Protein–RNA interactions for Protein: F6SEU4

Syngap1, Ras/Rap GTPase-activating protein SynGAP, mousemouse

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syngap1F6SEU4 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Syngap1F6SEU4 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Syngap1F6SEU4 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Syngap1F6SEU4 Gm9-201ENSMUST00000101636 817 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Syngap1F6SEU4 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Syngap1F6SEU4 Rps23-ps1-201ENSMUST00000116115 425 ntBASIC12.22□□□□□ -0.45
Syngap1F6SEU4 Gm13326-201ENSMUST00000118730 1011 ntBASIC12.22□□□□□ -0.45
Syngap1F6SEU4 Gm3828-201ENSMUST00000121817 257 ntBASIC12.22□□□□□ -0.45
Syngap1F6SEU4 Rps23-ps2-201ENSMUST00000146939 432 ntBASIC12.22□□□□□ -0.45
Syngap1F6SEU4 Gm26119-201ENSMUST00000175601 104 ntBASIC12.22□□□□□ -0.45
Syngap1F6SEU4 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC12.22□□□□□ -0.45
Syngap1F6SEU4 Gm44917-201ENSMUST00000208798 520 ntBASIC12.22□□□□□ -0.45
Syngap1F6SEU4 1700018G05Rik-201ENSMUST00000211116 386 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Syngap1F6SEU4 Tmem238l-203ENSMUST00000211300 930 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Syngap1F6SEU4 AC154589.2-201ENSMUST00000228847 251 ntBASIC12.22□□□□□ -0.45
Syngap1F6SEU4 Gm8615-201ENSMUST00000025307 771 ntBASIC12.22□□□□□ -0.45
Syngap1F6SEU4 Crygd-201ENSMUST00000045028 613 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Syngap1F6SEU4 Gm23458-201ENSMUST00000083257 169 ntBASIC12.22□□□□□ -0.45
Syngap1F6SEU4 Gm10228-201ENSMUST00000089105 532 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Syngap1F6SEU4 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Syngap1F6SEU4 Il33-201ENSMUST00000025724 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Syngap1F6SEU4 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Syngap1F6SEU4 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Syngap1F6SEU4 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Syngap1F6SEU4 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Syngap1F6SEU4 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC12.22□□□□□ -0.45
Syngap1F6SEU4 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Syngap1F6SEU4 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Syngap1F6SEU4 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Syngap1F6SEU4 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Syngap1F6SEU4 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
Syngap1F6SEU4 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Syngap1F6SEU4 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Syngap1F6SEU4 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Syngap1F6SEU4 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Syngap1F6SEU4 Gm9244-201ENSMUST00000056767 2129 ntBASIC12.22□□□□□ -0.45
Syngap1F6SEU4 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Syngap1F6SEU4 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC12.22□□□□□ -0.45
Syngap1F6SEU4 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Syngap1F6SEU4 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Syngap1F6SEU4 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Syngap1F6SEU4 Klk1b26-201ENSMUST00000048945 1386 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Syngap1F6SEU4 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Syngap1F6SEU4 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Syngap1F6SEU4 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Syngap1F6SEU4 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Syngap1F6SEU4 Gm38246-201ENSMUST00000194318 1511 ntBASIC12.21□□□□□ -0.45
Syngap1F6SEU4 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Syngap1F6SEU4 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Syngap1F6SEU4 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Syngap1F6SEU4 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Syngap1F6SEU4 Gm21939-201ENSMUST00000221137 2773 ntBASIC12.21□□□□□ -0.45
Syngap1F6SEU4 1700064H15Rik-201ENSMUST00000119133 394 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Syngap1F6SEU4 Ndufb5-202ENSMUST00000121778 574 ntTSL 3 BASIC12.21□□□□□ -0.45
Syngap1F6SEU4 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Syngap1F6SEU4 Gm22344-201ENSMUST00000122642 278 ntBASIC12.21□□□□□ -0.45
Syngap1F6SEU4 Gm12853-201ENSMUST00000134971 442 ntTSL 3 BASIC12.21□□□□□ -0.45
Syngap1F6SEU4 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC12.21□□□□□ -0.45
Syngap1F6SEU4 Gm16080-201ENSMUST00000152128 692 ntTSL 3 BASIC12.21□□□□□ -0.45
Syngap1F6SEU4 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Syngap1F6SEU4 Olfr1432-201ENSMUST00000180978 930 ntAPPRIS ALT2 BASIC12.21□□□□□ -0.45
Syngap1F6SEU4 Gm26943-201ENSMUST00000182295 957 ntBASIC12.21□□□□□ -0.45
Syngap1F6SEU4 Gm4753-201ENSMUST00000188327 1255 ntBASIC12.21□□□□□ -0.45
Syngap1F6SEU4 Ighv5-12-4-201ENSMUST00000195381 353 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Syngap1F6SEU4 AC158518.1-201ENSMUST00000216435 320 ntTSL 5 BASIC12.21□□□□□ -0.45
Syngap1F6SEU4 Adig-201ENSMUST00000059889 632 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Syngap1F6SEU4 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Syngap1F6SEU4 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Syngap1F6SEU4 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Syngap1F6SEU4 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Syngap1F6SEU4 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Syngap1F6SEU4 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Syngap1F6SEU4 AC125374.1-201ENSMUST00000213573 1400 ntBASIC12.21□□□□□ -0.46
Syngap1F6SEU4 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Syngap1F6SEU4 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Syngap1F6SEU4 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC12.21□□□□□ -0.46
Syngap1F6SEU4 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
Syngap1F6SEU4 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC12.21□□□□□ -0.46
Syngap1F6SEU4 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Syngap1F6SEU4 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Syngap1F6SEU4 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Syngap1F6SEU4 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Syngap1F6SEU4 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Syngap1F6SEU4 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Syngap1F6SEU4 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Syngap1F6SEU4 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Syngap1F6SEU4 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Syngap1F6SEU4 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Syngap1F6SEU4 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Syngap1F6SEU4 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Syngap1F6SEU4 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Syngap1F6SEU4 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Syngap1F6SEU4 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Syngap1F6SEU4 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Syngap1F6SEU4 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Syngap1F6SEU4 Gm12028-201ENSMUST00000118065 436 ntBASIC12.2□□□□□ -0.46
Syngap1F6SEU4 Gm4917-201ENSMUST00000121452 650 ntBASIC12.2□□□□□ -0.46
Syngap1F6SEU4 1700095J12Rik-201ENSMUST00000124620 737 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Syngap1F6SEU4 Gm12606-202ENSMUST00000129527 1184 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Syngap1F6SEU4 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms