Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Tec-201ENSMUST00000071944 2659 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
P04224 Gm24255-201ENSMUST00000104481 128 ntBASIC9.48□□□□□ -0.89
P04224 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC9.48□□□□□ -0.89
P04224 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC9.48□□□□□ -0.89
P04224 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC9.48□□□□□ -0.89
P04224 Gm7150-201ENSMUST00000122032 981 ntBASIC9.48□□□□□ -0.89
P04224 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC9.48□□□□□ -0.89
P04224 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
P04224 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC9.48□□□□□ -0.89
P04224 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
P04224 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC9.48□□□□□ -0.89
P04224 Gm5852-201ENSMUST00000194119 1021 ntBASIC9.48□□□□□ -0.89
P04224 Gm18038-201ENSMUST00000197900 485 ntBASIC9.48□□□□□ -0.89
P04224 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC9.48□□□□□ -0.89
P04224 Gm7118-201ENSMUST00000200167 1003 ntBASIC9.48□□□□□ -0.89
P04224 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC9.48□□□□□ -0.89
P04224 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
P04224 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
P04224 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
P04224 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
P04224 Arxes1-201ENSMUST00000057625 1580 ntAPPRIS P1 BASIC9.48□□□□□ -0.89
P04224 Ppp1r3c-201ENSMUST00000087321 2719 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
P04224 Zbtb8b-202ENSMUST00000106046 3323 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
P04224 Prkag2-201ENSMUST00000030784 3331 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
P04224 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
P04224 Gm9860-201ENSMUST00000211426 3653 ntBASIC9.48□□□□□ -0.89
P04224 Crry-ps-201ENSMUST00000079090 1309 ntBASIC9.48□□□□□ -0.89
P04224 BC024978-201ENSMUST00000108379 7247 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
P04224 Cgnl1-201ENSMUST00000072899 6754 ntAPPRIS P2 TSL 5 BASIC9.48□□□□□ -0.89
P04224 Gm9129-201ENSMUST00000218173 1689 ntBASIC9.48□□□□□ -0.89
P04224 Ywhag-201ENSMUST00000055808 3520 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
P04224 Gpr68-202ENSMUST00000110065 2900 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
P04224 Kcnmb1-201ENSMUST00000020362 4191 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
P04224 Mtfr1-204ENSMUST00000130645 2953 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
P04224 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
P04224 Gm37582-201ENSMUST00000192953 1409 ntBASIC9.48□□□□□ -0.89
P04224 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
P04224 Acmsd-201ENSMUST00000038006 2717 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
P04224 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
P04224 AC124732.3-201ENSMUST00000221835 1765 ntBASIC9.47□□□□□ -0.89
P04224 Metap1-203ENSMUST00000197531 3708 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
P04224 Ctnnd1-217ENSMUST00000111691 5380 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
P04224 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
P04224 Slc18a2-201ENSMUST00000026084 3803 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
P04224 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
P04224 Il16-201ENSMUST00000001792 5260 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
P04224 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
P04224 Mtor-202ENSMUST00000103221 8564 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
P04224 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC9.47□□□□□ -0.89
P04224 Tbc1d31-201ENSMUST00000022992 3311 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
P04224 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
P04224 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
P04224 Traf1-207ENSMUST00000172159 3436 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
P04224 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
P04224 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
P04224 Tmem150c-201ENSMUST00000063192 3084 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
P04224 Myo16-202ENSMUST00000207204 6719 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
P04224 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC9.47□□□□□ -0.89
P04224 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC9.47□□□□□ -0.89
P04224 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
P04224 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC9.47□□□□□ -0.89
P04224 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC9.47□□□□□ -0.89
P04224 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC9.47□□□□□ -0.89
P04224 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
P04224 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC9.47□□□□□ -0.89
P04224 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC9.47□□□□□ -0.89
P04224 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
P04224 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC9.47□□□□□ -0.89
P04224 Gm3332-201ENSMUST00000189337 928 ntBASIC9.47□□□□□ -0.89
P04224 Gm43822-201ENSMUST00000200285 476 ntBASIC9.47□□□□□ -0.89
P04224 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC9.47□□□□□ -0.89
P04224 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC9.47□□□□□ -0.89
P04224 Gm8913-201ENSMUST00000209491 641 ntBASIC9.47□□□□□ -0.89
P04224 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
P04224 Gm6722-201ENSMUST00000221586 390 ntBASIC9.47□□□□□ -0.89
P04224 Gm270-201ENSMUST00000223010 976 ntBASIC9.47□□□□□ -0.89
P04224 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
P04224 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
P04224 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
P04224 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
P04224 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC9.47□□□□□ -0.89
P04224 Slc35c1-201ENSMUST00000067631 3139 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
P04224 Scn2b-202ENSMUST00000170998 4656 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
P04224 Stx16-201ENSMUST00000044638 3731 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
P04224 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
P04224 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
P04224 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
P04224 Lama1-201ENSMUST00000035471 9518 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
P04224 AC155245.1-201ENSMUST00000222266 1804 ntBASIC9.47□□□□□ -0.89
P04224 Lrtm1-203ENSMUST00000224760 3060 ntBASIC9.47□□□□□ -0.89
P04224 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
P04224 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
P04224 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
P04224 Nup214-201ENSMUST00000065398 6605 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
P04224 Park2-209ENSMUST00000191124 3202 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
P04224 Gal3st2-201ENSMUST00000094663 2844 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
P04224 Rora-201ENSMUST00000034766 10878 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
P04224 Hdac7-208ENSMUST00000121514 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
P04224 Gm37048-201ENSMUST00000194827 5578 ntBASIC9.46□□□□□ -0.89
P04224 Gad1-201ENSMUST00000094934 3355 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms