Protein–RNA interactions for Protein: B2RUQ2

Usf3, Gene model 608, (NCBI), mousemouse

Predictions only

Length 2,221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf3B2RUQ2 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Usf3B2RUQ2 Plekha7-206ENSMUST00000182487 3476 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Usf3B2RUQ2 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Usf3B2RUQ2 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Usf3B2RUQ2 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Usf3B2RUQ2 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Usf3B2RUQ2 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Usf3B2RUQ2 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Usf3B2RUQ2 Snd1-206ENSMUST00000167201 3781 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Usf3B2RUQ2 Tie1-203ENSMUST00000184261 4234 ntTSL 2 BASIC9.07□□□□□ -0.96
Usf3B2RUQ2 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Usf3B2RUQ2 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Usf3B2RUQ2 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Usf3B2RUQ2 Tet3-202ENSMUST00000089622 10904 ntTSL 5 BASIC9.07□□□□□ -0.96
Usf3B2RUQ2 Mir453-201ENSMUST00000104732 82 ntBASIC9.07□□□□□ -0.96
Usf3B2RUQ2 Mup-ps29-201ENSMUST00000122281 202 ntBASIC9.07□□□□□ -0.96
Usf3B2RUQ2 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Usf3B2RUQ2 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC9.07□□□□□ -0.96
Usf3B2RUQ2 Hoxd3os1-203ENSMUST00000145799 511 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Usf3B2RUQ2 Pitpnm2os2-201ENSMUST00000159053 828 ntTSL 2 BASIC9.07□□□□□ -0.96
Usf3B2RUQ2 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Usf3B2RUQ2 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC9.07□□□□□ -0.96
Usf3B2RUQ2 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC9.07□□□□□ -0.96
Usf3B2RUQ2 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC9.07□□□□□ -0.96
Usf3B2RUQ2 Gm29304-201ENSMUST00000186555 695 ntBASIC9.07□□□□□ -0.96
Usf3B2RUQ2 Gm29223-201ENSMUST00000188867 695 ntBASIC9.07□□□□□ -0.96
Usf3B2RUQ2 Gm38007-201ENSMUST00000192187 313 ntBASIC9.07□□□□□ -0.96
Usf3B2RUQ2 Gm37921-201ENSMUST00000194333 695 ntBASIC9.07□□□□□ -0.96
Usf3B2RUQ2 Gm37197-201ENSMUST00000195607 401 ntBASIC9.07□□□□□ -0.96
Usf3B2RUQ2 Gm9102-201ENSMUST00000219250 465 ntBASIC9.07□□□□□ -0.96
Usf3B2RUQ2 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Usf3B2RUQ2 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Usf3B2RUQ2 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Usf3B2RUQ2 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Usf3B2RUQ2 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Usf3B2RUQ2 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Usf3B2RUQ2 Gm5171-201ENSMUST00000214944 1415 ntBASIC9.06□□□□□ -0.96
Usf3B2RUQ2 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Usf3B2RUQ2 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Usf3B2RUQ2 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Usf3B2RUQ2 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Usf3B2RUQ2 Trip11-201ENSMUST00000021605 9873 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Usf3B2RUQ2 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Usf3B2RUQ2 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Usf3B2RUQ2 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Usf3B2RUQ2 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Usf3B2RUQ2 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Usf3B2RUQ2 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Usf3B2RUQ2 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC9.06□□□□□ -0.96
Usf3B2RUQ2 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Usf3B2RUQ2 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC9.06□□□□□ -0.96
Usf3B2RUQ2 Gm13700-201ENSMUST00000118624 1128 ntBASIC9.06□□□□□ -0.96
Usf3B2RUQ2 Tsc22d1-207ENSMUST00000140251 670 ntTSL 2 BASIC9.06□□□□□ -0.96
Usf3B2RUQ2 Gm15506-201ENSMUST00000148776 1133 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Usf3B2RUQ2 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC9.06□□□□□ -0.96
Usf3B2RUQ2 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC9.06□□□□□ -0.96
Usf3B2RUQ2 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Usf3B2RUQ2 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC9.06□□□□□ -0.96
Usf3B2RUQ2 Gm23400-201ENSMUST00000174994 102 ntBASIC9.06□□□□□ -0.96
Usf3B2RUQ2 Gm26463-201ENSMUST00000175065 101 ntBASIC9.06□□□□□ -0.96
Usf3B2RUQ2 Gm24332-201ENSMUST00000175102 102 ntBASIC9.06□□□□□ -0.96
Usf3B2RUQ2 Gm25959-201ENSMUST00000175112 102 ntBASIC9.06□□□□□ -0.96
Usf3B2RUQ2 Gm22475-201ENSMUST00000175169 102 ntBASIC9.06□□□□□ -0.96
Usf3B2RUQ2 Gm22903-201ENSMUST00000175193 102 ntBASIC9.06□□□□□ -0.96
Usf3B2RUQ2 Gm25070-201ENSMUST00000175237 102 ntBASIC9.06□□□□□ -0.96
Usf3B2RUQ2 Gm24159-201ENSMUST00000175264 102 ntBASIC9.06□□□□□ -0.96
Usf3B2RUQ2 Gm25299-201ENSMUST00000175283 102 ntBASIC9.06□□□□□ -0.96
Usf3B2RUQ2 Gm23798-201ENSMUST00000175560 102 ntBASIC9.06□□□□□ -0.96
Usf3B2RUQ2 Gm23802-201ENSMUST00000175565 102 ntBASIC9.06□□□□□ -0.96
Usf3B2RUQ2 Gm27956-201ENSMUST00000175604 260 ntBASIC9.06□□□□□ -0.96
Usf3B2RUQ2 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Usf3B2RUQ2 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Usf3B2RUQ2 Gm25708-201ENSMUST00000177687 102 ntBASIC9.06□□□□□ -0.96
Usf3B2RUQ2 Gm24370-201ENSMUST00000178007 102 ntBASIC9.06□□□□□ -0.96
Usf3B2RUQ2 Gm23049-201ENSMUST00000178068 102 ntBASIC9.06□□□□□ -0.96
Usf3B2RUQ2 Gm28019-201ENSMUST00000178138 101 ntBASIC9.06□□□□□ -0.96
Usf3B2RUQ2 Gm25571-201ENSMUST00000178322 102 ntBASIC9.06□□□□□ -0.96
Usf3B2RUQ2 Gm25355-201ENSMUST00000178456 101 ntBASIC9.06□□□□□ -0.96
Usf3B2RUQ2 Gm24975-201ENSMUST00000178492 101 ntBASIC9.06□□□□□ -0.96
Usf3B2RUQ2 Gm23189-201ENSMUST00000178954 102 ntBASIC9.06□□□□□ -0.96
Usf3B2RUQ2 Gm25100-201ENSMUST00000179750 101 ntBASIC9.06□□□□□ -0.96
Usf3B2RUQ2 Gm23064-201ENSMUST00000179866 101 ntBASIC9.06□□□□□ -0.96
Usf3B2RUQ2 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC9.06□□□□□ -0.96
Usf3B2RUQ2 Gm45094-201ENSMUST00000207013 617 ntBASIC9.06□□□□□ -0.96
Usf3B2RUQ2 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC9.06□□□□□ -0.96
Usf3B2RUQ2 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Usf3B2RUQ2 AC158392.3-201ENSMUST00000224271 1284 ntBASIC9.06□□□□□ -0.96
Usf3B2RUQ2 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Usf3B2RUQ2 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Usf3B2RUQ2 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Usf3B2RUQ2 Mir326-201ENSMUST00000083637 95 ntBASIC9.06□□□□□ -0.96
Usf3B2RUQ2 Arsb-201ENSMUST00000091403 4038 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Usf3B2RUQ2 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Usf3B2RUQ2 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Usf3B2RUQ2 Dnajc14-202ENSMUST00000217745 4133 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Usf3B2RUQ2 Trappc9-202ENSMUST00000089770 4047 ntAPPRIS P4 TSL 1 (best) BASIC9.06□□□□□ -0.96
Usf3B2RUQ2 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Usf3B2RUQ2 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Usf3B2RUQ2 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Usf3B2RUQ2 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC9.06□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms