.67□□□□□ -0.7
Pdx1P52946 Slc17a8-202ENSMUST00000105295 1863 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Pdx1P52946 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pdx1P52946 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pdx1P52946 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pdx1P52946 Gm7642-201ENSMUST00000216345 1809 ntBASIC10.67□□□□□ -0.7
Pdx1P52946 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pdx1P52946 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
Pdx1P52946 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pdx1P52946 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pdx1P52946 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pdx1P52946 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Pdx1P52946 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pdx1P52946 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC10.67□□□□□ -0.7
Pdx1P52946 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Pdx1P52946 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Pdx1P52946 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC10.67□□□□□ -0.7
Pdx1P52946 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Pdx1P52946 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pdx1P52946 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Pdx1P52946 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Pdx1P52946 Gemin8-202ENSMUST00000087169 1928 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pdx1P52946 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pdx1P52946 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Pdx1P52946 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Pdx1P52946 Gm42833-201ENSMUST00000196019 2124 ntBASIC10.66□□□□□ -0.7
Pdx1P52946 Olfr434-203ENSMUST00000216562 1318 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Pdx1P52946 4931423N10Rik-201ENSMUST00000028113 1842 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pdx1P52946 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pdx1P52946 Pex26-203ENSMUST00000120066 3861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pdx1P52946 A930007I19Rik-201ENSMUST00000180737 2319 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Pdx1P52946 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Pdx1P52946 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC10.66□□□□□ -0.7
Pdx1P52946 4930412O13Rik-202ENSMUST00000114919 558 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
Pdx1P52946 Gm16518-201ENSMUST00000117960 508 ntBASIC10.66□□□□□ -0.7
Pdx1P52946 Gm13445-201ENSMUST00000121664 307 ntBASIC10.66□□□□□ -0.7
Pdx1P52946 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Pdx1P52946 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Pdx1P52946 Aamdc-209ENSMUST00000144858 380 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Pdx1P52946 Slc25a12-206ENSMUST00000151937 6351 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pdx1P52946 Gm25830-201ENSMUST00000158923 132 ntBASIC10.66□□□□□ -0.7
Pdx1P52946 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC10.66□□□□□ -0.7
Pdx1P52946 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC10.66□□□□□ -0.7
Pdx1P52946 Gm26982-201ENSMUST00000182250 1151 ntBASIC10.66□□□□□ -0.7
Pdx1P52946 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Pdx1P52946 Gm3793-201ENSMUST00000204973 672 ntBASIC10.66□□□□□ -0.7
Pdx1P52946 Btg4-203ENSMUST00000213680 1282 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pdx1P52946 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC10.66□□□□□ -0.7
Pdx1P52946 Gm9487-201ENSMUST00000216600 472 ntBASIC10.66□□□□□ -0.7
Pdx1P52946 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC10.66□□□□□ -0.7
Pdx1P52946 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC10.66□□□□□ -0.7
Pdx1P52946 AC124581.2-201ENSMUST00000225459 282 ntBASIC10.66□□□□□ -0.7
Pdx1P52946 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Pdx1P52946 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Pdx1P52946 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pdx1P52946 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pdx1P52946 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Pdx1P52946 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pdx1P52946 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Pdx1P52946 Gm45053-201ENSMUST00000206112 2499 ntBASIC10.66□□□□□ -0.7
Pdx1P52946 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms