Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Gm37246-201ENSMUST00000192665 835 ntBASIC10.64□□□□□ -0.71
Scaf4Q6PFF0 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC10.64□□□□□ -0.71
Scaf4Q6PFF0 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Scaf4Q6PFF0 2310039L15Rik-203ENSMUST00000220058 727 ntTSL 5 BASIC10.64□□□□□ -0.71
Scaf4Q6PFF0 AC154276.3-201ENSMUST00000227643 998 ntBASIC10.64□□□□□ -0.71
Scaf4Q6PFF0 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Scaf4Q6PFF0 Mybpc3-201ENSMUST00000111430 4154 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Scaf4Q6PFF0 Ttpal-207ENSMUST00000171696 4522 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Scaf4Q6PFF0 Zc3hav1-202ENSMUST00000114898 3052 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Scaf4Q6PFF0 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC10.64□□□□□ -0.71
Scaf4Q6PFF0 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Scaf4Q6PFF0 Slc25a27-201ENSMUST00000024705 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Scaf4Q6PFF0 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Scaf4Q6PFF0 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Scaf4Q6PFF0 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC10.64□□□□□ -0.71
Scaf4Q6PFF0 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Scaf4Q6PFF0 Ccdc33-204ENSMUST00000119665 2552 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Scaf4Q6PFF0 Tpm3-204ENSMUST00000119570 2233 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Scaf4Q6PFF0 Gm6092-201ENSMUST00000121659 2029 ntBASIC10.63□□□□□ -0.71
Scaf4Q6PFF0 Aebp1-202ENSMUST00000109829 2541 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Scaf4Q6PFF0 Pgbd5-206ENSMUST00000172566 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Scaf4Q6PFF0 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Scaf4Q6PFF0 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Scaf4Q6PFF0 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC10.63□□□□□ -0.71
Scaf4Q6PFF0 Ccdc148-204ENSMUST00000226455 4612 ntAPPRIS ALT2 BASIC10.63□□□□□ -0.71
Scaf4Q6PFF0 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Scaf4Q6PFF0 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Scaf4Q6PFF0 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Scaf4Q6PFF0 Mup-ps26-201ENSMUST00000121751 202 ntBASIC10.63□□□□□ -0.71
Scaf4Q6PFF0 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Scaf4Q6PFF0 Gm7666-201ENSMUST00000146631 819 ntBASIC10.63□□□□□ -0.71
Scaf4Q6PFF0 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Scaf4Q6PFF0 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Scaf4Q6PFF0 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Scaf4Q6PFF0 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC10.63□□□□□ -0.71
Scaf4Q6PFF0 Gm29346-201ENSMUST00000188147 255 ntTSL 3 BASIC10.63□□□□□ -0.71
Scaf4Q6PFF0 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC10.63□□□□□ -0.71
Scaf4Q6PFF0 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC10.63□□□□□ -0.71
Scaf4Q6PFF0 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC10.63□□□□□ -0.71
Scaf4Q6PFF0 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Scaf4Q6PFF0 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC10.63□□□□□ -0.71
Scaf4Q6PFF0 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Scaf4Q6PFF0 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Scaf4Q6PFF0 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC10.63□□□□□ -0.71
Scaf4Q6PFF0 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Scaf4Q6PFF0 CU062626.3-201ENSMUST00000225522 1411 ntBASIC10.63□□□□□ -0.71
Scaf4Q6PFF0 Nr2c1-201ENSMUST00000092213 2376 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Scaf4Q6PFF0 Dnm2-202ENSMUST00000091087 3450 ntAPPRIS ALT1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Scaf4Q6PFF0 Mkrn1-204ENSMUST00000114823 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Scaf4Q6PFF0 Gk2-201ENSMUST00000059657 1880 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Scaf4Q6PFF0 Gm37583-201ENSMUST00000195460 2487 ntBASIC10.63□□□□□ -0.71
Scaf4Q6PFF0 Styx-205ENSMUST00000226873 12974 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Scaf4Q6PFF0 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Scaf4Q6PFF0 Adgrf3-201ENSMUST00000088117 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Scaf4Q6PFF0 Dhdds-209ENSMUST00000144668 3219 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Scaf4Q6PFF0 Pear1-201ENSMUST00000029714 4260 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Scaf4Q6PFF0 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Scaf4Q6PFF0 Ik-201ENSMUST00000007042 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Scaf4Q6PFF0 Ahrr-202ENSMUST00000109640 2419 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Scaf4Q6PFF0 Stra6-213ENSMUST00000167479 2871 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Scaf4Q6PFF0 Ccdc15-202ENSMUST00000213633 3331 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Scaf4Q6PFF0 Trim36-202ENSMUST00000167364 4543 ntTSL 5 BASIC10.63□□□□□ -0.71
Scaf4Q6PFF0 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Scaf4Q6PFF0 Top1-201ENSMUST00000109468 3856 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Scaf4Q6PFF0 Ighmbp2-201ENSMUST00000025751 3720 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Scaf4Q6PFF0 Gm9220-201ENSMUST00000190721 2544 ntBASIC10.62□□□□□ -0.71
Scaf4Q6PFF0 Olfr1490-202ENSMUST00000213900 5165 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Scaf4Q6PFF0 CT025639.2-202ENSMUST00000225298 1630 ntBASIC10.62□□□□□ -0.71
Scaf4Q6PFF0 Zfp804b-202ENSMUST00000200317 4430 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Scaf4Q6PFF0 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Scaf4Q6PFF0 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Scaf4Q6PFF0 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC10.62□□□□□ -0.71
Scaf4Q6PFF0 Anks1b-203ENSMUST00000099368 2799 ntTSL 5 BASIC10.62□□□□□ -0.71
Scaf4Q6PFF0 Arih2-201ENSMUST00000013338 3924 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Scaf4Q6PFF0 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Scaf4Q6PFF0 Kif3a-202ENSMUST00000118353 2178 ntTSL 5 BASIC10.62□□□□□ -0.71
Scaf4Q6PFF0 Abcg1-201ENSMUST00000024829 3610 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Scaf4Q6PFF0 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Scaf4Q6PFF0 Specc1l-201ENSMUST00000040105 5928 ntTSL 5 BASIC10.62□□□□□ -0.71
Scaf4Q6PFF0 Cyp2g1-201ENSMUST00000040944 1896 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Scaf4Q6PFF0 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Scaf4Q6PFF0 Rgs12-204ENSMUST00000114281 3439 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Scaf4Q6PFF0 Gm23272-201ENSMUST00000104053 129 ntBASIC10.62□□□□□ -0.71
Scaf4Q6PFF0 Adig-202ENSMUST00000109484 488 ntTSL 2 BASIC10.62□□□□□ -0.71
Scaf4Q6PFF0 Gm11956-201ENSMUST00000119525 512 ntBASIC10.62□□□□□ -0.71
Scaf4Q6PFF0 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC10.62□□□□□ -0.71
Scaf4Q6PFF0 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC10.62□□□□□ -0.71
Scaf4Q6PFF0 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Scaf4Q6PFF0 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC10.62□□□□□ -0.71
Scaf4Q6PFF0 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC10.62□□□□□ -0.71
Scaf4Q6PFF0 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC10.62□□□□□ -0.71
Scaf4Q6PFF0 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC10.62□□□□□ -0.71
Scaf4Q6PFF0 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC10.62□□□□□ -0.71
Scaf4Q6PFF0 Gm44315-201ENSMUST00000203041 219 ntBASIC10.62□□□□□ -0.71
Scaf4Q6PFF0 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC10.62□□□□□ -0.71
Scaf4Q6PFF0 AC126459.1-201ENSMUST00000214791 2123 ntBASIC10.62□□□□□ -0.71
Scaf4Q6PFF0 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Scaf4Q6PFF0 Adig-201ENSMUST00000059889 632 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Scaf4Q6PFF0 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC10.62□□□□□ -0.71
Scaf4Q6PFF0 Gm5451-201ENSMUST00000080545 579 ntBASIC10.62□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms