Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Gm10807-201ENSMUST00000177134 795 ntBASIC9.73□□□□□ -0.85
Lsm3P62311 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Lsm3P62311 Gm8343-201ENSMUST00000182705 994 ntBASIC9.73□□□□□ -0.85
Lsm3P62311 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC9.73□□□□□ -0.85
Lsm3P62311 Ighv4-2-201ENSMUST00000192975 362 ntBASIC9.73□□□□□ -0.85
Lsm3P62311 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Lsm3P62311 Gm43133-201ENSMUST00000197472 463 ntBASIC9.73□□□□□ -0.85
Lsm3P62311 Gm44420-201ENSMUST00000203669 490 ntBASIC9.73□□□□□ -0.85
Lsm3P62311 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Lsm3P62311 Gm5996-201ENSMUST00000211110 718 ntBASIC9.73□□□□□ -0.85
Lsm3P62311 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC9.73□□□□□ -0.85
Lsm3P62311 AC140406.1-201ENSMUST00000226481 465 ntBASIC9.73□□□□□ -0.85
Lsm3P62311 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Lsm3P62311 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC9.73□□□□□ -0.85
Lsm3P62311 Plscr2-205ENSMUST00000180154 1900 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Lsm3P62311 Cpsf1-201ENSMUST00000071898 4515 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Lsm3P62311 Gm53-204ENSMUST00000150490 3257 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Lsm3P62311 D3Ertd751e-201ENSMUST00000026867 1989 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Lsm3P62311 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Lsm3P62311 Mthfd1-206ENSMUST00000220046 3040 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Lsm3P62311 Uhrf1-204ENSMUST00000113039 3391 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Lsm3P62311 Tdp1-207ENSMUST00000153627 2036 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Lsm3P62311 Htr2c-201ENSMUST00000036303 4747 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Lsm3P62311 Cyp4a12b-201ENSMUST00000094887 2395 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Lsm3P62311 Pex5l-204ENSMUST00000108224 2721 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Lsm3P62311 Rangap1-203ENSMUST00000171115 2740 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Lsm3P62311 Tenm2-202ENSMUST00000102801 9908 ntAPPRIS P2 TSL 5 BASIC9.73□□□□□ -0.85
Lsm3P62311 Pantr1-208ENSMUST00000181660 2085 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Lsm3P62311 Htr3b-201ENSMUST00000008734 2411 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Lsm3P62311 Wdr78-202ENSMUST00000036557 3479 ntTSL 5 BASIC9.73□□□□□ -0.85
Lsm3P62311 Pdpr-201ENSMUST00000039333 4938 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Lsm3P62311 Zfp264-202ENSMUST00000208781 2801 ntTSL 5 BASIC9.73□□□□□ -0.85
Lsm3P62311 Ispd-206ENSMUST00000223068 2808 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Lsm3P62311 Scmh1-202ENSMUST00000064991 2548 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Lsm3P62311 Cacna1d-207ENSMUST00000224198 6564 ntAPPRIS ALT2 BASIC9.72□□□□□ -0.85
Lsm3P62311 Adar-203ENSMUST00000107405 5871 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Lsm3P62311 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC9.72□□□□□ -0.85
Lsm3P62311 Zadh2-201ENSMUST00000060223 3321 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Lsm3P62311 Tial1-202ENSMUST00000106226 4451 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Lsm3P62311 Erc2-201ENSMUST00000090302 6083 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Lsm3P62311 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Lsm3P62311 Gpr156-201ENSMUST00000061274 4581 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Lsm3P62311 Baat-201ENSMUST00000043056 1941 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Lsm3P62311 CT009601.1-201ENSMUST00000225567 2705 ntBASIC9.72□□□□□ -0.85
Lsm3P62311 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Lsm3P62311 Stx8-201ENSMUST00000021285 4394 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Lsm3P62311 Edil3-201ENSMUST00000043111 5156 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Lsm3P62311 Oprm1-213ENSMUST00000105604 1616 ntAPPRIS ALT1 TSL 5 BASIC9.72□□□□□ -0.85
Lsm3P62311 Gm9978-201ENSMUST00000069431 3273 ntBASIC9.72□□□□□ -0.85
Lsm3P62311 Gpr75-201ENSMUST00000109430 2926 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Lsm3P62311 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Lsm3P62311 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Lsm3P62311 Sfxn5-204ENSMUST00000113788 514 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Lsm3P62311 Gm12247-201ENSMUST00000117585 670 ntBASIC9.72□□□□□ -0.85
Lsm3P62311 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC9.72□□□□□ -0.85
Lsm3P62311 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC9.72□□□□□ -0.85
Lsm3P62311 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC9.72□□□□□ -0.85
Lsm3P62311 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC9.72□□□□□ -0.85
Lsm3P62311 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Lsm3P62311 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC9.72□□□□□ -0.85
Lsm3P62311 Gm27953-201ENSMUST00000185171 143 ntBASIC9.72□□□□□ -0.85
Lsm3P62311 Gm28624-201ENSMUST00000186430 2131 ntBASIC9.72□□□□□ -0.85
Lsm3P62311 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC9.72□□□□□ -0.85
Lsm3P62311 Gm17827-201ENSMUST00000211825 742 ntBASIC9.72□□□□□ -0.85
Lsm3P62311 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC9.72□□□□□ -0.85
Lsm3P62311 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Lsm3P62311 Gm17823-201ENSMUST00000217830 1006 ntBASIC9.72□□□□□ -0.85
Lsm3P62311 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Lsm3P62311 CT485787.1-201ENSMUST00000225617 968 ntBASIC9.72□□□□□ -0.85
Lsm3P62311 AC126253.1-201ENSMUST00000227974 824 ntBASIC9.72□□□□□ -0.85
Lsm3P62311 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Lsm3P62311 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Lsm3P62311 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Lsm3P62311 Il1f5-206ENSMUST00000168941 1722 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Lsm3P62311 Arhgap32-206ENSMUST00000182802 5621 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Lsm3P62311 Zfp462-201ENSMUST00000030131 4823 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Lsm3P62311 Ilf3-201ENSMUST00000067646 3549 ntAPPRIS P4 TSL 1 (best) BASIC9.72□□□□□ -0.85
Lsm3P62311 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC9.72□□□□□ -0.85
Lsm3P62311 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Lsm3P62311 Gm43636-201ENSMUST00000201501 2235 ntBASIC9.72□□□□□ -0.85
Lsm3P62311 Kcne4-201ENSMUST00000057262 2657 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Lsm3P62311 Eif2s3y-201ENSMUST00000091197 1836 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Lsm3P62311 Sema3e-201ENSMUST00000073957 6861 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Lsm3P62311 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Lsm3P62311 Cd300a-202ENSMUST00000106582 4645 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Lsm3P62311 Sms-201ENSMUST00000112529 3717 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Lsm3P62311 Mfsd11-201ENSMUST00000021173 3298 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Lsm3P62311 Adamts4-201ENSMUST00000111314 3761 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Lsm3P62311 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Lsm3P62311 Gm26772-201ENSMUST00000180466 3429 ntTSL 5 BASIC9.72□□□□□ -0.85
Lsm3P62311 Myo7a-202ENSMUST00000107122 6867 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Lsm3P62311 Mkrn1-204ENSMUST00000114823 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Lsm3P62311 Slc2a4rg-ps-201ENSMUST00000127559 2976 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Lsm3P62311 4933425M03Rik-201ENSMUST00000195991 1544 ntBASIC9.72□□□□□ -0.85
Lsm3P62311 Gm19410-201ENSMUST00000207505 6352 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
Lsm3P62311 Tgm7-201ENSMUST00000110675 2151 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
Lsm3P62311 Gabra5-203ENSMUST00000206734 2224 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Lsm3P62311 AC117656.2-201ENSMUST00000224931 2215 ntBASIC9.71□□□□□ -0.85
Lsm3P62311 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC9.71□□□□□ -0.85
Lsm3P62311 Tln2-207ENSMUST00000215784 8330 ntAPPRIS ALT1 TSL 5 BASIC9.71□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms