Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 Sfxn5-204ENSMUST00000113788 514 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Cd28P31041 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC9.46□□□□□ -0.9
Cd28P31041 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC9.46□□□□□ -0.9
Cd28P31041 Gm11244-201ENSMUST00000121243 237 ntBASIC9.46□□□□□ -0.9
Cd28P31041 Gm13660-201ENSMUST00000142828 722 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Cd28P31041 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Cd28P31041 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Cd28P31041 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC9.46□□□□□ -0.9
Cd28P31041 Gm27320-201ENSMUST00000184892 109 ntBASIC9.46□□□□□ -0.9
Cd28P31041 Ighv1-62-201ENSMUST00000193406 350 ntBASIC9.46□□□□□ -0.9
Cd28P31041 Gm43822-201ENSMUST00000200285 476 ntBASIC9.46□□□□□ -0.9
Cd28P31041 Gm44506-201ENSMUST00000206278 965 ntBASIC9.46□□□□□ -0.9
Cd28P31041 Gm18042-201ENSMUST00000219887 790 ntBASIC9.46□□□□□ -0.9
Cd28P31041 CT573047.1-201ENSMUST00000223652 851 ntBASIC9.46□□□□□ -0.9
Cd28P31041 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cd28P31041 Tctex1d1-201ENSMUST00000030248 977 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cd28P31041 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cd28P31041 Pvalb-201ENSMUST00000005860 977 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cd28P31041 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Cd28P31041 Gm37697-201ENSMUST00000195680 1844 ntBASIC9.46□□□□□ -0.9
Cd28P31041 Gcc1-201ENSMUST00000064377 2859 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cd28P31041 Galnt16-201ENSMUST00000021558 3922 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cd28P31041 Meox2-201ENSMUST00000041183 2360 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cd28P31041 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cd28P31041 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC9.46□□□□□ -0.9
Cd28P31041 Gfra2-203ENSMUST00000227697 1323 ntBASIC9.46□□□□□ -0.9
Cd28P31041 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cd28P31041 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cd28P31041 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Cd28P31041 Syne1-201ENSMUST00000041639 6990 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Cd28P31041 Nfya-202ENSMUST00000078800 3653 ntAPPRIS ALT1 TSL 5 BASIC9.46□□□□□ -0.9
Cd28P31041 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Cd28P31041 Lrrn4cl-201ENSMUST00000096257 2583 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cd28P31041 Arid5a-202ENSMUST00000115029 4329 ntTSL 3 BASIC9.46□□□□□ -0.9
Cd28P31041 Fam122b-201ENSMUST00000071023 4334 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cd28P31041 Gm6092-201ENSMUST00000121659 2029 ntBASIC9.46□□□□□ -0.9
Cd28P31041 Gm16982-201ENSMUST00000181275 2620 ntTSL 2 BASIC9.46□□□□□ -0.9
Cd28P31041 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cd28P31041 Tchhl1-201ENSMUST00000029516 2066 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cd28P31041 Ehmt1-205ENSMUST00000114432 4539 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Cd28P31041 4930432K21Rik-201ENSMUST00000093375 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Cd28P31041 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Cd28P31041 Ncmap-203ENSMUST00000105858 1616 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cd28P31041 E2f7-204ENSMUST00000173471 3567 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cd28P31041 Gm38025-201ENSMUST00000193926 2308 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Cd28P31041 Adgre5-202ENSMUST00000075843 3000 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cd28P31041 Rnf123-207ENSMUST00000160249 4426 ntAPPRIS P3 TSL 5 BASIC9.45□□□□□ -0.9
Cd28P31041 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Cd28P31041 Gm7598-201ENSMUST00000130251 3123 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Cd28P31041 Tia1-201ENSMUST00000095752 3130 ntAPPRIS ALT1 TSL 5 BASIC9.45□□□□□ -0.9
Cd28P31041 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Cd28P31041 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cd28P31041 Napepld-202ENSMUST00000115217 3954 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cd28P31041 Pms2-209ENSMUST00000148011 5482 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cd28P31041 Gm32219-201ENSMUST00000221234 1819 ntTSL 5 BASIC9.45□□□□□ -0.9
Cd28P31041 Gtf2i-223ENSMUST00000174513 4021 ntAPPRIS ALT2 TSL 2 BASIC9.45□□□□□ -0.9
Cd28P31041 Snd1-201ENSMUST00000001460 3482 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cd28P31041 Gm16478-201ENSMUST00000208113 5084 ntBASIC9.45□□□□□ -0.9
Cd28P31041 Zfp317-205ENSMUST00000215372 2809 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cd28P31041 Lrrc61-202ENSMUST00000114545 2913 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cd28P31041 Stau2-202ENSMUST00000054668 2907 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Cd28P31041 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC9.45□□□□□ -0.9
Cd28P31041 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cd28P31041 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cd28P31041 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Cd28P31041 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC9.45□□□□□ -0.9
Cd28P31041 Gm17058-201ENSMUST00000168951 928 ntTSL 5 BASIC9.45□□□□□ -0.9
Cd28P31041 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC9.45□□□□□ -0.9
Cd28P31041 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC9.45□□□□□ -0.9
Cd28P31041 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Cd28P31041 Mir7085-201ENSMUST00000184353 66 ntBASIC9.45□□□□□ -0.9
Cd28P31041 Gm19412-201ENSMUST00000185388 436 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Cd28P31041 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Cd28P31041 Gm37852-201ENSMUST00000193027 350 ntBASIC9.45□□□□□ -0.9
Cd28P31041 Nme6-206ENSMUST00000197627 905 ntTSL 3 BASIC9.45□□□□□ -0.9
Cd28P31041 Gm42682-201ENSMUST00000198349 1265 ntBASIC9.45□□□□□ -0.9
Cd28P31041 Gm5865-201ENSMUST00000198713 637 ntBASIC9.45□□□□□ -0.9
Cd28P31041 Gm8574-201ENSMUST00000203207 924 ntBASIC9.45□□□□□ -0.9
Cd28P31041 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC9.45□□□□□ -0.9
Cd28P31041 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC9.45□□□□□ -0.9
Cd28P31041 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cd28P31041 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cd28P31041 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Cd28P31041 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC9.45□□□□□ -0.9
Cd28P31041 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Cd28P31041 Gm9785-201ENSMUST00000062642 1006 ntBASIC9.45□□□□□ -0.9
Cd28P31041 Gm10020-201ENSMUST00000081993 612 ntBASIC9.45□□□□□ -0.9
Cd28P31041 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC9.45□□□□□ -0.9
Cd28P31041 Abcb8-203ENSMUST00000115077 3074 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Cd28P31041 AC153370.2-201ENSMUST00000217920 3093 ntTSL 5 BASIC9.45□□□□□ -0.9
Cd28P31041 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Cd28P31041 Gm38344-201ENSMUST00000195306 1353 ntBASIC9.45□□□□□ -0.9
Cd28P31041 Gm7993-201ENSMUST00000200970 1384 ntBASIC9.45□□□□□ -0.9
Cd28P31041 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Cd28P31041 Lhfpl2-201ENSMUST00000054274 4348 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cd28P31041 Osgep-202ENSMUST00000159292 3388 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cd28P31041 Ccdc33-204ENSMUST00000119665 2552 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cd28P31041 Zfp7-201ENSMUST00000023179 2769 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Cd28P31041 Adat1-202ENSMUST00000120457 1677 ntTSL 5 BASIC9.45□□□□□ -0.9
Cd28P31041 4631405J19Rik-202ENSMUST00000111270 2909 ntTSL 2 BASIC9.45□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms