Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Usp6nlQ80XC3 Kcne3-202ENSMUST00000170954 1315 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Usp6nlQ80XC3 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC12.01□□□□□ -0.49
Usp6nlQ80XC3 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Usp6nlQ80XC3 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Usp6nlQ80XC3 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Usp6nlQ80XC3 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC12.01□□□□□ -0.49
Usp6nlQ80XC3 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Usp6nlQ80XC3 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Usp6nlQ80XC3 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Usp6nlQ80XC3 Tstd2-201ENSMUST00000107770 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Usp6nlQ80XC3 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Usp6nlQ80XC3 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Usp6nlQ80XC3 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Usp6nlQ80XC3 Fcgr2b-204ENSMUST00000159969 1578 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Usp6nlQ80XC3 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Usp6nlQ80XC3 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC12□□□□□ -0.49
Usp6nlQ80XC3 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Usp6nlQ80XC3 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Usp6nlQ80XC3 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Usp6nlQ80XC3 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Usp6nlQ80XC3 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Usp6nlQ80XC3 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Usp6nlQ80XC3 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC12□□□□□ -0.49
Usp6nlQ80XC3 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Usp6nlQ80XC3 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Usp6nlQ80XC3 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Usp6nlQ80XC3 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC12□□□□□ -0.49
Usp6nlQ80XC3 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Usp6nlQ80XC3 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC12□□□□□ -0.49
Usp6nlQ80XC3 AC122811.1-201ENSMUST00000222257 2921 ntBASIC12□□□□□ -0.49
Usp6nlQ80XC3 Upp1-202ENSMUST00000101525 1157 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Usp6nlQ80XC3 Gm15031-201ENSMUST00000121341 210 ntBASIC12□□□□□ -0.49
Usp6nlQ80XC3 Ppt1-204ENSMUST00000121870 986 ntTSL 2 BASIC12□□□□□ -0.49
Usp6nlQ80XC3 Rplp0-ps1-201ENSMUST00000122125 933 ntBASIC12□□□□□ -0.49
Usp6nlQ80XC3 Gm5244-201ENSMUST00000164001 339 ntBASIC12□□□□□ -0.49
Usp6nlQ80XC3 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC12□□□□□ -0.49
Usp6nlQ80XC3 Gm3115-202ENSMUST00000177660 618 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Usp6nlQ80XC3 Gm6337-203ENSMUST00000177662 618 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Usp6nlQ80XC3 Gm3727-202ENSMUST00000178251 618 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Usp6nlQ80XC3 Gm8756-201ENSMUST00000183250 929 ntBASIC12□□□□□ -0.49
Usp6nlQ80XC3 Gm6644-201ENSMUST00000186507 951 ntBASIC12□□□□□ -0.49
Usp6nlQ80XC3 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC12□□□□□ -0.49
Usp6nlQ80XC3 Gm8643-201ENSMUST00000195228 625 ntBASIC12□□□□□ -0.49
Usp6nlQ80XC3 Gm7047-201ENSMUST00000196224 1063 ntBASIC12□□□□□ -0.49
Usp6nlQ80XC3 Clec2h-202ENSMUST00000204416 386 ntTSL 3 BASIC12□□□□□ -0.49
Usp6nlQ80XC3 3930402G23Rik-202ENSMUST00000208615 581 ntTSL 3 BASIC12□□□□□ -0.49
Usp6nlQ80XC3 Gm45481-201ENSMUST00000209717 877 ntBASIC12□□□□□ -0.49
Usp6nlQ80XC3 AC154585.1-201ENSMUST00000218917 997 ntBASIC12□□□□□ -0.49
Usp6nlQ80XC3 AC154806.7-201ENSMUST00000227998 202 ntBASIC12□□□□□ -0.49
Usp6nlQ80XC3 Klk1b24-201ENSMUST00000073713 878 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Usp6nlQ80XC3 Klk1b21-201ENSMUST00000085455 871 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Usp6nlQ80XC3 Nutf2-ps1-201ENSMUST00000095978 864 ntAPPRIS P1 BASIC12□□□□□ -0.49
Usp6nlQ80XC3 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC12□□□□□ -0.49
Usp6nlQ80XC3 Ms4a7-203ENSMUST00000067532 1334 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Usp6nlQ80XC3 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Usp6nlQ80XC3 Srd5a3-203ENSMUST00000113507 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Usp6nlQ80XC3 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Usp6nlQ80XC3 Eif2c5-201ENSMUST00000125609 1416 ntTSL 1 (best) BASIC12□□□□□ -0.49
Usp6nlQ80XC3 Gm8094-201ENSMUST00000165136 1408 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Usp6nlQ80XC3 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC12□□□□□ -0.49
Usp6nlQ80XC3 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC12□□□□□ -0.49
Usp6nlQ80XC3 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Usp6nlQ80XC3 Hmox1-201ENSMUST00000005548 1569 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Usp6nlQ80XC3 Smok2b-201ENSMUST00000059824 1584 ntAPPRIS P1 BASIC12□□□□□ -0.49
Usp6nlQ80XC3 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC12□□□□□ -0.49
Usp6nlQ80XC3 Stx17-203ENSMUST00000107721 1771 ntTSL 1 (best) BASIC12□□□□□ -0.49
Usp6nlQ80XC3 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
Usp6nlQ80XC3 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Usp6nlQ80XC3 Gm42833-201ENSMUST00000196019 2124 ntBASIC11.99□□□□□ -0.49
Usp6nlQ80XC3 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Usp6nlQ80XC3 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Usp6nlQ80XC3 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Usp6nlQ80XC3 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC11.99□□□□□ -0.49
Usp6nlQ80XC3 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Usp6nlQ80XC3 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Usp6nlQ80XC3 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Usp6nlQ80XC3 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Usp6nlQ80XC3 4930412O13Rik-202ENSMUST00000114919 558 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
Usp6nlQ80XC3 Myl1-203ENSMUST00000120415 621 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Usp6nlQ80XC3 Gm15746-201ENSMUST00000120684 1027 ntBASIC11.99□□□□□ -0.49
Usp6nlQ80XC3 Hoxd3os1-203ENSMUST00000145799 511 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Usp6nlQ80XC3 Rpl15-ps2-201ENSMUST00000184247 613 ntBASIC11.99□□□□□ -0.49
Usp6nlQ80XC3 Gm38038-201ENSMUST00000193803 259 ntBASIC11.99□□□□□ -0.49
Usp6nlQ80XC3 5033404E19Rik-202ENSMUST00000194748 1065 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Usp6nlQ80XC3 Gm30055-201ENSMUST00000203175 803 ntBASIC11.99□□□□□ -0.49
Usp6nlQ80XC3 AC159282.1-204ENSMUST00000219472 780 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Usp6nlQ80XC3 Rhno1-207ENSMUST00000223237 1081 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Usp6nlQ80XC3 CT009713.2-201ENSMUST00000225532 1149 ntBASIC11.99□□□□□ -0.49
Usp6nlQ80XC3 Tbc1d21-201ENSMUST00000040217 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Usp6nlQ80XC3 Vps25-201ENSMUST00000007533 615 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Usp6nlQ80XC3 Gm10238-201ENSMUST00000089689 408 ntBASIC11.99□□□□□ -0.49
Usp6nlQ80XC3 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Usp6nlQ80XC3 Gm7964-201ENSMUST00000051522 1378 ntBASIC11.99□□□□□ -0.49
Usp6nlQ80XC3 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Usp6nlQ80XC3 4930555A03Rik-201ENSMUST00000196052 1556 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Usp6nlQ80XC3 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Usp6nlQ80XC3 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Usp6nlQ80XC3 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Usp6nlQ80XC3 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms