Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm45592-201ENSMUST00000209605 1043 ntBASIC11.81□□□□□ -0.52
Chmp6P0C0A3 Gm7183-201ENSMUST00000213870 1005 ntBASIC11.81□□□□□ -0.52
Chmp6P0C0A3 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC11.81□□□□□ -0.52
Chmp6P0C0A3 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Chmp6P0C0A3 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp6P0C0A3 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp6P0C0A3 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp6P0C0A3 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC11.81□□□□□ -0.52
Chmp6P0C0A3 Gm5124-202ENSMUST00000132683 2083 ntBASIC11.81□□□□□ -0.52
Chmp6P0C0A3 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp6P0C0A3 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp6P0C0A3 Pck2-201ENSMUST00000048781 3400 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp6P0C0A3 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp6P0C0A3 Atad5-201ENSMUST00000017694 7272 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp6P0C0A3 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC11.81□□□□□ -0.52
Chmp6P0C0A3 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Chmp6P0C0A3 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp6P0C0A3 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp6P0C0A3 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp6P0C0A3 AC122273.1-201ENSMUST00000213634 2327 ntBASIC11.81□□□□□ -0.52
Chmp6P0C0A3 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Chmp6P0C0A3 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Chmp6P0C0A3 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp6P0C0A3 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp6P0C0A3 Pex26-203ENSMUST00000120066 3861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Chmp6P0C0A3 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp6P0C0A3 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp6P0C0A3 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Chmp6P0C0A3 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp6P0C0A3 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp6P0C0A3 Sez6l-205ENSMUST00000212480 5857 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Chmp6P0C0A3 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp6P0C0A3 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp6P0C0A3 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Chmp6P0C0A3 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC11.8□□□□□ -0.52
Chmp6P0C0A3 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp6P0C0A3 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC11.8□□□□□ -0.52
Chmp6P0C0A3 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC11.8□□□□□ -0.52
Chmp6P0C0A3 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC11.8□□□□□ -0.52
Chmp6P0C0A3 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp6P0C0A3 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Chmp6P0C0A3 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC11.8□□□□□ -0.52
Chmp6P0C0A3 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp6P0C0A3 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC11.8□□□□□ -0.52
Chmp6P0C0A3 Gm7600-201ENSMUST00000209657 785 ntBASIC11.8□□□□□ -0.52
Chmp6P0C0A3 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC11.8□□□□□ -0.52
Chmp6P0C0A3 AC134248.1-201ENSMUST00000216113 1176 ntBASIC11.8□□□□□ -0.52
Chmp6P0C0A3 AC153152.3-201ENSMUST00000222188 1135 ntBASIC11.8□□□□□ -0.52
Chmp6P0C0A3 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp6P0C0A3 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp6P0C0A3 Gm12799-201ENSMUST00000118151 2560 ntBASIC11.8□□□□□ -0.52
Chmp6P0C0A3 Pnma2-201ENSMUST00000089236 5518 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp6P0C0A3 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp6P0C0A3 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp6P0C0A3 Gm18798-201ENSMUST00000187264 1700 ntBASIC11.8□□□□□ -0.52
Chmp6P0C0A3 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC11.8□□□□□ -0.52
Chmp6P0C0A3 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp6P0C0A3 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Chmp6P0C0A3 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Chmp6P0C0A3 Sall2-201ENSMUST00000058326 5147 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp6P0C0A3 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp6P0C0A3 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp6P0C0A3 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp6P0C0A3 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp6P0C0A3 Tom1l2-203ENSMUST00000093048 4864 ntTSL 5 BASIC11.79□□□□□ -0.52
Chmp6P0C0A3 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp6P0C0A3 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp6P0C0A3 Ccdc93-201ENSMUST00000036025 7274 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp6P0C0A3 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Chmp6P0C0A3 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp6P0C0A3 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp6P0C0A3 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Chmp6P0C0A3 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp6P0C0A3 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC11.79□□□□□ -0.52
Chmp6P0C0A3 AW549877-201ENSMUST00000046633 5076 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp6P0C0A3 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Chmp6P0C0A3 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Chmp6P0C0A3 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Chmp6P0C0A3 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC11.79□□□□□ -0.52
Chmp6P0C0A3 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC11.79□□□□□ -0.52
Chmp6P0C0A3 Mir1901-201ENSMUST00000122616 78 ntBASIC11.79□□□□□ -0.52
Chmp6P0C0A3 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC11.79□□□□□ -0.52
Chmp6P0C0A3 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC11.79□□□□□ -0.52
Chmp6P0C0A3 Gm22442-201ENSMUST00000157256 144 ntBASIC11.79□□□□□ -0.52
Chmp6P0C0A3 Gm4982-201ENSMUST00000160440 1098 ntBASIC11.79□□□□□ -0.52
Chmp6P0C0A3 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Chmp6P0C0A3 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp6P0C0A3 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
Chmp6P0C0A3 Gm23153-201ENSMUST00000175323 313 ntBASIC11.79□□□□□ -0.52
Chmp6P0C0A3 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Chmp6P0C0A3 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Chmp6P0C0A3 Gm37028-201ENSMUST00000194276 107 ntBASIC11.79□□□□□ -0.52
Chmp6P0C0A3 Gm43667-201ENSMUST00000198616 1095 ntBASIC11.79□□□□□ -0.52
Chmp6P0C0A3 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC11.79□□□□□ -0.52
Chmp6P0C0A3 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC11.79□□□□□ -0.52
Chmp6P0C0A3 Gm45410-201ENSMUST00000211331 1093 ntBASIC11.79□□□□□ -0.52
Chmp6P0C0A3 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Chmp6P0C0A3 Gm9111-201ENSMUST00000219394 709 ntBASIC11.79□□□□□ -0.52
Chmp6P0C0A3 Id2-203ENSMUST00000222667 958 ntBASIC11.79□□□□□ -0.52
Chmp6P0C0A3 AC154589.2-201ENSMUST00000228847 251 ntBASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms