Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC11.98□□□□□ -0.49
Hmgb1P63158 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hmgb1P63158 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Hmgb1P63158 Smpd4-219ENSMUST00000170366 2256 ntTSL 5 BASIC11.98□□□□□ -0.49
Hmgb1P63158 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Hmgb1P63158 AC156802.2-203ENSMUST00000226032 1906 ntBASIC11.98□□□□□ -0.49
Hmgb1P63158 Myc-206ENSMUST00000167731 1821 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Hmgb1P63158 4931423N10Rik-201ENSMUST00000028113 1842 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hmgb1P63158 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Hmgb1P63158 Slco5a1-202ENSMUST00000115403 8509 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Hmgb1P63158 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Hmgb1P63158 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hmgb1P63158 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hmgb1P63158 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hmgb1P63158 Gm25076-201ENSMUST00000104098 132 ntBASIC11.98□□□□□ -0.49
Hmgb1P63158 Gm16166-201ENSMUST00000118291 787 ntBASIC11.98□□□□□ -0.49
Hmgb1P63158 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Hmgb1P63158 Gm13284-201ENSMUST00000121020 547 ntBASIC11.98□□□□□ -0.49
Hmgb1P63158 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Hmgb1P63158 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC11.98□□□□□ -0.49
Hmgb1P63158 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC11.98□□□□□ -0.49
Hmgb1P63158 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC11.98□□□□□ -0.49
Hmgb1P63158 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC11.98□□□□□ -0.49
Hmgb1P63158 AC154257.1-202ENSMUST00000224729 843 ntBASIC11.98□□□□□ -0.49
Hmgb1P63158 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hmgb1P63158 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hmgb1P63158 Dkk2-201ENSMUST00000029665 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hmgb1P63158 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hmgb1P63158 Ikbkb-201ENSMUST00000033939 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hmgb1P63158 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hmgb1P63158 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Hmgb1P63158 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Hmgb1P63158 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Hmgb1P63158 Bloc1s5-201ENSMUST00000035899 5634 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hmgb1P63158 AC090962.2-201ENSMUST00000225064 1801 ntBASIC11.97□□□□□ -0.49
Hmgb1P63158 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Hmgb1P63158 Carhsp1-201ENSMUST00000008537 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hmgb1P63158 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Hmgb1P63158 Odf2l-202ENSMUST00000098538 2564 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Hmgb1P63158 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hmgb1P63158 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Hmgb1P63158 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Hmgb1P63158 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC11.97□□□□□ -0.49
Hmgb1P63158 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC11.97□□□□□ -0.49
Hmgb1P63158 Nfkbiz-201ENSMUST00000036273 4115 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hmgb1P63158 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC11.97□□□□□ -0.49
Hmgb1P63158 AC160562.2-201ENSMUST00000216374 2201 ntTSL 2 BASIC11.97□□□□□ -0.49
Hmgb1P63158 C330027C09Rik-201ENSMUST00000048374 3974 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hmgb1P63158 Gm9387-201ENSMUST00000098624 1320 ntBASIC11.97□□□□□ -0.49
Hmgb1P63158 AC129336.2-201ENSMUST00000218053 3086 ntBASIC11.97□□□□□ -0.49
Hmgb1P63158 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hmgb1P63158 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Hmgb1P63158 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Hmgb1P63158 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Hmgb1P63158 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Hmgb1P63158 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
Hmgb1P63158 Gm14585-201ENSMUST00000120713 634 ntBASIC11.97□□□□□ -0.49
Hmgb1P63158 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC11.97□□□□□ -0.49
Hmgb1P63158 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Hmgb1P63158 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Hmgb1P63158 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC11.97□□□□□ -0.49
Hmgb1P63158 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Hmgb1P63158 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Hmgb1P63158 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC11.97□□□□□ -0.49
Hmgb1P63158 Gm5865-201ENSMUST00000198713 637 ntBASIC11.97□□□□□ -0.49
Hmgb1P63158 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC11.97□□□□□ -0.49
Hmgb1P63158 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC11.97□□□□□ -0.49
Hmgb1P63158 AC129975.1-201ENSMUST00000224816 592 ntBASIC11.97□□□□□ -0.49
Hmgb1P63158 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hmgb1P63158 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC11.97□□□□□ -0.49
Hmgb1P63158 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Hmgb1P63158 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC11.97□□□□□ -0.49
Hmgb1P63158 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hmgb1P63158 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hmgb1P63158 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Hmgb1P63158 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Hmgb1P63158 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hmgb1P63158 Gm19327-201ENSMUST00000220651 3271 ntBASIC11.97□□□□□ -0.49
Hmgb1P63158 Ddx3x-201ENSMUST00000000804 4692 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hmgb1P63158 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hmgb1P63158 Msh3-202ENSMUST00000185852 3946 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hmgb1P63158 Dysf-202ENSMUST00000089595 6613 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Hmgb1P63158 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Hmgb1P63158 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Hmgb1P63158 Gm10643-201ENSMUST00000098592 1577 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Hmgb1P63158 Nphs1-203ENSMUST00000126297 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hmgb1P63158 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Hmgb1P63158 Zfp672-203ENSMUST00000065533 2619 ntBASIC11.96□□□□□ -0.49
Hmgb1P63158 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hmgb1P63158 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
Hmgb1P63158 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hmgb1P63158 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC11.96□□□□□ -0.49
Hmgb1P63158 2500004C02Rik-202ENSMUST00000128026 1898 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Hmgb1P63158 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Hmgb1P63158 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Hmgb1P63158 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC11.96□□□□□ -0.49
Hmgb1P63158 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Hmgb1P63158 Mir5120-201ENSMUST00000175020 78 ntBASIC11.96□□□□□ -0.49
Hmgb1P63158 Gm37458-201ENSMUST00000194055 410 ntBASIC11.96□□□□□ -0.49
Hmgb1P63158 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms