Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Fxyd1-214ENSMUST00000206328 545 ntAPPRIS P1 TSL 3 BASIC11.14□□□□□ -0.63
Trub1Q8C0D0 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trub1Q8C0D0 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trub1Q8C0D0 Adig-201ENSMUST00000059889 632 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trub1Q8C0D0 Gm5703-201ENSMUST00000186658 3973 ntBASIC11.14□□□□□ -0.63
Trub1Q8C0D0 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trub1Q8C0D0 Gm10643-201ENSMUST00000098592 1577 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Trub1Q8C0D0 Plrg1-204ENSMUST00000150268 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trub1Q8C0D0 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trub1Q8C0D0 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trub1Q8C0D0 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Trub1Q8C0D0 Mgll-204ENSMUST00000113585 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trub1Q8C0D0 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trub1Q8C0D0 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Trub1Q8C0D0 Adgrl3-215ENSMUST00000120673 5178 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Trub1Q8C0D0 Mkl1-204ENSMUST00000134469 4392 ntTSL 5 BASIC11.14□□□□□ -0.63
Trub1Q8C0D0 Olfr1349-206ENSMUST00000213656 4492 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Trub1Q8C0D0 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trub1Q8C0D0 Gm19327-201ENSMUST00000220651 3271 ntBASIC11.13□□□□□ -0.63
Trub1Q8C0D0 Slc39a14-210ENSMUST00000152067 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trub1Q8C0D0 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Trub1Q8C0D0 Ncmap-203ENSMUST00000105858 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trub1Q8C0D0 Gm45397-201ENSMUST00000209816 1600 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trub1Q8C0D0 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trub1Q8C0D0 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Trub1Q8C0D0 Sh3gl2-204ENSMUST00000107189 3231 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trub1Q8C0D0 Tcf4-203ENSMUST00000114977 3070 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trub1Q8C0D0 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trub1Q8C0D0 Arih2-201ENSMUST00000013338 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trub1Q8C0D0 Ccdc85a-206ENSMUST00000146385 3798 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Trub1Q8C0D0 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Trub1Q8C0D0 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Trub1Q8C0D0 Slfn1-201ENSMUST00000037994 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trub1Q8C0D0 Btc-201ENSMUST00000121044 2876 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trub1Q8C0D0 Gm45699-201ENSMUST00000212838 1576 ntTSL 2 BASIC11.13□□□□□ -0.63
Trub1Q8C0D0 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trub1Q8C0D0 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trub1Q8C0D0 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trub1Q8C0D0 Mtch2-202ENSMUST00000111467 2281 ntTSL 5 BASIC11.13□□□□□ -0.63
Trub1Q8C0D0 Gm11411-201ENSMUST00000117951 719 ntBASIC11.13□□□□□ -0.63
Trub1Q8C0D0 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trub1Q8C0D0 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC11.13□□□□□ -0.63
Trub1Q8C0D0 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trub1Q8C0D0 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC11.13□□□□□ -0.63
Trub1Q8C0D0 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trub1Q8C0D0 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC11.13□□□□□ -0.63
Trub1Q8C0D0 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trub1Q8C0D0 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trub1Q8C0D0 Gm4812-201ENSMUST00000182847 993 ntBASIC11.13□□□□□ -0.63
Trub1Q8C0D0 Gm3508-201ENSMUST00000186012 792 ntBASIC11.13□□□□□ -0.63
Trub1Q8C0D0 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trub1Q8C0D0 Tcstv1-202ENSMUST00000190512 875 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trub1Q8C0D0 Nme6-206ENSMUST00000197627 905 ntTSL 3 BASIC11.13□□□□□ -0.63
Trub1Q8C0D0 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC11.13□□□□□ -0.63
Trub1Q8C0D0 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trub1Q8C0D0 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC11.13□□□□□ -0.63
Trub1Q8C0D0 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trub1Q8C0D0 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Trub1Q8C0D0 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Trub1Q8C0D0 Pygl-201ENSMUST00000071250 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trub1Q8C0D0 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Trub1Q8C0D0 Zfp330-201ENSMUST00000034147 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trub1Q8C0D0 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC11.13□□□□□ -0.63
Trub1Q8C0D0 Gm45532-201ENSMUST00000210342 3620 ntBASIC11.13□□□□□ -0.63
Trub1Q8C0D0 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trub1Q8C0D0 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trub1Q8C0D0 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trub1Q8C0D0 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trub1Q8C0D0 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trub1Q8C0D0 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trub1Q8C0D0 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trub1Q8C0D0 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trub1Q8C0D0 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trub1Q8C0D0 5730403I07Rik-201ENSMUST00000183878 2033 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trub1Q8C0D0 Usp2-203ENSMUST00000114830 2122 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trub1Q8C0D0 Gm42833-201ENSMUST00000196019 2124 ntBASIC11.12□□□□□ -0.63
Trub1Q8C0D0 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trub1Q8C0D0 9530059O14Rik-201ENSMUST00000181107 3978 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trub1Q8C0D0 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Trub1Q8C0D0 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trub1Q8C0D0 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Trub1Q8C0D0 Gm25562-201ENSMUST00000104608 133 ntBASIC11.12□□□□□ -0.63
Trub1Q8C0D0 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Trub1Q8C0D0 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trub1Q8C0D0 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trub1Q8C0D0 Aamdc-209ENSMUST00000144858 380 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trub1Q8C0D0 Gm5529-201ENSMUST00000165691 891 ntBASIC11.12□□□□□ -0.63
Trub1Q8C0D0 Gm20392-201ENSMUST00000173047 701 ntBASIC11.12□□□□□ -0.63
Trub1Q8C0D0 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trub1Q8C0D0 Gm29410-201ENSMUST00000188383 694 ntBASIC11.12□□□□□ -0.63
Trub1Q8C0D0 Gm35584-201ENSMUST00000191767 641 ntTSL 5 BASIC11.12□□□□□ -0.63
Trub1Q8C0D0 Gm37860-201ENSMUST00000195380 1034 ntBASIC11.12□□□□□ -0.63
Trub1Q8C0D0 Gm5100-201ENSMUST00000195631 589 ntBASIC11.12□□□□□ -0.63
Trub1Q8C0D0 Gm3726-201ENSMUST00000203110 785 ntBASIC11.12□□□□□ -0.63
Trub1Q8C0D0 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC11.12□□□□□ -0.63
Trub1Q8C0D0 Rp9-204ENSMUST00000216973 796 ntAPPRIS ALT2 TSL 3 BASIC11.12□□□□□ -0.63
Trub1Q8C0D0 Gm8255-201ENSMUST00000218693 305 ntBASIC11.12□□□□□ -0.63
Trub1Q8C0D0 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Trub1Q8C0D0 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trub1Q8C0D0 Eif4ebp3-201ENSMUST00000036765 744 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms