Protein–RNA interactions for Protein: Q8CE13

Ccdc17, Coiled-coil domain-containing protein 17, mousemouse

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc17Q8CE13 Msh3-202ENSMUST00000185852 3946 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ccdc17Q8CE13 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Ccdc17Q8CE13 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Ccdc17Q8CE13 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ccdc17Q8CE13 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ccdc17Q8CE13 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ccdc17Q8CE13 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Ccdc17Q8CE13 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 Adar-204ENSMUST00000118341 2399 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 Prss23os-202ENSMUST00000179361 1362 ntBASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 Lemd1-201ENSMUST00000112357 964 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 Nifk-202ENSMUST00000112688 849 ntTSL 5 BASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 Gm8659-201ENSMUST00000120024 1084 ntBASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 Gm5395-201ENSMUST00000121650 915 ntBASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 Pax5-209ENSMUST00000165417 1056 ntTSL 5 BASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 Cd79b-202ENSMUST00000167143 1195 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 Gm23647-201ENSMUST00000175042 109 ntBASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 Rn5s-201ENSMUST00000177555 119 ntBASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 n-R5s108-201ENSMUST00000177575 119 ntBASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 n-R5s121-201ENSMUST00000177589 119 ntBASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 n-R5s146-201ENSMUST00000177889 119 ntBASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 Gm22109-201ENSMUST00000177995 119 ntBASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 Gm22291-201ENSMUST00000178027 119 ntBASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 n-R5s141-201ENSMUST00000178066 119 ntBASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 Gm23284-201ENSMUST00000178069 119 ntBASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 n-R5s100-201ENSMUST00000178106 119 ntBASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 n-R5s111-201ENSMUST00000178203 119 ntBASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 n-R5s105-201ENSMUST00000178499 119 ntBASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 n-R5s149-201ENSMUST00000178520 119 ntBASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 n-R5s103-201ENSMUST00000178755 119 ntBASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 n-R5s123-201ENSMUST00000178804 119 ntBASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 n-R5s142-201ENSMUST00000178820 119 ntBASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 n-R5s144-201ENSMUST00000178859 119 ntBASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 n-R5s139-201ENSMUST00000178975 119 ntBASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 n-R5s134-201ENSMUST00000178983 119 ntBASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 n-R5s136-201ENSMUST00000179080 119 ntBASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 Gm25018-201ENSMUST00000179081 119 ntBASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 n-R5s104-201ENSMUST00000179107 119 ntBASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 n-R5s113-201ENSMUST00000179143 119 ntBASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 n-R5s133-201ENSMUST00000179275 119 ntBASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 n-R5s117-201ENSMUST00000179431 119 ntBASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 Gm25212-201ENSMUST00000179432 119 ntBASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 n-R5s138-201ENSMUST00000179476 119 ntBASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 n-R5s122-201ENSMUST00000179500 119 ntBASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 n-R5s143-201ENSMUST00000179542 119 ntBASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 n-R5s107-201ENSMUST00000179704 119 ntBASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 Gm26391-201ENSMUST00000179843 119 ntBASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 n-R5s110-201ENSMUST00000179995 119 ntBASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 n-R5s128-201ENSMUST00000180096 119 ntBASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 n-R5s124-201ENSMUST00000180334 119 ntBASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 Mir6973a-201ENSMUST00000183646 78 ntBASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 Ndufc1-204ENSMUST00000193279 315 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 Gm19918-201ENSMUST00000194858 400 ntBASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 Gm7238-201ENSMUST00000206467 973 ntBASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 C230062I16Rik-203ENSMUST00000208015 648 ntTSL 3 BASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 Olfr435-201ENSMUST00000058118 942 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 Krtap2-4-201ENSMUST00000074926 828 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 Prr19-201ENSMUST00000080288 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 Gm24089-201ENSMUST00000093696 109 ntBASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 Olfr1313-201ENSMUST00000099599 938 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 Slc40a1-201ENSMUST00000027137 3370 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 Rasgrp4-212ENSMUST00000204194 2993 ntTSL 5 BASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 Lao1-201ENSMUST00000058651 2349 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ccdc17Q8CE13 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Ccdc17Q8CE13 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Ccdc17Q8CE13 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.59
Ccdc17Q8CE13 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ccdc17Q8CE13 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms