Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 Tial1-202ENSMUST00000106226 4451 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cd28P31041 Tcn2-205ENSMUST00000109991 1943 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Cd28P31041 Adamts13-202ENSMUST00000102891 4506 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cd28P31041 Gm15482-201ENSMUST00000152691 4529 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Cd28P31041 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cd28P31041 Aebp2-201ENSMUST00000032359 5932 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cd28P31041 Slc16a5-202ENSMUST00000106532 2062 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cd28P31041 Celf2-224ENSMUST00000182879 2223 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Cd28P31041 Cxcr2-201ENSMUST00000027372 2220 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Cd28P31041 Gm45867-201ENSMUST00000208201 2317 ntBASIC9.44□□□□□ -0.9
Cd28P31041 AC117648.1-201ENSMUST00000219777 2510 ntBASIC9.44□□□□□ -0.9
Cd28P31041 Zfp324-201ENSMUST00000038701 4315 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cd28P31041 Slc35a4-206ENSMUST00000186538 2842 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cd28P31041 Zfp512-201ENSMUST00000076264 3299 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cd28P31041 Sgk3-204ENSMUST00000171265 3680 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cd28P31041 Wdr78-201ENSMUST00000036451 3671 ntTSL 5 BASIC9.44□□□□□ -0.9
Cd28P31041 Gm14398-201ENSMUST00000117287 1073 ntBASIC9.44□□□□□ -0.9
Cd28P31041 Gm12337-201ENSMUST00000119634 400 ntBASIC9.44□□□□□ -0.9
Cd28P31041 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Cd28P31041 Gm17376-201ENSMUST00000166016 84 ntBASIC9.44□□□□□ -0.9
Cd28P31041 Gm4812-201ENSMUST00000182847 993 ntBASIC9.44□□□□□ -0.9
Cd28P31041 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cd28P31041 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC9.44□□□□□ -0.9
Cd28P31041 Gm43186-201ENSMUST00000198130 824 ntBASIC9.44□□□□□ -0.9
Cd28P31041 Gm5869-201ENSMUST00000200248 1257 ntBASIC9.44□□□□□ -0.9
Cd28P31041 Gm3961-201ENSMUST00000204425 994 ntBASIC9.44□□□□□ -0.9
Cd28P31041 AC107638.1-201ENSMUST00000213690 1061 ntBASIC9.44□□□□□ -0.9
Cd28P31041 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Cd28P31041 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC9.44□□□□□ -0.9
Cd28P31041 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cd28P31041 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cd28P31041 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cd28P31041 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cd28P31041 Gm8385-201ENSMUST00000058999 643 ntBASIC9.44□□□□□ -0.9
Cd28P31041 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cd28P31041 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Cd28P31041 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cd28P31041 Gm42853-201ENSMUST00000201273 1387 ntBASIC9.44□□□□□ -0.9
Cd28P31041 Gm42815-201ENSMUST00000198787 1470 ntBASIC9.44□□□□□ -0.9
Cd28P31041 Gm5739-201ENSMUST00000208601 1703 ntBASIC9.44□□□□□ -0.9
Cd28P31041 Heatr6-201ENSMUST00000001002 5614 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cd28P31041 Adgrl3-204ENSMUST00000117407 5705 ntTSL 5 BASIC9.44□□□□□ -0.9
Cd28P31041 Cped1-201ENSMUST00000115382 2002 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Cd28P31041 Ctsl-205ENSMUST00000222517 6168 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Cd28P31041 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cd28P31041 Setd1b-201ENSMUST00000056053 7362 ntAPPRIS P2 TSL 5 BASIC9.44□□□□□ -0.9
Cd28P31041 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cd28P31041 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC9.44□□□□□ -0.9
Cd28P31041 4932442E05Rik-201ENSMUST00000191892 2717 ntBASIC9.44□□□□□ -0.9
Cd28P31041 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cd28P31041 Lep-201ENSMUST00000069789 3259 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cd28P31041 Robo4-203ENSMUST00000115048 3392 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Cd28P31041 Scnn1a-201ENSMUST00000081440 3499 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cd28P31041 D030028A08Rik-202ENSMUST00000131501 3542 ntTSL 2 BASIC9.44□□□□□ -0.9
Cd28P31041 Slc1a4-202ENSMUST00000109594 3926 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cd28P31041 Nbr1-203ENSMUST00000103099 4789 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Cd28P31041 Tmc3-201ENSMUST00000039317 6221 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cd28P31041 Zfp956-201ENSMUST00000101445 2761 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cd28P31041 Ncf2-201ENSMUST00000027754 2596 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cd28P31041 Ahrr-202ENSMUST00000109640 2419 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Cd28P31041 Gm4900-201ENSMUST00000222046 1628 ntBASIC9.43□□□□□ -0.9
Cd28P31041 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cd28P31041 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Cd28P31041 Fam83c-201ENSMUST00000029143 3972 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cd28P31041 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC9.43□□□□□ -0.9
Cd28P31041 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC9.43□□□□□ -0.9
Cd28P31041 Gm8302-201ENSMUST00000119217 852 ntBASIC9.43□□□□□ -0.9
Cd28P31041 Gm15595-201ENSMUST00000120840 961 ntBASIC9.43□□□□□ -0.9
Cd28P31041 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC9.43□□□□□ -0.9
Cd28P31041 Gm25492-201ENSMUST00000157383 129 ntBASIC9.43□□□□□ -0.9
Cd28P31041 4930471C04Rik-201ENSMUST00000166038 865 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Cd28P31041 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC9.43□□□□□ -0.9
Cd28P31041 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Cd28P31041 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Cd28P31041 Platr10-202ENSMUST00000191479 818 ntBASIC9.43□□□□□ -0.9
Cd28P31041 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC9.43□□□□□ -0.9
Cd28P31041 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC9.43□□□□□ -0.9
Cd28P31041 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC9.43□□□□□ -0.9
Cd28P31041 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cd28P31041 Ntng1-201ENSMUST00000051253 327 ntBASIC9.43□□□□□ -0.9
Cd28P31041 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cd28P31041 Anks1b-203ENSMUST00000099368 2799 ntTSL 5 BASIC9.43□□□□□ -0.9
Cd28P31041 Erich3-202ENSMUST00000098496 8280 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Cd28P31041 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Cd28P31041 Itgal-203ENSMUST00000118405 3909 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Cd28P31041 Cyp7b1-201ENSMUST00000035625 2166 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cd28P31041 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Cd28P31041 Cx3cl1-201ENSMUST00000034230 3315 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cd28P31041 Cdkn1b-202ENSMUST00000067327 4552 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cd28P31041 Gripap1-201ENSMUST00000065932 3156 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cd28P31041 Tns3-201ENSMUST00000020695 7483 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Cd28P31041 Epb41l4a-201ENSMUST00000025234 3853 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cd28P31041 Tubb5-201ENSMUST00000001566 2649 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cd28P31041 Ctsa-202ENSMUST00000103092 3646 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Cd28P31041 Gm15651-201ENSMUST00000159953 2507 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Cd28P31041 Phka2-204ENSMUST00000112380 4341 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cd28P31041 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC9.42□□□□□ -0.9
Cd28P31041 Glyctk-201ENSMUST00000036382 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cd28P31041 Kif3a-202ENSMUST00000118353 2178 ntTSL 5 BASIC9.42□□□□□ -0.9
Cd28P31041 Gm4917-201ENSMUST00000121452 650 ntBASIC9.42□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms