Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Ebf1Q07802 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Ebf1Q07802 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Ebf1Q07802 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Ebf1Q07802 AC125409.1-201ENSMUST00000223213 3370 ntBASIC11.03□□□□□ -0.64
Ebf1Q07802 Gm42602-201ENSMUST00000200288 3224 ntBASIC11.03□□□□□ -0.64
Ebf1Q07802 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Ebf1Q07802 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Ebf1Q07802 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Ebf1Q07802 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ebf1Q07802 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC11.03□□□□□ -0.64
Ebf1Q07802 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ebf1Q07802 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Ebf1Q07802 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ebf1Q07802 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Ebf1Q07802 Gm23595-201ENSMUST00000104306 130 ntBASIC11.03□□□□□ -0.64
Ebf1Q07802 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
Ebf1Q07802 Gm12418-201ENSMUST00000118116 942 ntBASIC11.03□□□□□ -0.64
Ebf1Q07802 Gm12461-201ENSMUST00000120231 1239 ntBASIC11.03□□□□□ -0.64
Ebf1Q07802 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Ebf1Q07802 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC11.03□□□□□ -0.64
Ebf1Q07802 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
Ebf1Q07802 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC11.03□□□□□ -0.64
Ebf1Q07802 Ly6e-207ENSMUST00000187606 735 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Ebf1Q07802 Gm17796-201ENSMUST00000189015 1213 ntBASIC11.03□□□□□ -0.64
Ebf1Q07802 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Ebf1Q07802 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Ebf1Q07802 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
Ebf1Q07802 AI839979-201ENSMUST00000200738 654 ntTSL 2 BASIC11.03□□□□□ -0.64
Ebf1Q07802 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC11.03□□□□□ -0.64
Ebf1Q07802 Nps-202ENSMUST00000210697 1082 ntTSL 5 BASIC11.03□□□□□ -0.64
Ebf1Q07802 Gm7192-201ENSMUST00000210793 1137 ntBASIC11.03□□□□□ -0.64
Ebf1Q07802 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Ebf1Q07802 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC11.03□□□□□ -0.64
Ebf1Q07802 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Ebf1Q07802 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ebf1Q07802 Tex101-201ENSMUST00000078001 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ebf1Q07802 Olfr669-201ENSMUST00000098164 954 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Ebf1Q07802 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Ebf1Q07802 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Ebf1Q07802 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ebf1Q07802 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ebf1Q07802 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ebf1Q07802 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Ebf1Q07802 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ebf1Q07802 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ebf1Q07802 Gm44369-201ENSMUST00000204543 2175 ntBASIC11.03□□□□□ -0.64
Ebf1Q07802 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
Ebf1Q07802 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Ebf1Q07802 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Ebf1Q07802 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
Ebf1Q07802 Gm12912-201ENSMUST00000121596 1381 ntBASIC11.03□□□□□ -0.64
Ebf1Q07802 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Ebf1Q07802 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC11.02□□□□□ -0.64
Ebf1Q07802 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Ebf1Q07802 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Ebf1Q07802 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Ebf1Q07802 Gm14005-209ENSMUST00000224993 1832 ntBASIC11.02□□□□□ -0.64
Ebf1Q07802 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Ebf1Q07802 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Ebf1Q07802 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC11.02□□□□□ -0.64
Ebf1Q07802 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC11.02□□□□□ -0.64
Ebf1Q07802 Erich3-203ENSMUST00000189969 3460 ntBASIC11.02□□□□□ -0.65
Ebf1Q07802 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ebf1Q07802 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ebf1Q07802 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ebf1Q07802 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ebf1Q07802 Eef1akmt4-202ENSMUST00000119224 1464 ntTSL 2 BASIC11.02□□□□□ -0.65
Ebf1Q07802 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ebf1Q07802 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Ebf1Q07802 Snord17-201ENSMUST00000104526 238 ntBASIC11.02□□□□□ -0.65
Ebf1Q07802 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC11.02□□□□□ -0.65
Ebf1Q07802 Tprkb-204ENSMUST00000113752 749 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Ebf1Q07802 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ebf1Q07802 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Ebf1Q07802 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Ebf1Q07802 7420461P10Rik-201ENSMUST00000169439 781 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ebf1Q07802 Gm18733-202ENSMUST00000174447 401 ntBASIC11.02□□□□□ -0.65
Ebf1Q07802 Gm23647-201ENSMUST00000175042 109 ntBASIC11.02□□□□□ -0.65
Ebf1Q07802 Rn5s-201ENSMUST00000177555 119 ntBASIC11.02□□□□□ -0.65
Ebf1Q07802 n-R5s108-201ENSMUST00000177575 119 ntBASIC11.02□□□□□ -0.65
Ebf1Q07802 n-R5s121-201ENSMUST00000177589 119 ntBASIC11.02□□□□□ -0.65
Ebf1Q07802 n-R5s146-201ENSMUST00000177889 119 ntBASIC11.02□□□□□ -0.65
Ebf1Q07802 Gm22109-201ENSMUST00000177995 119 ntBASIC11.02□□□□□ -0.65
Ebf1Q07802 Gm22291-201ENSMUST00000178027 119 ntBASIC11.02□□□□□ -0.65
Ebf1Q07802 n-R5s141-201ENSMUST00000178066 119 ntBASIC11.02□□□□□ -0.65
Ebf1Q07802 Gm23284-201ENSMUST00000178069 119 ntBASIC11.02□□□□□ -0.65
Ebf1Q07802 n-R5s100-201ENSMUST00000178106 119 ntBASIC11.02□□□□□ -0.65
Ebf1Q07802 n-R5s111-201ENSMUST00000178203 119 ntBASIC11.02□□□□□ -0.65
Ebf1Q07802 n-R5s105-201ENSMUST00000178499 119 ntBASIC11.02□□□□□ -0.65
Ebf1Q07802 n-R5s149-201ENSMUST00000178520 119 ntBASIC11.02□□□□□ -0.65
Ebf1Q07802 n-R5s103-201ENSMUST00000178755 119 ntBASIC11.02□□□□□ -0.65
Ebf1Q07802 n-R5s123-201ENSMUST00000178804 119 ntBASIC11.02□□□□□ -0.65
Ebf1Q07802 n-R5s142-201ENSMUST00000178820 119 ntBASIC11.02□□□□□ -0.65
Ebf1Q07802 n-R5s144-201ENSMUST00000178859 119 ntBASIC11.02□□□□□ -0.65
Ebf1Q07802 n-R5s139-201ENSMUST00000178975 119 ntBASIC11.02□□□□□ -0.65
Ebf1Q07802 n-R5s134-201ENSMUST00000178983 119 ntBASIC11.02□□□□□ -0.65
Ebf1Q07802 n-R5s136-201ENSMUST00000179080 119 ntBASIC11.02□□□□□ -0.65
Ebf1Q07802 Gm25018-201ENSMUST00000179081 119 ntBASIC11.02□□□□□ -0.65
Ebf1Q07802 n-R5s104-201ENSMUST00000179107 119 ntBASIC11.02□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms