Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clrn2B2RVW2 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clrn2B2RVW2 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clrn2B2RVW2 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Clrn2B2RVW2 Igll1-201ENSMUST00000100136 870 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Clrn2B2RVW2 Il15ra-203ENSMUST00000114831 882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clrn2B2RVW2 Gm12916-201ENSMUST00000139012 948 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Clrn2B2RVW2 Gm13267-202ENSMUST00000150099 281 ntTSL 2 BASIC12.5□□□□□ -0.41
Clrn2B2RVW2 Eif4e1b-210ENSMUST00000152204 859 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Clrn2B2RVW2 Ube4bos3-201ENSMUST00000155845 756 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Clrn2B2RVW2 Gm24074-201ENSMUST00000158178 260 ntBASIC12.5□□□□□ -0.41
Clrn2B2RVW2 Vmn2r-ps9-201ENSMUST00000177446 1099 ntBASIC12.5□□□□□ -0.41
Clrn2B2RVW2 Gm29304-201ENSMUST00000186555 695 ntBASIC12.5□□□□□ -0.41
Clrn2B2RVW2 Gm29223-201ENSMUST00000188867 695 ntBASIC12.5□□□□□ -0.41
Clrn2B2RVW2 Gm37921-201ENSMUST00000194333 695 ntBASIC12.5□□□□□ -0.41
Clrn2B2RVW2 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC12.5□□□□□ -0.41
Clrn2B2RVW2 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC12.5□□□□□ -0.41
Clrn2B2RVW2 Gm9409-201ENSMUST00000197017 316 ntBASIC12.5□□□□□ -0.41
Clrn2B2RVW2 AC124613.1-201ENSMUST00000198711 88 ntBASIC12.5□□□□□ -0.41
Clrn2B2RVW2 Gm31314-201ENSMUST00000201435 609 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Clrn2B2RVW2 Gm45783-201ENSMUST00000210877 656 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Clrn2B2RVW2 AC141884.2-201ENSMUST00000228811 775 ntBASIC12.5□□□□□ -0.41
Clrn2B2RVW2 Ssna1-201ENSMUST00000028342 862 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clrn2B2RVW2 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clrn2B2RVW2 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Clrn2B2RVW2 Itpa-201ENSMUST00000103193 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clrn2B2RVW2 AC153524.2-201ENSMUST00000218351 1375 ntTSL 5 BASIC12.5□□□□□ -0.41
Clrn2B2RVW2 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clrn2B2RVW2 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Clrn2B2RVW2 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Clrn2B2RVW2 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clrn2B2RVW2 Gpr19-213ENSMUST00000215088 1484 ntTSL 5 BASIC12.5□□□□□ -0.41
Clrn2B2RVW2 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC12.5□□□□□ -0.41
Clrn2B2RVW2 Gm43622-201ENSMUST00000200140 2019 ntBASIC12.5□□□□□ -0.41
Clrn2B2RVW2 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Clrn2B2RVW2 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clrn2B2RVW2 Sfxn1-201ENSMUST00000021930 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clrn2B2RVW2 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clrn2B2RVW2 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clrn2B2RVW2 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clrn2B2RVW2 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clrn2B2RVW2 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clrn2B2RVW2 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Clrn2B2RVW2 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC12.49□□□□□ -0.41
Clrn2B2RVW2 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Clrn2B2RVW2 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Clrn2B2RVW2 Npy1r-201ENSMUST00000039303 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clrn2B2RVW2 Gm19817-201ENSMUST00000199764 2132 ntBASIC12.49□□□□□ -0.41
Clrn2B2RVW2 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.49□□□□□ -0.41
Clrn2B2RVW2 Gm42521-201ENSMUST00000199190 2040 ntBASIC12.49□□□□□ -0.41
Clrn2B2RVW2 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC12.49□□□□□ -0.41
Clrn2B2RVW2 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clrn2B2RVW2 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Clrn2B2RVW2 AC149588.2-201ENSMUST00000228182 1859 ntBASIC12.49□□□□□ -0.41
Clrn2B2RVW2 AC124732.3-201ENSMUST00000221835 1765 ntBASIC12.49□□□□□ -0.41
Clrn2B2RVW2 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clrn2B2RVW2 Gm13169-201ENSMUST00000122090 1459 ntBASIC12.49□□□□□ -0.41
Clrn2B2RVW2 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Clrn2B2RVW2 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clrn2B2RVW2 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Clrn2B2RVW2 Smim24-201ENSMUST00000105322 901 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clrn2B2RVW2 Gm5148-203ENSMUST00000108105 1282 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clrn2B2RVW2 Klra9-202ENSMUST00000112032 1279 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clrn2B2RVW2 Gm13281-201ENSMUST00000120871 567 ntBASIC12.49□□□□□ -0.41
Clrn2B2RVW2 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clrn2B2RVW2 Gm16228-201ENSMUST00000162286 809 ntBASIC12.49□□□□□ -0.41
Clrn2B2RVW2 Atp5e-201ENSMUST00000016396 421 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clrn2B2RVW2 Gast-201ENSMUST00000017309 460 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clrn2B2RVW2 Gm27826-201ENSMUST00000175282 255 ntBASIC12.49□□□□□ -0.41
Clrn2B2RVW2 Gm26875-201ENSMUST00000181006 950 ntBASIC12.49□□□□□ -0.41
Clrn2B2RVW2 Gm38313-201ENSMUST00000191953 1266 ntBASIC12.49□□□□□ -0.41
Clrn2B2RVW2 1700012J22Rik-201ENSMUST00000193492 830 ntBASIC12.49□□□□□ -0.41
Clrn2B2RVW2 Gm37885-202ENSMUST00000195868 685 ntTSL 3 BASIC12.49□□□□□ -0.41
Clrn2B2RVW2 A930036I15Rik-201ENSMUST00000196018 1045 ntBASIC12.49□□□□□ -0.41
Clrn2B2RVW2 Rarres2-203ENSMUST00000204182 672 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Clrn2B2RVW2 Map7-203ENSMUST00000213312 795 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Clrn2B2RVW2 AC132384.2-201ENSMUST00000218018 526 ntBASIC12.49□□□□□ -0.41
Clrn2B2RVW2 AC134537.1-201ENSMUST00000219205 265 ntBASIC12.49□□□□□ -0.41
Clrn2B2RVW2 AC163638.2-201ENSMUST00000224920 827 ntBASIC12.49□□□□□ -0.41
Clrn2B2RVW2 Prss1-201ENSMUST00000031910 805 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clrn2B2RVW2 Klra9-201ENSMUST00000071554 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clrn2B2RVW2 Speer4f1-201ENSMUST00000076099 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clrn2B2RVW2 Gm8730-201ENSMUST00000076373 954 ntBASIC12.49□□□□□ -0.41
Clrn2B2RVW2 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC12.49□□□□□ -0.41
Clrn2B2RVW2 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clrn2B2RVW2 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Clrn2B2RVW2 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Clrn2B2RVW2 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clrn2B2RVW2 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.49□□□□□ -0.41
Clrn2B2RVW2 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clrn2B2RVW2 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Clrn2B2RVW2 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC12.49□□□□□ -0.41
Clrn2B2RVW2 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clrn2B2RVW2 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clrn2B2RVW2 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clrn2B2RVW2 Prnd-201ENSMUST00000110169 1918 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Clrn2B2RVW2 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Clrn2B2RVW2 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Clrn2B2RVW2 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Clrn2B2RVW2 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms