Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Ift88Q61371 Celf2-224ENSMUST00000182879 2223 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ift88Q61371 Gm26822-201ENSMUST00000181732 3374 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ift88Q61371 Fam53c-202ENSMUST00000097622 4256 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ift88Q61371 Olfr707-204ENSMUST00000213251 1777 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Ift88Q61371 Gpr39-201ENSMUST00000027581 2691 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ift88Q61371 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ift88Q61371 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ift88Q61371 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ift88Q61371 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Ift88Q61371 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ift88Q61371 Slc18a1-201ENSMUST00000037478 3115 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ift88Q61371 Tgfbrap1-201ENSMUST00000095014 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ift88Q61371 Gm7405-201ENSMUST00000121476 1337 ntBASIC11.91□□□□□ -0.5
Ift88Q61371 Lpxn-201ENSMUST00000025601 1675 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ift88Q61371 Serpina3g-201ENSMUST00000043315 1803 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ift88Q61371 Camk2g-201ENSMUST00000071816 3703 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ift88Q61371 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ift88Q61371 Osbpl7-206ENSMUST00000168565 3535 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Ift88Q61371 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Ift88Q61371 Gm3551-201ENSMUST00000190750 664 ntBASIC11.91□□□□□ -0.5
Ift88Q61371 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC11.91□□□□□ -0.5
Ift88Q61371 Gm9555-201ENSMUST00000200908 583 ntBASIC11.91□□□□□ -0.5
Ift88Q61371 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC11.91□□□□□ -0.5
Ift88Q61371 Fxyd1-214ENSMUST00000206328 545 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
Ift88Q61371 CT485606.1-201ENSMUST00000213187 878 ntBASIC11.91□□□□□ -0.5
Ift88Q61371 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC11.91□□□□□ -0.5
Ift88Q61371 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ift88Q61371 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Ift88Q61371 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ift88Q61371 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Ift88Q61371 Olfr1199-201ENSMUST00000099813 933 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Ift88Q61371 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ift88Q61371 Prkx-201ENSMUST00000036333 4146 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ift88Q61371 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Ift88Q61371 Pop1-202ENSMUST00000079028 3275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ift88Q61371 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Ift88Q61371 Baat-201ENSMUST00000043056 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ift88Q61371 Gm15631-201ENSMUST00000142962 2436 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ift88Q61371 Pax6-207ENSMUST00000111087 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ift88Q61371 Dhdds-209ENSMUST00000144668 3219 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ift88Q61371 C920021L13Rik-201ENSMUST00000120398 1723 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ift88Q61371 4732487G21Rik-201ENSMUST00000181495 2664 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ift88Q61371 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Ift88Q61371 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC11.91□□□□□ -0.5
Ift88Q61371 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC11.91□□□□□ -0.5
Ift88Q61371 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ift88Q61371 Gm15832-201ENSMUST00000146314 1832 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ift88Q61371 Zfyve1-201ENSMUST00000048319 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ift88Q61371 Hdac9-206ENSMUST00000209990 3072 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Ift88Q61371 Tro-201ENSMUST00000087253 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ift88Q61371 C1rb-201ENSMUST00000184647 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ift88Q61371 Lrrn4cl-201ENSMUST00000096257 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ift88Q61371 Mon2-201ENSMUST00000037557 5511 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ift88Q61371 Gm45397-201ENSMUST00000209816 1600 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ift88Q61371 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ift88Q61371 Elf5-206ENSMUST00000164172 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ift88Q61371 Gm44445-201ENSMUST00000204075 2683 ntBASIC11.9□□□□□ -0.5
Ift88Q61371 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC11.9□□□□□ -0.5
Ift88Q61371 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Ift88Q61371 Arhgef10-202ENSMUST00000110800 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ift88Q61371 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Ift88Q61371 Gm364-201ENSMUST00000114725 2156 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Ift88Q61371 Gm4909-201ENSMUST00000118749 794 ntBASIC11.9□□□□□ -0.5
Ift88Q61371 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC11.9□□□□□ -0.5
Ift88Q61371 Plrg1-204ENSMUST00000150268 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ift88Q61371 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC11.9□□□□□ -0.5
Ift88Q61371 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC11.9□□□□□ -0.5
Ift88Q61371 Gm16165-201ENSMUST00000160140 795 ntBASIC11.9□□□□□ -0.5
Ift88Q61371 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Ift88Q61371 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Ift88Q61371 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC11.9□□□□□ -0.5
Ift88Q61371 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ift88Q61371 Gm16982-201ENSMUST00000181275 2620 ntTSL 2 BASIC11.9□□□□□ -0.5
Ift88Q61371 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC11.9□□□□□ -0.5
Ift88Q61371 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC11.9□□□□□ -0.5
Ift88Q61371 Gm38025-201ENSMUST00000193926 2308 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ift88Q61371 Gm38312-201ENSMUST00000195426 1746 ntBASIC11.9□□□□□ -0.5
Ift88Q61371 Gm7047-201ENSMUST00000196224 1063 ntBASIC11.9□□□□□ -0.5
Ift88Q61371 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Ift88Q61371 Gm44421-201ENSMUST00000205064 1221 ntBASIC11.9□□□□□ -0.5
Ift88Q61371 AC115122.1-201ENSMUST00000224850 1040 ntBASIC11.9□□□□□ -0.5
Ift88Q61371 AC159196.1-201ENSMUST00000225524 377 ntBASIC11.9□□□□□ -0.5
Ift88Q61371 CT025618.1-203ENSMUST00000227008 589 ntBASIC11.9□□□□□ -0.5
Ift88Q61371 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ift88Q61371 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ift88Q61371 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Ift88Q61371 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ift88Q61371 Lrfn5-202ENSMUST00000119481 3615 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ift88Q61371 Slc25a12-206ENSMUST00000151937 6351 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ift88Q61371 Gm37516-201ENSMUST00000192593 1954 ntBASIC11.9□□□□□ -0.5
Ift88Q61371 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Ift88Q61371 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ift88Q61371 Hspa2-201ENSMUST00000080449 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ift88Q61371 Edaradd-201ENSMUST00000179308 6668 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Ift88Q61371 Gpm6b-207ENSMUST00000112229 3203 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Ift88Q61371 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.51
Ift88Q61371 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.51
Ift88Q61371 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Ift88Q61371 Fcrl1-202ENSMUST00000163661 1649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms