Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nfkb1P25799 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Nfkb1P25799 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Nfkb1P25799 Enpp7-201ENSMUST00000092373 1370 ntAPPRIS P2 TSL 2 BASIC11.16□□□□□ -0.62
Nfkb1P25799 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nfkb1P25799 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Nfkb1P25799 Mtch2-202ENSMUST00000111467 2281 ntTSL 5 BASIC11.16□□□□□ -0.62
Nfkb1P25799 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Nfkb1P25799 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC11.16□□□□□ -0.62
Nfkb1P25799 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Nfkb1P25799 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Nfkb1P25799 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nfkb1P25799 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nfkb1P25799 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nfkb1P25799 Gfra2-203ENSMUST00000227697 1323 ntBASIC11.16□□□□□ -0.62
Nfkb1P25799 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nfkb1P25799 Nek3-204ENSMUST00000178324 1989 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nfkb1P25799 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Nfkb1P25799 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nfkb1P25799 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nfkb1P25799 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nfkb1P25799 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Nfkb1P25799 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC11.16□□□□□ -0.62
Nfkb1P25799 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nfkb1P25799 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC11.16□□□□□ -0.62
Nfkb1P25799 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nfkb1P25799 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Nfkb1P25799 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nfkb1P25799 Gm13817-201ENSMUST00000142249 604 ntTSL 3 BASIC11.16□□□□□ -0.62
Nfkb1P25799 Gm25569-201ENSMUST00000157175 131 ntBASIC11.16□□□□□ -0.62
Nfkb1P25799 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC11.16□□□□□ -0.62
Nfkb1P25799 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC11.16□□□□□ -0.62
Nfkb1P25799 Mipep-ps-201ENSMUST00000177439 291 ntBASIC11.16□□□□□ -0.62
Nfkb1P25799 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC11.16□□□□□ -0.62
Nfkb1P25799 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC11.16□□□□□ -0.62
Nfkb1P25799 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC11.16□□□□□ -0.62
Nfkb1P25799 Gm44552-201ENSMUST00000205458 1247 ntBASIC11.16□□□□□ -0.62
Nfkb1P25799 Gm6855-201ENSMUST00000206307 790 ntBASIC11.16□□□□□ -0.62
Nfkb1P25799 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Nfkb1P25799 Gm45085-201ENSMUST00000209100 441 ntBASIC11.16□□□□□ -0.62
Nfkb1P25799 AC137871.1-201ENSMUST00000228278 475 ntBASIC11.16□□□□□ -0.62
Nfkb1P25799 Crygf-201ENSMUST00000027082 627 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nfkb1P25799 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nfkb1P25799 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nfkb1P25799 Gm6478-201ENSMUST00000099450 742 ntBASIC11.16□□□□□ -0.62
Nfkb1P25799 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC11.16□□□□□ -0.62
Nfkb1P25799 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nfkb1P25799 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nfkb1P25799 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nfkb1P25799 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nfkb1P25799 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Nfkb1P25799 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nfkb1P25799 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Nfkb1P25799 Arrb2-201ENSMUST00000079056 1443 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Nfkb1P25799 Tex45-201ENSMUST00000047265 1613 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Nfkb1P25799 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nfkb1P25799 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Nfkb1P25799 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Nfkb1P25799 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC11.16□□□□□ -0.62
Nfkb1P25799 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Nfkb1P25799 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Nfkb1P25799 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC11.15□□□□□ -0.62
Nfkb1P25799 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nfkb1P25799 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nfkb1P25799 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nfkb1P25799 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nfkb1P25799 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC11.15□□□□□ -0.62
Nfkb1P25799 C130083M11Rik-201ENSMUST00000197171 2072 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Nfkb1P25799 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC11.15□□□□□ -0.62
Nfkb1P25799 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nfkb1P25799 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nfkb1P25799 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nfkb1P25799 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nfkb1P25799 Eef1akmt4-202ENSMUST00000119224 1464 ntTSL 2 BASIC11.15□□□□□ -0.62
Nfkb1P25799 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nfkb1P25799 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nfkb1P25799 Olfr29-ps1-201ENSMUST00000117959 963 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Nfkb1P25799 Gm12943-201ENSMUST00000119616 210 ntBASIC11.15□□□□□ -0.62
Nfkb1P25799 Fthl17-ps2-201ENSMUST00000122268 528 ntBASIC11.15□□□□□ -0.62
Nfkb1P25799 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Nfkb1P25799 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC11.15□□□□□ -0.62
Nfkb1P25799 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC11.15□□□□□ -0.62
Nfkb1P25799 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC11.15□□□□□ -0.62
Nfkb1P25799 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC11.15□□□□□ -0.62
Nfkb1P25799 Gm9507-202ENSMUST00000180157 654 ntBASIC11.15□□□□□ -0.62
Nfkb1P25799 Ighv5-8-202ENSMUST00000191967 337 ntBASIC11.15□□□□□ -0.62
Nfkb1P25799 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Nfkb1P25799 Gm5302-201ENSMUST00000202130 796 ntBASIC11.15□□□□□ -0.62
Nfkb1P25799 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Nfkb1P25799 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nfkb1P25799 Gm19324-201ENSMUST00000213229 1169 ntBASIC11.15□□□□□ -0.62
Nfkb1P25799 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Nfkb1P25799 AC153962.2-201ENSMUST00000219417 550 ntBASIC11.15□□□□□ -0.62
Nfkb1P25799 Gm5449-201ENSMUST00000081132 357 ntBASIC11.15□□□□□ -0.62
Nfkb1P25799 Gm43167-201ENSMUST00000202001 1606 ntBASIC11.15□□□□□ -0.62
Nfkb1P25799 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Nfkb1P25799 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Nfkb1P25799 Gm42427-201ENSMUST00000200473 5292 ntBASIC11.15□□□□□ -0.62
Nfkb1P25799 Cxcl11-201ENSMUST00000077820 1581 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Nfkb1P25799 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC11.15□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms