Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Hspa2-201ENSMUST00000080449 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CopeO89079 Adat1-202ENSMUST00000120457 1677 ntTSL 5 BASIC11.08□□□□□ -0.64
CopeO89079 Il17ra-201ENSMUST00000002976 7752 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CopeO89079 Pklr-201ENSMUST00000047111 2787 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
CopeO89079 5830411N06Rik-203ENSMUST00000164583 3342 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
CopeO89079 Atxn2l-206ENSMUST00000206577 3894 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
CopeO89079 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CopeO89079 Gm21115-201ENSMUST00000187565 2578 ntBASIC11.08□□□□□ -0.64
CopeO89079 Trim17-201ENSMUST00000047697 3664 ntTSL 2 BASIC11.08□□□□□ -0.64
CopeO89079 Gm5308-201ENSMUST00000196752 1354 ntBASIC11.08□□□□□ -0.64
CopeO89079 Ppp2r5c-205ENSMUST00000221715 2367 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
CopeO89079 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
CopeO89079 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CopeO89079 Gm13660-201ENSMUST00000142828 722 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
CopeO89079 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC11.08□□□□□ -0.64
CopeO89079 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC11.08□□□□□ -0.64
CopeO89079 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CopeO89079 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC11.08□□□□□ -0.64
CopeO89079 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
CopeO89079 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC11.08□□□□□ -0.64
CopeO89079 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CopeO89079 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC11.08□□□□□ -0.64
CopeO89079 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC11.08□□□□□ -0.64
CopeO89079 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC11.08□□□□□ -0.64
CopeO89079 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC11.08□□□□□ -0.64
CopeO89079 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
CopeO89079 Gm19046-201ENSMUST00000221263 1298 ntBASIC11.08□□□□□ -0.64
CopeO89079 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CopeO89079 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CopeO89079 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
CopeO89079 Gm28693-201ENSMUST00000189622 2638 ntBASIC11.08□□□□□ -0.64
CopeO89079 Fcrl1-202ENSMUST00000163661 1649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
CopeO89079 Oprm1-212ENSMUST00000105603 2053 ntTSL 5 BASIC11.08□□□□□ -0.64
CopeO89079 Hps4-202ENSMUST00000112359 3345 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
CopeO89079 Cdkal1-202ENSMUST00000091674 2427 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
CopeO89079 Sik2-206ENSMUST00000176824 5369 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
CopeO89079 Clasp1-208ENSMUST00000187713 5367 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
CopeO89079 Aoc1-201ENSMUST00000031835 2675 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CopeO89079 Gm13104-201ENSMUST00000119651 1446 ntBASIC11.08□□□□□ -0.64
CopeO89079 Morc2a-201ENSMUST00000093389 5085 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CopeO89079 Akap3-203ENSMUST00000202878 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CopeO89079 Pax6-207ENSMUST00000111087 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CopeO89079 Lrrn4cl-201ENSMUST00000096257 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CopeO89079 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CopeO89079 Slc6a5-203ENSMUST00000207753 6966 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
CopeO89079 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
CopeO89079 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CopeO89079 Gm16982-201ENSMUST00000181275 2620 ntTSL 2 BASIC11.07□□□□□ -0.64
CopeO89079 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
CopeO89079 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
CopeO89079 Elovl5-201ENSMUST00000034904 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CopeO89079 Gpr39-201ENSMUST00000027581 2691 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CopeO89079 AC242690.1-202ENSMUST00000214616 1742 ntTSL 5 BASIC11.07□□□□□ -0.64
CopeO89079 Zkscan6-201ENSMUST00000018491 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CopeO89079 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CopeO89079 Dcun1d2-203ENSMUST00000110839 2937 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CopeO89079 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CopeO89079 Olfr1121-202ENSMUST00000213792 1996 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
CopeO89079 Gpr37-201ENSMUST00000054867 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CopeO89079 Osmr-201ENSMUST00000022746 5491 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
CopeO89079 Wnt5a-202ENSMUST00000112272 3650 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CopeO89079 Ap5z1-201ENSMUST00000038699 3689 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
CopeO89079 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CopeO89079 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
CopeO89079 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CopeO89079 Gm14028-201ENSMUST00000117434 479 ntBASIC11.07□□□□□ -0.64
CopeO89079 Gm23699-201ENSMUST00000158835 135 ntBASIC11.07□□□□□ -0.64
CopeO89079 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CopeO89079 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CopeO89079 Gm19412-201ENSMUST00000185388 436 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CopeO89079 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
CopeO89079 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC11.07□□□□□ -0.64
CopeO89079 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CopeO89079 Gm44155-201ENSMUST00000203923 412 ntBASIC11.07□□□□□ -0.64
CopeO89079 Fxyd1-214ENSMUST00000206328 545 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
CopeO89079 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
CopeO89079 Gm45398-201ENSMUST00000210561 165 ntBASIC11.07□□□□□ -0.64
CopeO89079 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
CopeO89079 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CopeO89079 Gm498-202ENSMUST00000152910 1507 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
CopeO89079 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CopeO89079 Pcdh11x-202ENSMUST00000113358 8607 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
CopeO89079 Btc-201ENSMUST00000121044 2876 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CopeO89079 Setbp1-201ENSMUST00000025430 9953 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
CopeO89079 5730596B20Rik-201ENSMUST00000070587 3354 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
CopeO89079 Cenpj-203ENSMUST00000225951 4756 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
CopeO89079 Rbp1-201ENSMUST00000052068 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
CopeO89079 Zfp830-201ENSMUST00000056677 1591 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
CopeO89079 Zc3h18-202ENSMUST00000093073 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
CopeO89079 Arhgap6-204ENSMUST00000112129 2487 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CopeO89079 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CopeO89079 6430562O15Rik-201ENSMUST00000180491 2488 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
CopeO89079 Doxl2-203ENSMUST00000184917 2468 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
CopeO89079 Gm26690-201ENSMUST00000181457 1997 ntTSL 5 BASIC11.07□□□□□ -0.64
CopeO89079 Spata31d1a-201ENSMUST00000066510 4261 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
CopeO89079 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
CopeO89079 Ube2l3-201ENSMUST00000090192 2609 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CopeO89079 Nktr-201ENSMUST00000035112 7022 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
CopeO89079 Rbm27-201ENSMUST00000046972 6134 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
CopeO89079 N4bp2l1-205ENSMUST00000202031 1864 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 87.1 ms