Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Prpf31Q8CCF0 Gm5453-201ENSMUST00000080866 447 ntBASIC11.87□□□□□ -0.51
Prpf31Q8CCF0 Krtap12-1-201ENSMUST00000092370 656 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Prpf31Q8CCF0 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Prpf31Q8CCF0 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Prpf31Q8CCF0 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Prpf31Q8CCF0 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Prpf31Q8CCF0 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC11.87□□□□□ -0.51
Prpf31Q8CCF0 Enpp7-201ENSMUST00000092373 1370 ntAPPRIS P2 TSL 2 BASIC11.87□□□□□ -0.51
Prpf31Q8CCF0 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Prpf31Q8CCF0 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Prpf31Q8CCF0 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Prpf31Q8CCF0 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC11.87□□□□□ -0.51
Prpf31Q8CCF0 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Prpf31Q8CCF0 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Prpf31Q8CCF0 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Prpf31Q8CCF0 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Prpf31Q8CCF0 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Prpf31Q8CCF0 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Prpf31Q8CCF0 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Prpf31Q8CCF0 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Prpf31Q8CCF0 Gm15984-202ENSMUST00000156466 1534 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Prpf31Q8CCF0 Serpinb6a-203ENSMUST00000076532 1504 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Prpf31Q8CCF0 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC11.86□□□□□ -0.51
Prpf31Q8CCF0 Gm37660-201ENSMUST00000192754 1732 ntBASIC11.86□□□□□ -0.51
Prpf31Q8CCF0 Gm42858-201ENSMUST00000202512 1704 ntBASIC11.86□□□□□ -0.51
Prpf31Q8CCF0 B4galnt2-201ENSMUST00000038343 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Prpf31Q8CCF0 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Prpf31Q8CCF0 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Prpf31Q8CCF0 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
Prpf31Q8CCF0 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Prpf31Q8CCF0 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Prpf31Q8CCF0 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Prpf31Q8CCF0 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Prpf31Q8CCF0 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Prpf31Q8CCF0 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Prpf31Q8CCF0 Atad3aos-202ENSMUST00000150777 650 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Prpf31Q8CCF0 Gm5244-201ENSMUST00000164001 339 ntBASIC11.86□□□□□ -0.51
Prpf31Q8CCF0 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Prpf31Q8CCF0 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC11.86□□□□□ -0.51
Prpf31Q8CCF0 Gm5267-201ENSMUST00000191574 1045 ntBASIC11.86□□□□□ -0.51
Prpf31Q8CCF0 Gm7047-201ENSMUST00000196224 1063 ntBASIC11.86□□□□□ -0.51
Prpf31Q8CCF0 Fgfbp1-203ENSMUST00000199894 1228 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
Prpf31Q8CCF0 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC11.86□□□□□ -0.51
Prpf31Q8CCF0 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC11.86□□□□□ -0.51
Prpf31Q8CCF0 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Prpf31Q8CCF0 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Prpf31Q8CCF0 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Prpf31Q8CCF0 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC11.86□□□□□ -0.51
Prpf31Q8CCF0 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Prpf31Q8CCF0 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC11.86□□□□□ -0.51
Prpf31Q8CCF0 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Prpf31Q8CCF0 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Prpf31Q8CCF0 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Prpf31Q8CCF0 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Prpf31Q8CCF0 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Prpf31Q8CCF0 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Prpf31Q8CCF0 Atp6v0e2-201ENSMUST00000040361 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Prpf31Q8CCF0 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Prpf31Q8CCF0 Slc25a12-206ENSMUST00000151937 6351 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Prpf31Q8CCF0 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Prpf31Q8CCF0 Fcgr2b-204ENSMUST00000159969 1578 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
Prpf31Q8CCF0 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Prpf31Q8CCF0 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Prpf31Q8CCF0 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Prpf31Q8CCF0 Fam107b-202ENSMUST00000115052 861 ntTSL 3 BASIC11.85□□□□□ -0.51
Prpf31Q8CCF0 Gm13039-201ENSMUST00000118638 794 ntBASIC11.85□□□□□ -0.51
Prpf31Q8CCF0 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Prpf31Q8CCF0 Gm13817-201ENSMUST00000142249 604 ntTSL 3 BASIC11.85□□□□□ -0.51
Prpf31Q8CCF0 Aamdc-209ENSMUST00000144858 380 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Prpf31Q8CCF0 Gm16167-201ENSMUST00000160428 1065 ntBASIC11.85□□□□□ -0.51
Prpf31Q8CCF0 Has2os-202ENSMUST00000163314 633 ntTSL 3 BASIC11.85□□□□□ -0.51
Prpf31Q8CCF0 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Prpf31Q8CCF0 Platr17-201ENSMUST00000172817 807 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Prpf31Q8CCF0 n-R5s130-201ENSMUST00000178128 119 ntBASIC11.85□□□□□ -0.51
Prpf31Q8CCF0 Gm24312-201ENSMUST00000178677 119 ntBASIC11.85□□□□□ -0.51
Prpf31Q8CCF0 n-R5s106-201ENSMUST00000179060 119 ntBASIC11.85□□□□□ -0.51
Prpf31Q8CCF0 n-R5s118-201ENSMUST00000179887 119 ntBASIC11.85□□□□□ -0.51
Prpf31Q8CCF0 Gm3289-201ENSMUST00000200819 756 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Prpf31Q8CCF0 Gm43460-201ENSMUST00000202491 1057 ntBASIC11.85□□□□□ -0.51
Prpf31Q8CCF0 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Prpf31Q8CCF0 Gm45500-201ENSMUST00000211676 803 ntBASIC11.85□□□□□ -0.51
Prpf31Q8CCF0 Gm8170-201ENSMUST00000218581 945 ntBASIC11.85□□□□□ -0.51
Prpf31Q8CCF0 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Prpf31Q8CCF0 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Prpf31Q8CCF0 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Prpf31Q8CCF0 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Prpf31Q8CCF0 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Prpf31Q8CCF0 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Prpf31Q8CCF0 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Prpf31Q8CCF0 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Prpf31Q8CCF0 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC11.85□□□□□ -0.51
Prpf31Q8CCF0 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Prpf31Q8CCF0 Snx29-201ENSMUST00000096273 1622 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Prpf31Q8CCF0 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Prpf31Q8CCF0 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Prpf31Q8CCF0 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Prpf31Q8CCF0 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Prpf31Q8CCF0 Svil-211ENSMUST00000143254 6594 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Prpf31Q8CCF0 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 113.3 ms