Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC9.95□□□□□ -0.82
Spg11Q3UHA3 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Spg11Q3UHA3 Ucp1-201ENSMUST00000034146 1636 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Spg11Q3UHA3 Ndufa9-203ENSMUST00000205002 1445 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Spg11Q3UHA3 Gm23027-201ENSMUST00000158771 158 ntBASIC9.95□□□□□ -0.82
Spg11Q3UHA3 Vmn2r-ps13-201ENSMUST00000176920 606 ntBASIC9.95□□□□□ -0.82
Spg11Q3UHA3 Gm26810-201ENSMUST00000181153 1106 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Spg11Q3UHA3 Gm17828-201ENSMUST00000183380 799 ntBASIC9.95□□□□□ -0.82
Spg11Q3UHA3 Mir6940-201ENSMUST00000183447 70 ntBASIC9.95□□□□□ -0.82
Spg11Q3UHA3 Gm28281-201ENSMUST00000185658 187 ntBASIC9.95□□□□□ -0.82
Spg11Q3UHA3 Gm29200-201ENSMUST00000188118 1085 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Spg11Q3UHA3 Gm38258-201ENSMUST00000191792 675 ntTSL 3 BASIC9.95□□□□□ -0.82
Spg11Q3UHA3 Gm43539-201ENSMUST00000196190 363 ntTSL 3 BASIC9.95□□□□□ -0.82
Spg11Q3UHA3 Gm42867-201ENSMUST00000202995 469 ntBASIC9.95□□□□□ -0.82
Spg11Q3UHA3 Nps-203ENSMUST00000210907 1206 ntTSL 5 BASIC9.95□□□□□ -0.82
Spg11Q3UHA3 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC9.95□□□□□ -0.82
Spg11Q3UHA3 AC161172.1-201ENSMUST00000227801 486 ntBASIC9.95□□□□□ -0.82
Spg11Q3UHA3 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Spg11Q3UHA3 Gm32255-201ENSMUST00000219456 1349 ntBASIC9.95□□□□□ -0.82
Spg11Q3UHA3 Bgn-207ENSMUST00000169489 1574 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
Spg11Q3UHA3 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC9.95□□□□□ -0.82
Spg11Q3UHA3 Etfbkmt-201ENSMUST00000047531 1562 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Spg11Q3UHA3 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Spg11Q3UHA3 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Spg11Q3UHA3 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Spg11Q3UHA3 Picalm-201ENSMUST00000049537 3528 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Spg11Q3UHA3 Gm18901-201ENSMUST00000197840 1444 ntBASIC9.95□□□□□ -0.82
Spg11Q3UHA3 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Spg11Q3UHA3 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC9.95□□□□□ -0.82
Spg11Q3UHA3 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Spg11Q3UHA3 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Spg11Q3UHA3 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Spg11Q3UHA3 Gm14856-201ENSMUST00000121548 613 ntBASIC9.95□□□□□ -0.82
Spg11Q3UHA3 Gm18182-201ENSMUST00000191380 1251 ntBASIC9.95□□□□□ -0.82
Spg11Q3UHA3 Apoc1-204ENSMUST00000207978 339 ntTSL 3 BASIC9.95□□□□□ -0.82
Spg11Q3UHA3 Gm19990-201ENSMUST00000219468 1224 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Spg11Q3UHA3 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Spg11Q3UHA3 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Spg11Q3UHA3 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Spg11Q3UHA3 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Spg11Q3UHA3 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Spg11Q3UHA3 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Spg11Q3UHA3 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Spg11Q3UHA3 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Spg11Q3UHA3 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Spg11Q3UHA3 Il1f5-206ENSMUST00000168941 1722 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Spg11Q3UHA3 Txndc16-203ENSMUST00000123879 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Spg11Q3UHA3 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC9.94□□□□□ -0.82
Spg11Q3UHA3 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Spg11Q3UHA3 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Spg11Q3UHA3 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Spg11Q3UHA3 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Spg11Q3UHA3 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Spg11Q3UHA3 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Spg11Q3UHA3 Phyhd1-203ENSMUST00000113643 1195 ntTSL 5 BASIC9.94□□□□□ -0.82
Spg11Q3UHA3 Gm12619-201ENSMUST00000117369 385 ntBASIC9.94□□□□□ -0.82
Spg11Q3UHA3 Bud31-207ENSMUST00000162594 867 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
Spg11Q3UHA3 Gm5801-201ENSMUST00000182247 780 ntBASIC9.94□□□□□ -0.82
Spg11Q3UHA3 Tmem265-202ENSMUST00000190278 587 ntTSL 3 BASIC9.94□□□□□ -0.82
Spg11Q3UHA3 Gm38191-201ENSMUST00000194509 770 ntTSL 5 BASIC9.94□□□□□ -0.82
Spg11Q3UHA3 Gm37860-201ENSMUST00000195380 1034 ntBASIC9.94□□□□□ -0.82
Spg11Q3UHA3 CT009539.1-201ENSMUST00000226465 220 ntBASIC9.94□□□□□ -0.82
Spg11Q3UHA3 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Spg11Q3UHA3 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC9.94□□□□□ -0.82
Spg11Q3UHA3 Gm43868-201ENSMUST00000205187 2114 ntBASIC9.94□□□□□ -0.82
Spg11Q3UHA3 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Spg11Q3UHA3 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Spg11Q3UHA3 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Spg11Q3UHA3 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Spg11Q3UHA3 Olfr463-202ENSMUST00000215150 2031 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Spg11Q3UHA3 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Spg11Q3UHA3 Mup1-202ENSMUST00000103012 927 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Spg11Q3UHA3 Mup16-202ENSMUST00000107483 927 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Spg11Q3UHA3 Mup17-201ENSMUST00000107484 927 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
Spg11Q3UHA3 Scgb1b30-201ENSMUST00000108083 491 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Spg11Q3UHA3 Gm15516-201ENSMUST00000117292 193 ntBASIC9.94□□□□□ -0.82
Spg11Q3UHA3 Gm9434-201ENSMUST00000118975 813 ntBASIC9.94□□□□□ -0.82
Spg11Q3UHA3 Gm15347-201ENSMUST00000145372 385 ntTSL 3 BASIC9.94□□□□□ -0.82
Spg11Q3UHA3 Gm13405-201ENSMUST00000146769 708 ntTSL 3 BASIC9.94□□□□□ -0.82
Spg11Q3UHA3 Ube4bos2-201ENSMUST00000154000 317 ntTSL 3 BASIC9.94□□□□□ -0.82
Spg11Q3UHA3 Gm9553-201ENSMUST00000185703 996 ntBASIC9.94□□□□□ -0.82
Spg11Q3UHA3 Gm10120-201ENSMUST00000219845 357 ntBASIC9.94□□□□□ -0.82
Spg11Q3UHA3 AC113282.4-201ENSMUST00000225273 903 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Spg11Q3UHA3 Trap1a-201ENSMUST00000054534 1178 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Spg11Q3UHA3 Mup2-201ENSMUST00000074700 927 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Spg11Q3UHA3 Gm6028-201ENSMUST00000077111 574 ntBASIC9.94□□□□□ -0.82
Spg11Q3UHA3 Mup7-201ENSMUST00000079697 927 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Spg11Q3UHA3 Mup19-201ENSMUST00000080606 927 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Spg11Q3UHA3 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Spg11Q3UHA3 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Spg11Q3UHA3 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC9.94□□□□□ -0.82
Spg11Q3UHA3 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Spg11Q3UHA3 Gm44629-201ENSMUST00000206951 1840 ntBASIC9.94□□□□□ -0.82
Spg11Q3UHA3 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC9.94□□□□□ -0.82
Spg11Q3UHA3 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Spg11Q3UHA3 Gm44547-201ENSMUST00000207793 1446 ntBASIC9.94□□□□□ -0.82
Spg11Q3UHA3 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Spg11Q3UHA3 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC9.93□□□□□ -0.82
Spg11Q3UHA3 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Spg11Q3UHA3 AC154640.1-203ENSMUST00000228316 1618 ntBASIC9.93□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms