Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm3329-201ENSMUST00000159873 556 ntBASIC8.79□□□□□ -1
Hoxd3P09027 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Hoxd3P09027 Clec4a2-204ENSMUST00000161365 918 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
Hoxd3P09027 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Hoxd3P09027 Rd3l-201ENSMUST00000170525 984 ntAPPRIS P1 TSL 2 BASIC8.79□□□□□ -1
Hoxd3P09027 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC8.79□□□□□ -1
Hoxd3P09027 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC8.79□□□□□ -1
Hoxd3P09027 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC8.79□□□□□ -1
Hoxd3P09027 Mir7051-201ENSMUST00000184167 73 ntBASIC8.79□□□□□ -1
Hoxd3P09027 Gm28388-201ENSMUST00000186262 437 ntBASIC8.79□□□□□ -1
Hoxd3P09027 6030442E23Rik-201ENSMUST00000186618 642 ntTSL 1 (best) BASIC8.79□□□□□ -1
Hoxd3P09027 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC8.79□□□□□ -1
Hoxd3P09027 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Hoxd3P09027 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC8.79□□□□□ -1
Hoxd3P09027 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Hoxd3P09027 1700042D02Rik-201ENSMUST00000198232 389 ntTSL 1 (best) BASIC8.79□□□□□ -1
Hoxd3P09027 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC8.79□□□□□ -1
Hoxd3P09027 Gm44412-201ENSMUST00000203018 294 ntBASIC8.79□□□□□ -1
Hoxd3P09027 Gm43966-201ENSMUST00000203301 612 ntBASIC8.79□□□□□ -1
Hoxd3P09027 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC8.79□□□□□ -1
Hoxd3P09027 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC8.79□□□□□ -1
Hoxd3P09027 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC8.79□□□□□ -1
Hoxd3P09027 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC8.79□□□□□ -1
Hoxd3P09027 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC8.79□□□□□ -1
Hoxd3P09027 Gm18255-201ENSMUST00000211316 765 ntBASIC8.79□□□□□ -1
Hoxd3P09027 AC153516.1-201ENSMUST00000217955 779 ntBASIC8.79□□□□□ -1
Hoxd3P09027 AC154219.1-201ENSMUST00000220764 1262 ntBASIC8.79□□□□□ -1
Hoxd3P09027 Gm5655-201ENSMUST00000221078 901 ntBASIC8.79□□□□□ -1
Hoxd3P09027 Platr25-206ENSMUST00000222303 1171 ntTSL 5 BASIC8.79□□□□□ -1
Hoxd3P09027 CT009536.2-201ENSMUST00000225370 665 ntBASIC8.79□□□□□ -1
Hoxd3P09027 AC136376.2-201ENSMUST00000228819 490 ntBASIC8.79□□□□□ -1
Hoxd3P09027 Olfr844-201ENSMUST00000054106 930 ntBASIC8.79□□□□□ -1
Hoxd3P09027 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC8.79□□□□□ -1
Hoxd3P09027 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC8.79□□□□□ -1
Hoxd3P09027 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
Hoxd3P09027 Olfr810-201ENSMUST00000091986 1006 ntAPPRIS P1 BASIC8.79□□□□□ -1
Hoxd3P09027 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC8.79□□□□□ -1
Hoxd3P09027 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC8.79□□□□□ -1
Hoxd3P09027 Mak16-201ENSMUST00000033983 1902 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Hoxd3P09027 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC8.79□□□□□ -1
Hoxd3P09027 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Hoxd3P09027 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
Hoxd3P09027 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Hoxd3P09027 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC8.79□□□□□ -1
Hoxd3P09027 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
Hoxd3P09027 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC8.79□□□□□ -1
Hoxd3P09027 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC8.79□□□□□ -1
Hoxd3P09027 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC8.79□□□□□ -1
Hoxd3P09027 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Hoxd3P09027 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC8.79□□□□□ -1
Hoxd3P09027 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Hoxd3P09027 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Hoxd3P09027 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC8.79□□□□□ -1
Hoxd3P09027 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC8.79□□□□□ -1
Hoxd3P09027 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Hoxd3P09027 Gm9415-201ENSMUST00000200462 1321 ntBASIC8.79□□□□□ -1
Hoxd3P09027 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Hoxd3P09027 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Hoxd3P09027 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
Hoxd3P09027 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
Hoxd3P09027 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Hoxd3P09027 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC8.78□□□□□ -1
Hoxd3P09027 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Hoxd3P09027 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Hoxd3P09027 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Hoxd3P09027 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC8.78□□□□□ -1
Hoxd3P09027 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Hoxd3P09027 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
Hoxd3P09027 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Hoxd3P09027 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Hoxd3P09027 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Hoxd3P09027 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Hoxd3P09027 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Hoxd3P09027 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Hoxd3P09027 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Hoxd3P09027 Slc45a4-207ENSMUST00000151288 7509 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
Hoxd3P09027 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC8.78□□□□□ -1
Hoxd3P09027 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC8.78□□□□□ -1
Hoxd3P09027 Gm12584-201ENSMUST00000117109 1105 ntBASIC8.78□□□□□ -1
Hoxd3P09027 Gm8111-201ENSMUST00000117659 987 ntBASIC8.78□□□□□ -1
Hoxd3P09027 Gm14083-201ENSMUST00000117873 620 ntBASIC8.78□□□□□ -1
Hoxd3P09027 Gm14943-201ENSMUST00000118056 546 ntBASIC8.78□□□□□ -1
Hoxd3P09027 Gm14388-201ENSMUST00000118119 477 ntBASIC8.78□□□□□ -1
Hoxd3P09027 Gm12664-201ENSMUST00000118306 913 ntBASIC8.78□□□□□ -1
Hoxd3P09027 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC8.78□□□□□ -1
Hoxd3P09027 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC8.78□□□□□ -1
Hoxd3P09027 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC8.78□□□□□ -1
Hoxd3P09027 1700003G18Rik-202ENSMUST00000150518 312 ntTSL 3 BASIC8.78□□□□□ -1
Hoxd3P09027 Gm25492-201ENSMUST00000157383 129 ntBASIC8.78□□□□□ -1
Hoxd3P09027 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC8.78□□□□□ -1
Hoxd3P09027 Gm23153-201ENSMUST00000175323 313 ntBASIC8.78□□□□□ -1
Hoxd3P09027 Vmn2r-ps124-201ENSMUST00000176236 903 ntBASIC8.78□□□□□ -1
Hoxd3P09027 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Hoxd3P09027 Gm8531-201ENSMUST00000188319 893 ntBASIC8.78□□□□□ -1
Hoxd3P09027 Gm38201-201ENSMUST00000192143 387 ntBASIC8.78□□□□□ -1
Hoxd3P09027 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Hoxd3P09027 Gm38509-201ENSMUST00000197492 1150 ntTSL 1 (best) BASIC8.78□□□□□ -1
Hoxd3P09027 Gm5885-202ENSMUST00000203357 528 ntBASIC8.78□□□□□ -1
Hoxd3P09027 Gm18690-201ENSMUST00000204488 985 ntBASIC8.78□□□□□ -1
Hoxd3P09027 Gm43905-201ENSMUST00000204516 204 ntBASIC8.78□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms