Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nup88Q8CEC0 Gm8723-201ENSMUST00000166076 820 ntBASIC12.78□□□□□ -0.36
Nup88Q8CEC0 Gm8701-201ENSMUST00000169259 874 ntBASIC12.78□□□□□ -0.36
Nup88Q8CEC0 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nup88Q8CEC0 Gm28833-201ENSMUST00000189671 559 ntBASIC12.78□□□□□ -0.36
Nup88Q8CEC0 Gm37638-201ENSMUST00000194337 1123 ntBASIC12.78□□□□□ -0.36
Nup88Q8CEC0 Gm38321-201ENSMUST00000195053 235 ntBASIC12.78□□□□□ -0.36
Nup88Q8CEC0 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Nup88Q8CEC0 Gm32111-201ENSMUST00000207689 846 ntBASIC12.78□□□□□ -0.36
Nup88Q8CEC0 Gm7082-201ENSMUST00000209880 969 ntBASIC12.78□□□□□ -0.36
Nup88Q8CEC0 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC12.78□□□□□ -0.36
Nup88Q8CEC0 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Nup88Q8CEC0 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Nup88Q8CEC0 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Nup88Q8CEC0 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nup88Q8CEC0 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Nup88Q8CEC0 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nup88Q8CEC0 Gm21759-201ENSMUST00000178345 1828 ntBASIC12.78□□□□□ -0.36
Nup88Q8CEC0 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nup88Q8CEC0 Hyal2-206ENSMUST00000195681 2968 ntBASIC12.78□□□□□ -0.36
Nup88Q8CEC0 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC12.77□□□□□ -0.36
Nup88Q8CEC0 Mgll-204ENSMUST00000113585 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nup88Q8CEC0 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Nup88Q8CEC0 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC12.77□□□□□ -0.36
Nup88Q8CEC0 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Nup88Q8CEC0 Armc8-202ENSMUST00000185524 2820 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Nup88Q8CEC0 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Nup88Q8CEC0 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Nup88Q8CEC0 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC12.77□□□□□ -0.36
Nup88Q8CEC0 Olfr707-205ENSMUST00000214112 1735 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Nup88Q8CEC0 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nup88Q8CEC0 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Nup88Q8CEC0 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Nup88Q8CEC0 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nup88Q8CEC0 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nup88Q8CEC0 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Nup88Q8CEC0 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nup88Q8CEC0 Gm8302-201ENSMUST00000119217 852 ntBASIC12.77□□□□□ -0.37
Nup88Q8CEC0 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nup88Q8CEC0 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Nup88Q8CEC0 Asgr1-205ENSMUST00000146411 1188 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nup88Q8CEC0 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC12.77□□□□□ -0.37
Nup88Q8CEC0 Gm17889-201ENSMUST00000198410 598 ntBASIC12.77□□□□□ -0.37
Nup88Q8CEC0 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Nup88Q8CEC0 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Nup88Q8CEC0 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nup88Q8CEC0 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nup88Q8CEC0 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nup88Q8CEC0 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nup88Q8CEC0 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nup88Q8CEC0 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Nup88Q8CEC0 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC12.77□□□□□ -0.37
Nup88Q8CEC0 AC124433.1-202ENSMUST00000224762 1535 ntBASIC12.77□□□□□ -0.37
Nup88Q8CEC0 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Nup88Q8CEC0 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Nup88Q8CEC0 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nup88Q8CEC0 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nup88Q8CEC0 Srrm4-202ENSMUST00000139425 2798 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nup88Q8CEC0 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nup88Q8CEC0 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
Nup88Q8CEC0 Gm10829-201ENSMUST00000202084 2988 ntBASIC12.76□□□□□ -0.37
Nup88Q8CEC0 Golm1-201ENSMUST00000022039 3954 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nup88Q8CEC0 Serac1-202ENSMUST00000097432 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nup88Q8CEC0 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nup88Q8CEC0 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nup88Q8CEC0 Tram2-201ENSMUST00000037998 6492 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nup88Q8CEC0 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC12.76□□□□□ -0.37
Nup88Q8CEC0 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC12.76□□□□□ -0.37
Nup88Q8CEC0 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC12.76□□□□□ -0.37
Nup88Q8CEC0 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC12.76□□□□□ -0.37
Nup88Q8CEC0 Gm11560-201ENSMUST00000117567 948 ntBASIC12.76□□□□□ -0.37
Nup88Q8CEC0 Gm12194-201ENSMUST00000117756 1012 ntBASIC12.76□□□□□ -0.37
Nup88Q8CEC0 Gm12783-201ENSMUST00000121425 397 ntBASIC12.76□□□□□ -0.37
Nup88Q8CEC0 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nup88Q8CEC0 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC12.76□□□□□ -0.37
Nup88Q8CEC0 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nup88Q8CEC0 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nup88Q8CEC0 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC12.76□□□□□ -0.37
Nup88Q8CEC0 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC12.76□□□□□ -0.37
Nup88Q8CEC0 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC12.76□□□□□ -0.37
Nup88Q8CEC0 Gm29067-201ENSMUST00000190821 470 ntBASIC12.76□□□□□ -0.37
Nup88Q8CEC0 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nup88Q8CEC0 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Nup88Q8CEC0 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Nup88Q8CEC0 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC12.76□□□□□ -0.37
Nup88Q8CEC0 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC12.76□□□□□ -0.37
Nup88Q8CEC0 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nup88Q8CEC0 Gm8325-201ENSMUST00000099086 453 ntBASIC12.76□□□□□ -0.37
Nup88Q8CEC0 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nup88Q8CEC0 Ippk-202ENSMUST00000220447 4421 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nup88Q8CEC0 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nup88Q8CEC0 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nup88Q8CEC0 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nup88Q8CEC0 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nup88Q8CEC0 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Nup88Q8CEC0 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC12.76□□□□□ -0.37
Nup88Q8CEC0 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Nup88Q8CEC0 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Nup88Q8CEC0 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Nup88Q8CEC0 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms