Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 4930579F01Rik-201ENSMUST00000012186 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps54Q5SPW0 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Vps54Q5SPW0 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Vps54Q5SPW0 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vps54Q5SPW0 Gm22937-201ENSMUST00000103954 131 ntBASIC12.97□□□□□ -0.33
Vps54Q5SPW0 Gm13600-201ENSMUST00000117949 744 ntBASIC12.97□□□□□ -0.33
Vps54Q5SPW0 Olfr29-ps1-201ENSMUST00000117959 963 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Vps54Q5SPW0 Gm11578-201ENSMUST00000118530 459 ntBASIC12.97□□□□□ -0.33
Vps54Q5SPW0 Gm15031-201ENSMUST00000121341 210 ntBASIC12.97□□□□□ -0.33
Vps54Q5SPW0 Gm12950-201ENSMUST00000121683 417 ntBASIC12.97□□□□□ -0.33
Vps54Q5SPW0 Gm15620-201ENSMUST00000122949 270 ntBASIC12.97□□□□□ -0.33
Vps54Q5SPW0 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vps54Q5SPW0 Gm16288-201ENSMUST00000137940 367 ntBASIC12.97□□□□□ -0.33
Vps54Q5SPW0 Gm12426-201ENSMUST00000153083 371 ntTSL 5 BASIC12.97□□□□□ -0.33
Vps54Q5SPW0 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vps54Q5SPW0 Gm24346-201ENSMUST00000158712 194 ntBASIC12.97□□□□□ -0.33
Vps54Q5SPW0 Gm16547-201ENSMUST00000159474 293 ntBASIC12.97□□□□□ -0.33
Vps54Q5SPW0 Bnip2-208ENSMUST00000165389 945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps54Q5SPW0 Gm17070-201ENSMUST00000170463 784 ntBASIC12.97□□□□□ -0.33
Vps54Q5SPW0 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Vps54Q5SPW0 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vps54Q5SPW0 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps54Q5SPW0 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps54Q5SPW0 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps54Q5SPW0 Hcst-201ENSMUST00000075062 442 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps54Q5SPW0 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Vps54Q5SPW0 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps54Q5SPW0 Gemin8-202ENSMUST00000087169 1928 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps54Q5SPW0 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.97□□□□□ -0.33
Vps54Q5SPW0 Gm37368-201ENSMUST00000193173 3212 ntBASIC12.97□□□□□ -0.33
Vps54Q5SPW0 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps54Q5SPW0 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vps54Q5SPW0 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Vps54Q5SPW0 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Vps54Q5SPW0 Gm37697-201ENSMUST00000195680 1844 ntBASIC12.97□□□□□ -0.33
Vps54Q5SPW0 Gm44415-201ENSMUST00000204151 2112 ntBASIC12.97□□□□□ -0.33
Vps54Q5SPW0 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps54Q5SPW0 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vps54Q5SPW0 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Vps54Q5SPW0 Mpp4-203ENSMUST00000114275 2982 ntAPPRIS P4 TSL 2 BASIC12.96□□□□□ -0.33
Vps54Q5SPW0 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vps54Q5SPW0 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Vps54Q5SPW0 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Vps54Q5SPW0 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vps54Q5SPW0 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vps54Q5SPW0 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC12.96□□□□□ -0.33
Vps54Q5SPW0 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vps54Q5SPW0 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Vps54Q5SPW0 Gm12969-201ENSMUST00000120199 1004 ntBASIC12.96□□□□□ -0.33
Vps54Q5SPW0 Gm14993-201ENSMUST00000121180 164 ntBASIC12.96□□□□□ -0.33
Vps54Q5SPW0 Olfr527-201ENSMUST00000172230 978 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Vps54Q5SPW0 Gm18201-201ENSMUST00000174735 875 ntBASIC12.96□□□□□ -0.33
Vps54Q5SPW0 Gm22876-201ENSMUST00000175450 298 ntBASIC12.96□□□□□ -0.33
Vps54Q5SPW0 Gm26272-201ENSMUST00000179241 132 ntBASIC12.96□□□□□ -0.33
Vps54Q5SPW0 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC12.96□□□□□ -0.33
Vps54Q5SPW0 Gm38321-201ENSMUST00000195053 235 ntBASIC12.96□□□□□ -0.33
Vps54Q5SPW0 Gm44155-201ENSMUST00000203923 412 ntBASIC12.96□□□□□ -0.33
Vps54Q5SPW0 Gm44647-201ENSMUST00000207402 428 ntBASIC12.96□□□□□ -0.33
Vps54Q5SPW0 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC12.96□□□□□ -0.33
Vps54Q5SPW0 AC168279.1-201ENSMUST00000214611 382 ntBASIC12.96□□□□□ -0.33
Vps54Q5SPW0 AC154436.1-201ENSMUST00000227272 782 ntBASIC12.96□□□□□ -0.33
Vps54Q5SPW0 Gm25201-201ENSMUST00000083093 170 ntBASIC12.96□□□□□ -0.33
Vps54Q5SPW0 Taar5-201ENSMUST00000092659 1014 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Vps54Q5SPW0 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vps54Q5SPW0 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Vps54Q5SPW0 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC12.96□□□□□ -0.34
Vps54Q5SPW0 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Vps54Q5SPW0 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Vps54Q5SPW0 Oscp1-203ENSMUST00000143712 1473 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Vps54Q5SPW0 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Vps54Q5SPW0 Ttc39a-202ENSMUST00000106618 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Vps54Q5SPW0 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC12.96□□□□□ -0.34
Vps54Q5SPW0 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Vps54Q5SPW0 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.96□□□□□ -0.34
Vps54Q5SPW0 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Vps54Q5SPW0 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Vps54Q5SPW0 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vps54Q5SPW0 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vps54Q5SPW0 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vps54Q5SPW0 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Vps54Q5SPW0 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC12.95□□□□□ -0.34
Vps54Q5SPW0 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vps54Q5SPW0 Mei4-203ENSMUST00000189832 2578 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vps54Q5SPW0 Gm19951-201ENSMUST00000222616 1328 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Vps54Q5SPW0 Eif2s2-201ENSMUST00000099173 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vps54Q5SPW0 Plekha7-206ENSMUST00000182487 3476 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Vps54Q5SPW0 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Vps54Q5SPW0 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Vps54Q5SPW0 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Vps54Q5SPW0 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vps54Q5SPW0 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Vps54Q5SPW0 Gm18210-201ENSMUST00000209001 1524 ntBASIC12.95□□□□□ -0.34
Vps54Q5SPW0 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Vps54Q5SPW0 Gm11628-201ENSMUST00000117568 171 ntBASIC12.95□□□□□ -0.34
Vps54Q5SPW0 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC12.95□□□□□ -0.34
Vps54Q5SPW0 Selenot-ps-201ENSMUST00000119098 593 ntBASIC12.95□□□□□ -0.34
Vps54Q5SPW0 Gm11340-201ENSMUST00000119226 412 ntBASIC12.95□□□□□ -0.34
Vps54Q5SPW0 Gm14113-201ENSMUST00000121399 976 ntBASIC12.95□□□□□ -0.34
Vps54Q5SPW0 7330404K18Rik-201ENSMUST00000125558 487 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Vps54Q5SPW0 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms