Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Gm10263-201ENSMUST00000085163 300 ntBASIC11.41□□□□□ -0.58
Usp11Q99K46 Urb1-203ENSMUST00000140920 7344 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Usp11Q99K46 Nmt1-201ENSMUST00000021314 4861 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Usp11Q99K46 Gm45041-201ENSMUST00000207366 3108 ntBASIC11.41□□□□□ -0.58
Usp11Q99K46 Ptbp3-201ENSMUST00000030076 6855 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Usp11Q99K46 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Usp11Q99K46 Dctn1-202ENSMUST00000113907 4205 ntTSL 5 BASIC11.41□□□□□ -0.58
Usp11Q99K46 Sec16a-201ENSMUST00000091252 8737 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Usp11Q99K46 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Usp11Q99K46 AU022252-203ENSMUST00000141112 7151 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Usp11Q99K46 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC11.41□□□□□ -0.58
Usp11Q99K46 Ralgps1-201ENSMUST00000042615 6029 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Usp11Q99K46 Hrh1-201ENSMUST00000088987 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Usp11Q99K46 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Usp11Q99K46 AC109214.1-201ENSMUST00000219520 1372 ntBASIC11.41□□□□□ -0.58
Usp11Q99K46 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Usp11Q99K46 Ighmbp2-201ENSMUST00000025751 3720 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Usp11Q99K46 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
Usp11Q99K46 Rnpc3-201ENSMUST00000092154 3888 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Usp11Q99K46 Gm18210-201ENSMUST00000209001 1524 ntBASIC11.4□□□□□ -0.58
Usp11Q99K46 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Usp11Q99K46 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC11.4□□□□□ -0.58
Usp11Q99K46 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Usp11Q99K46 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Usp11Q99K46 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Usp11Q99K46 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Usp11Q99K46 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Usp11Q99K46 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Usp11Q99K46 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC11.4□□□□□ -0.58
Usp11Q99K46 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC11.4□□□□□ -0.58
Usp11Q99K46 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Usp11Q99K46 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.58
Usp11Q99K46 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Usp11Q99K46 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Usp11Q99K46 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Usp11Q99K46 Gm18159-201ENSMUST00000174516 1070 ntBASIC11.4□□□□□ -0.58
Usp11Q99K46 Gm17709-201ENSMUST00000174536 1096 ntBASIC11.4□□□□□ -0.58
Usp11Q99K46 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC11.4□□□□□ -0.58
Usp11Q99K46 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC11.4□□□□□ -0.58
Usp11Q99K46 Gm8365-201ENSMUST00000197334 648 ntBASIC11.4□□□□□ -0.58
Usp11Q99K46 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Usp11Q99K46 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC11.4□□□□□ -0.58
Usp11Q99K46 AC114645.1-201ENSMUST00000215831 187 ntBASIC11.4□□□□□ -0.58
Usp11Q99K46 Gm29787-201ENSMUST00000222129 849 ntBASIC11.4□□□□□ -0.58
Usp11Q99K46 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Usp11Q99K46 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Usp11Q99K46 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Usp11Q99K46 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Usp11Q99K46 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Usp11Q99K46 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Usp11Q99K46 Gm44153-201ENSMUST00000204162 1580 ntBASIC11.4□□□□□ -0.58
Usp11Q99K46 Plxnb3-201ENSMUST00000002079 6030 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Usp11Q99K46 Gm43274-201ENSMUST00000202545 5000 ntBASIC11.4□□□□□ -0.58
Usp11Q99K46 Zdhhc21-201ENSMUST00000030110 8763 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Usp11Q99K46 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Usp11Q99K46 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Usp11Q99K46 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.59
Usp11Q99K46 F730311O21Rik-201ENSMUST00000189288 5447 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Usp11Q99K46 Elmod3-201ENSMUST00000070990 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Usp11Q99K46 Gm13384-201ENSMUST00000117166 1344 ntBASIC11.39□□□□□ -0.59
Usp11Q99K46 Gm8899-201ENSMUST00000214635 1332 ntBASIC11.39□□□□□ -0.59
Usp11Q99K46 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Usp11Q99K46 Itgad-202ENSMUST00000106237 4105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Usp11Q99K46 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Usp11Q99K46 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Usp11Q99K46 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Usp11Q99K46 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Usp11Q99K46 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Usp11Q99K46 Prdm10-204ENSMUST00000215499 6772 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Usp11Q99K46 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Usp11Q99K46 Gm26013-201ENSMUST00000104404 119 ntBASIC11.39□□□□□ -0.59
Usp11Q99K46 Snord17-201ENSMUST00000104526 238 ntBASIC11.39□□□□□ -0.59
Usp11Q99K46 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Usp11Q99K46 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Usp11Q99K46 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Usp11Q99K46 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC11.39□□□□□ -0.59
Usp11Q99K46 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Usp11Q99K46 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Usp11Q99K46 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC11.39□□□□□ -0.59
Usp11Q99K46 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC11.39□□□□□ -0.59
Usp11Q99K46 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Usp11Q99K46 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC11.39□□□□□ -0.59
Usp11Q99K46 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Usp11Q99K46 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC11.39□□□□□ -0.59
Usp11Q99K46 Gm8197-202ENSMUST00000193422 934 ntBASIC11.39□□□□□ -0.59
Usp11Q99K46 Gm43163-201ENSMUST00000196571 442 ntBASIC11.39□□□□□ -0.59
Usp11Q99K46 Igkv2-116-201ENSMUST00000199327 362 ntBASIC11.39□□□□□ -0.59
Usp11Q99K46 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC11.39□□□□□ -0.59
Usp11Q99K46 Gm42657-201ENSMUST00000201746 211 ntBASIC11.39□□□□□ -0.59
Usp11Q99K46 Specc1-214ENSMUST00000202389 3363 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Usp11Q99K46 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC11.39□□□□□ -0.59
Usp11Q99K46 Mt1-202ENSMUST00000211807 1085 ntBASIC11.39□□□□□ -0.59
Usp11Q99K46 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Usp11Q99K46 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Usp11Q99K46 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Usp11Q99K46 Usp11-201ENSMUST00000033383 3467 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Usp11Q99K46 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Usp11Q99K46 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Usp11Q99K46 Gm45161-201ENSMUST00000207316 2263 ntBASIC11.39□□□□□ -0.59
Usp11Q99K46 CT010480.4-201ENSMUST00000224654 2283 ntBASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms