Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 4631405J19Rik-202ENSMUST00000111270 2909 ntTSL 2 BASIC8.86□□□□□ -0.99
Hmgb3O54879 Esrp2-201ENSMUST00000115979 3536 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Hmgb3O54879 Wnt5a-202ENSMUST00000112272 3650 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Hmgb3O54879 Bub1b-201ENSMUST00000038341 3668 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Hmgb3O54879 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Hmgb3O54879 Cdyl-201ENSMUST00000075220 3470 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Hmgb3O54879 Gm12333-201ENSMUST00000155508 2669 ntTSL 3 BASIC8.86□□□□□ -0.99
Hmgb3O54879 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC8.86□□□□□ -0.99
Hmgb3O54879 Zfp873-203ENSMUST00000209622 2284 ntTSL 2 BASIC8.86□□□□□ -0.99
Hmgb3O54879 Ambra1-202ENSMUST00000045705 5203 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Hmgb3O54879 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Hmgb3O54879 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC8.86□□□□□ -0.99
Hmgb3O54879 Gpr35-203ENSMUST00000169198 4214 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Hmgb3O54879 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC8.86□□□□□ -0.99
Hmgb3O54879 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC8.86□□□□□ -0.99
Hmgb3O54879 Gm11663-201ENSMUST00000117888 290 ntBASIC8.86□□□□□ -0.99
Hmgb3O54879 Gm12241-201ENSMUST00000118330 726 ntBASIC8.86□□□□□ -0.99
Hmgb3O54879 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC8.86□□□□□ -0.99
Hmgb3O54879 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC8.86□□□□□ -0.99
Hmgb3O54879 Gm15329-201ENSMUST00000121408 155 ntBASIC8.86□□□□□ -0.99
Hmgb3O54879 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC8.86□□□□□ -0.99
Hmgb3O54879 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Hmgb3O54879 Gm8459-201ENSMUST00000162504 760 ntBASIC8.86□□□□□ -0.99
Hmgb3O54879 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC8.86□□□□□ -0.99
Hmgb3O54879 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC8.86□□□□□ -0.99
Hmgb3O54879 Gm27530-201ENSMUST00000184096 98 ntBASIC8.86□□□□□ -0.99
Hmgb3O54879 Gm28746-201ENSMUST00000187453 380 ntBASIC8.86□□□□□ -0.99
Hmgb3O54879 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Hmgb3O54879 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC8.86□□□□□ -0.99
Hmgb3O54879 Gm5302-201ENSMUST00000202130 796 ntBASIC8.86□□□□□ -0.99
Hmgb3O54879 Gm17812-201ENSMUST00000204935 318 ntBASIC8.86□□□□□ -0.99
Hmgb3O54879 Gm18054-201ENSMUST00000207539 555 ntBASIC8.86□□□□□ -0.99
Hmgb3O54879 Gm5996-201ENSMUST00000211110 718 ntBASIC8.86□□□□□ -0.99
Hmgb3O54879 AC154461.3-201ENSMUST00000224831 573 ntBASIC8.86□□□□□ -0.99
Hmgb3O54879 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Hmgb3O54879 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Hmgb3O54879 Zfp521-201ENSMUST00000025288 6152 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Hmgb3O54879 Vamp5-203ENSMUST00000206154 2619 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Hmgb3O54879 Fbxl12-206ENSMUST00000148631 3756 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Hmgb3O54879 Ahcyl2-203ENSMUST00000115238 5129 ntAPPRIS ALT1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Hmgb3O54879 Herc3-202ENSMUST00000041401 4731 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Hmgb3O54879 Adat1-201ENSMUST00000034427 3159 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Hmgb3O54879 Stra6-201ENSMUST00000034880 2993 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Hmgb3O54879 Zfp7-201ENSMUST00000023179 2769 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Hmgb3O54879 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Hmgb3O54879 Reep1-203ENSMUST00000212792 3339 ntTSL 5 BASIC8.86□□□□□ -0.99
Hmgb3O54879 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Hmgb3O54879 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Hmgb3O54879 Plagl2-202ENSMUST00000109795 5571 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Hmgb3O54879 Paqr8-204ENSMUST00000189400 5330 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Hmgb3O54879 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Hmgb3O54879 Lingo1-206ENSMUST00000210032 3627 ntTSL 5 BASIC8.86□□□□□ -0.99
Hmgb3O54879 Gm44153-201ENSMUST00000204162 1580 ntBASIC8.86□□□□□ -0.99
Hmgb3O54879 Gm45699-201ENSMUST00000212838 1576 ntTSL 2 BASIC8.86□□□□□ -0.99
Hmgb3O54879 Fyn-205ENSMUST00000135242 2114 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Hmgb3O54879 Otud7b-203ENSMUST00000098849 8046 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Hmgb3O54879 Gm26673-201ENSMUST00000181126 3377 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Hmgb3O54879 Rpap2-201ENSMUST00000065422 2268 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
Hmgb3O54879 AC154377.1-201ENSMUST00000226752 4979 ntBASIC8.85□□□□□ -0.99
Hmgb3O54879 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Hmgb3O54879 C1rb-201ENSMUST00000184647 2429 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Hmgb3O54879 Sgk3-204ENSMUST00000171265 3680 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Hmgb3O54879 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Hmgb3O54879 Zfp330-201ENSMUST00000034147 1675 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Hmgb3O54879 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Hmgb3O54879 Nhsl2-201ENSMUST00000101339 12971 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Hmgb3O54879 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Hmgb3O54879 Gm43908-201ENSMUST00000205074 1472 ntBASIC8.85□□□□□ -0.99
Hmgb3O54879 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Hmgb3O54879 Ttc39a-202ENSMUST00000106618 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Hmgb3O54879 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Hmgb3O54879 Myt1l-205ENSMUST00000218583 4522 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Hmgb3O54879 Setd5-202ENSMUST00000113155 6362 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Hmgb3O54879 Gm12247-201ENSMUST00000117585 670 ntBASIC8.85□□□□□ -0.99
Hmgb3O54879 Gm13829-201ENSMUST00000119600 138 ntBASIC8.85□□□□□ -0.99
Hmgb3O54879 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Hmgb3O54879 Gm24074-201ENSMUST00000158178 260 ntBASIC8.85□□□□□ -0.99
Hmgb3O54879 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Hmgb3O54879 Gm8856-201ENSMUST00000185254 1144 ntBASIC8.85□□□□□ -0.99
Hmgb3O54879 Gm29615-201ENSMUST00000185371 697 ntBASIC8.85□□□□□ -0.99
Hmgb3O54879 Gm28224-201ENSMUST00000186078 697 ntBASIC8.85□□□□□ -0.99
Hmgb3O54879 Gm29001-201ENSMUST00000186177 697 ntBASIC8.85□□□□□ -0.99
Hmgb3O54879 Gm28292-201ENSMUST00000186593 697 ntBASIC8.85□□□□□ -0.99
Hmgb3O54879 Gm28101-201ENSMUST00000187608 697 ntBASIC8.85□□□□□ -0.99
Hmgb3O54879 Gm29076-201ENSMUST00000187689 697 ntBASIC8.85□□□□□ -0.99
Hmgb3O54879 Gm28302-201ENSMUST00000187931 697 ntBASIC8.85□□□□□ -0.99
Hmgb3O54879 Gm28646-201ENSMUST00000188220 697 ntBASIC8.85□□□□□ -0.99
Hmgb3O54879 Gm28205-201ENSMUST00000189177 697 ntBASIC8.85□□□□□ -0.99
Hmgb3O54879 Gm29032-201ENSMUST00000189797 697 ntBASIC8.85□□□□□ -0.99
Hmgb3O54879 Gm28695-201ENSMUST00000190300 697 ntBASIC8.85□□□□□ -0.99
Hmgb3O54879 Gm37448-201ENSMUST00000192795 697 ntBASIC8.85□□□□□ -0.99
Hmgb3O54879 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC8.85□□□□□ -0.99
Hmgb3O54879 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC8.85□□□□□ -0.99
Hmgb3O54879 Gm42867-201ENSMUST00000202995 469 ntBASIC8.85□□□□□ -0.99
Hmgb3O54879 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Hmgb3O54879 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Hmgb3O54879 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC8.85□□□□□ -0.99
Hmgb3O54879 Gm45575-201ENSMUST00000210283 548 ntBASIC8.85□□□□□ -0.99
Hmgb3O54879 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC8.85□□□□□ -0.99
Hmgb3O54879 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC8.85□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 99.7 ms