Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Clrn1Q8K445 Tial1-202ENSMUST00000106226 4451 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Clrn1Q8K445 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Clrn1Q8K445 Ddx3x-201ENSMUST00000000804 4692 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Clrn1Q8K445 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Clrn1Q8K445 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Clrn1Q8K445 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Clrn1Q8K445 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Clrn1Q8K445 Pxdn-208ENSMUST00000220271 6377 ntTSL 5 BASIC10.21□□□□□ -0.77
Clrn1Q8K445 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Clrn1Q8K445 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Clrn1Q8K445 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Clrn1Q8K445 Ccdc93-201ENSMUST00000036025 7274 ntAPPRIS P4 TSL 1 (best) BASIC10.21□□□□□ -0.77
Clrn1Q8K445 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Clrn1Q8K445 Gm14807-201ENSMUST00000116640 983 ntBASIC10.21□□□□□ -0.77
Clrn1Q8K445 Gm4879-201ENSMUST00000122190 1272 ntBASIC10.21□□□□□ -0.77
Clrn1Q8K445 Gm14665-201ENSMUST00000122294 557 ntBASIC10.21□□□□□ -0.77
Clrn1Q8K445 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Clrn1Q8K445 Gm22379-201ENSMUST00000157480 131 ntBASIC10.21□□□□□ -0.77
Clrn1Q8K445 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Clrn1Q8K445 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Clrn1Q8K445 Gm24514-201ENSMUST00000174961 285 ntBASIC10.21□□□□□ -0.77
Clrn1Q8K445 Gm7985-201ENSMUST00000183329 981 ntBASIC10.21□□□□□ -0.77
Clrn1Q8K445 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC10.21□□□□□ -0.77
Clrn1Q8K445 Gm42518-201ENSMUST00000196277 938 ntBASIC10.21□□□□□ -0.77
Clrn1Q8K445 Gm43671-201ENSMUST00000200422 433 ntBASIC10.21□□□□□ -0.77
Clrn1Q8K445 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC10.21□□□□□ -0.77
Clrn1Q8K445 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Clrn1Q8K445 Gm9139-201ENSMUST00000218817 700 ntBASIC10.21□□□□□ -0.77
Clrn1Q8K445 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC10.21□□□□□ -0.77
Clrn1Q8K445 Gm4811-201ENSMUST00000220879 1220 ntBASIC10.21□□□□□ -0.77
Clrn1Q8K445 AC115304.2-201ENSMUST00000226399 332 ntBASIC10.21□□□□□ -0.77
Clrn1Q8K445 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Clrn1Q8K445 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Clrn1Q8K445 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Clrn1Q8K445 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Clrn1Q8K445 Cacna1c-202ENSMUST00000078320 8062 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Clrn1Q8K445 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Clrn1Q8K445 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Clrn1Q8K445 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Clrn1Q8K445 Gm18210-201ENSMUST00000209001 1524 ntBASIC10.21□□□□□ -0.78
Clrn1Q8K445 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Clrn1Q8K445 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Clrn1Q8K445 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC10.21□□□□□ -0.78
Clrn1Q8K445 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Clrn1Q8K445 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Clrn1Q8K445 Ttll5-205ENSMUST00000110224 4647 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Clrn1Q8K445 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC10.21□□□□□ -0.78
Clrn1Q8K445 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC10.21□□□□□ -0.78
Clrn1Q8K445 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Clrn1Q8K445 Gm38292-201ENSMUST00000192646 3045 ntBASIC10.2□□□□□ -0.78
Clrn1Q8K445 AA474408-201ENSMUST00000098110 3339 ntBASIC10.2□□□□□ -0.78
Clrn1Q8K445 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Clrn1Q8K445 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Clrn1Q8K445 Nod1-202ENSMUST00000168172 4064 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Clrn1Q8K445 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Clrn1Q8K445 Ank3-242ENSMUST00000183261 4999 ntTSL 5 BASIC10.2□□□□□ -0.78
Clrn1Q8K445 Svil-204ENSMUST00000127297 6243 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Clrn1Q8K445 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Clrn1Q8K445 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Clrn1Q8K445 Pdpk1-202ENSMUST00000102927 7161 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Clrn1Q8K445 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Clrn1Q8K445 Gm25063-201ENSMUST00000104666 94 ntBASIC10.2□□□□□ -0.78
Clrn1Q8K445 Gm17151-201ENSMUST00000105760 367 ntTSL 3 BASIC10.2□□□□□ -0.78
Clrn1Q8K445 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Clrn1Q8K445 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC10.2□□□□□ -0.78
Clrn1Q8K445 Gm12030-201ENSMUST00000121917 223 ntBASIC10.2□□□□□ -0.78
Clrn1Q8K445 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Clrn1Q8K445 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Clrn1Q8K445 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Clrn1Q8K445 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC10.2□□□□□ -0.78
Clrn1Q8K445 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Clrn1Q8K445 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Clrn1Q8K445 Gm21759-201ENSMUST00000178345 1828 ntBASIC10.2□□□□□ -0.78
Clrn1Q8K445 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC10.2□□□□□ -0.78
Clrn1Q8K445 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Clrn1Q8K445 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Clrn1Q8K445 Gm9884-201ENSMUST00000194343 1222 ntBASIC10.2□□□□□ -0.78
Clrn1Q8K445 Gm34023-201ENSMUST00000195539 217 ntBASIC10.2□□□□□ -0.78
Clrn1Q8K445 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC10.2□□□□□ -0.78
Clrn1Q8K445 Gm43375-201ENSMUST00000196705 2480 ntBASIC10.2□□□□□ -0.78
Clrn1Q8K445 Gm40414-201ENSMUST00000197608 481 ntBASIC10.2□□□□□ -0.78
Clrn1Q8K445 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Clrn1Q8K445 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Clrn1Q8K445 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Clrn1Q8K445 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC10.2□□□□□ -0.78
Clrn1Q8K445 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC10.2□□□□□ -0.78
Clrn1Q8K445 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Clrn1Q8K445 C330027C09Rik-201ENSMUST00000048374 3974 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Clrn1Q8K445 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Clrn1Q8K445 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Clrn1Q8K445 Tgfbrap1-201ENSMUST00000095014 5607 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Clrn1Q8K445 Zfp398-202ENSMUST00000114598 8328 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Clrn1Q8K445 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Clrn1Q8K445 Lrrc4-201ENSMUST00000062304 3615 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Clrn1Q8K445 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Clrn1Q8K445 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Clrn1Q8K445 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Clrn1Q8K445 Pcdhga7-201ENSMUST00000192511 4730 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Clrn1Q8K445 Pde2a-202ENSMUST00000166652 3977 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms