Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
SgcbP82349 Stx1b-201ENSMUST00000106267 4536 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SgcbP82349 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SgcbP82349 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
SgcbP82349 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
SgcbP82349 Gm37014-201ENSMUST00000194723 2253 ntBASIC9.76□□□□□ -0.85
SgcbP82349 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SgcbP82349 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
SgcbP82349 Adgra1-201ENSMUST00000026548 4758 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SgcbP82349 Unkl-202ENSMUST00000039734 4779 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
SgcbP82349 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
SgcbP82349 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC9.76□□□□□ -0.85
SgcbP82349 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
SgcbP82349 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
SgcbP82349 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
SgcbP82349 AW549877-201ENSMUST00000046633 5076 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SgcbP82349 A430105I19Rik-201ENSMUST00000059997 4703 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SgcbP82349 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC9.76□□□□□ -0.85
SgcbP82349 Gm8876-201ENSMUST00000120768 1122 ntBASIC9.76□□□□□ -0.85
SgcbP82349 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC9.76□□□□□ -0.85
SgcbP82349 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
SgcbP82349 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC9.76□□□□□ -0.85
SgcbP82349 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
SgcbP82349 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SgcbP82349 Gm37533-201ENSMUST00000193848 545 ntBASIC9.76□□□□□ -0.85
SgcbP82349 Gm5298-201ENSMUST00000201122 892 ntBASIC9.76□□□□□ -0.85
SgcbP82349 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
SgcbP82349 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
SgcbP82349 Gm18539-201ENSMUST00000204745 1090 ntBASIC9.76□□□□□ -0.85
SgcbP82349 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC9.76□□□□□ -0.85
SgcbP82349 AC154435.1-201ENSMUST00000223938 959 ntBASIC9.76□□□□□ -0.85
SgcbP82349 Ap3s1-202ENSMUST00000224622 978 ntBASIC9.76□□□□□ -0.85
SgcbP82349 AC099645.1-201ENSMUST00000226476 1105 ntBASIC9.76□□□□□ -0.85
SgcbP82349 AC134793.1-202ENSMUST00000227444 803 ntBASIC9.76□□□□□ -0.85
SgcbP82349 AC154589.2-201ENSMUST00000228847 251 ntBASIC9.76□□□□□ -0.85
SgcbP82349 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
SgcbP82349 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SgcbP82349 Nos1-206ENSMUST00000142742 10123 ntAPPRIS P2 TSL 5 BASIC9.76□□□□□ -0.85
SgcbP82349 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
SgcbP82349 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
SgcbP82349 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SgcbP82349 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
SgcbP82349 Tesk2-202ENSMUST00000106456 2430 ntTSL 5 BASIC9.76□□□□□ -0.85
SgcbP82349 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SgcbP82349 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
SgcbP82349 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
SgcbP82349 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SgcbP82349 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SgcbP82349 Aspm-201ENSMUST00000053364 9867 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SgcbP82349 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SgcbP82349 Ankrd11-201ENSMUST00000098333 7995 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
SgcbP82349 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SgcbP82349 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC9.75□□□□□ -0.85
SgcbP82349 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SgcbP82349 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
SgcbP82349 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
SgcbP82349 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SgcbP82349 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
SgcbP82349 Spata13-201ENSMUST00000022566 7517 ntAPPRIS P3 TSL 5 BASIC9.75□□□□□ -0.85
SgcbP82349 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
SgcbP82349 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
SgcbP82349 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SgcbP82349 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC9.75□□□□□ -0.85
SgcbP82349 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
SgcbP82349 Gm45206-201ENSMUST00000206885 2285 ntBASIC9.75□□□□□ -0.85
SgcbP82349 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
SgcbP82349 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
SgcbP82349 Lrrk1-201ENSMUST00000015277 7465 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SgcbP82349 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
SgcbP82349 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SgcbP82349 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
SgcbP82349 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC9.75□□□□□ -0.85
SgcbP82349 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
SgcbP82349 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC9.75□□□□□ -0.85
SgcbP82349 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC9.75□□□□□ -0.85
SgcbP82349 Gm13668-201ENSMUST00000119237 1001 ntBASIC9.75□□□□□ -0.85
SgcbP82349 Gm13487-201ENSMUST00000122240 864 ntBASIC9.75□□□□□ -0.85
SgcbP82349 Mir1905-201ENSMUST00000122779 82 ntBASIC9.75□□□□□ -0.85
SgcbP82349 Gm6938-201ENSMUST00000123014 771 ntTSL 3 BASIC9.75□□□□□ -0.85
SgcbP82349 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
SgcbP82349 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC9.75□□□□□ -0.85
SgcbP82349 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
SgcbP82349 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC9.75□□□□□ -0.85
SgcbP82349 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC9.75□□□□□ -0.85
SgcbP82349 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC9.75□□□□□ -0.85
SgcbP82349 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
SgcbP82349 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
SgcbP82349 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
SgcbP82349 Gm17798-201ENSMUST00000182282 1035 ntBASIC9.75□□□□□ -0.85
SgcbP82349 Gm19013-201ENSMUST00000183895 1222 ntBASIC9.75□□□□□ -0.85
SgcbP82349 Gm19014-201ENSMUST00000184828 1189 ntBASIC9.75□□□□□ -0.85
SgcbP82349 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC9.75□□□□□ -0.85
SgcbP82349 Gm43244-201ENSMUST00000196994 1285 ntBASIC9.75□□□□□ -0.85
SgcbP82349 Gm43997-201ENSMUST00000203986 1005 ntBASIC9.75□□□□□ -0.85
SgcbP82349 Gm19091-201ENSMUST00000208120 978 ntBASIC9.75□□□□□ -0.85
SgcbP82349 Gm45120-201ENSMUST00000208880 408 ntBASIC9.75□□□□□ -0.85
SgcbP82349 Gm7082-201ENSMUST00000209880 969 ntBASIC9.75□□□□□ -0.85
SgcbP82349 AC120394.2-201ENSMUST00000213905 702 ntTSL 5 BASIC9.75□□□□□ -0.85
SgcbP82349 AC153899.1-201ENSMUST00000214092 1117 ntBASIC9.75□□□□□ -0.85
SgcbP82349 Gm8255-201ENSMUST00000218693 305 ntBASIC9.75□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms