Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Ccdc180J3QNE4 Morf4l2-215ENSMUST00000169418 1782 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Ccdc180J3QNE4 AC124732.3-201ENSMUST00000221835 1765 ntBASIC19.49■□□□□ 0.71
Ccdc180J3QNE4 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc180J3QNE4 Rptoros-201ENSMUST00000127450 1174 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc180J3QNE4 Gm23521-201ENSMUST00000177845 110 ntBASIC19.49■□□□□ 0.71
Ccdc180J3QNE4 Gm17797-201ENSMUST00000182175 997 ntBASIC19.49■□□□□ 0.71
Ccdc180J3QNE4 Gm3945-201ENSMUST00000196637 683 ntBASIC19.49■□□□□ 0.71
Ccdc180J3QNE4 9230114K14Rik-202ENSMUST00000198720 837 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc180J3QNE4 AC127583.1-201ENSMUST00000224351 540 ntBASIC19.49■□□□□ 0.71
Ccdc180J3QNE4 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc180J3QNE4 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Ccdc180J3QNE4 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Ccdc180J3QNE4 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ccdc180J3QNE4 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc180J3QNE4 Iyd-201ENSMUST00000019896 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc180J3QNE4 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc180J3QNE4 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc180J3QNE4 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc180J3QNE4 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc180J3QNE4 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc180J3QNE4 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc180J3QNE4 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc180J3QNE4 Gm43522-201ENSMUST00000196697 1922 ntBASIC19.48■□□□□ 0.71
Ccdc180J3QNE4 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc180J3QNE4 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc180J3QNE4 Gm37324-201ENSMUST00000194500 4504 ntBASIC19.48■□□□□ 0.71
Ccdc180J3QNE4 Gm24161-201ENSMUST00000104592 130 ntBASIC19.48■□□□□ 0.71
Ccdc180J3QNE4 Nptn-202ENSMUST00000114121 863 ntTSL 5 BASIC19.48■□□□□ 0.71
Ccdc180J3QNE4 Olfr1060-ps1-201ENSMUST00000118335 943 ntBASIC19.48■□□□□ 0.71
Ccdc180J3QNE4 Gm8864-201ENSMUST00000118653 1010 ntBASIC19.48■□□□□ 0.71
Ccdc180J3QNE4 Gm8809-201ENSMUST00000119367 743 ntBASIC19.48■□□□□ 0.71
Ccdc180J3QNE4 Gm22388-201ENSMUST00000158194 248 ntBASIC19.48■□□□□ 0.71
Ccdc180J3QNE4 Gm1758-201ENSMUST00000164528 606 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Ccdc180J3QNE4 Gm17514-201ENSMUST00000181863 1102 ntTSL 5 BASIC19.48■□□□□ 0.71
Ccdc180J3QNE4 Gm4866-201ENSMUST00000197408 589 ntBASIC19.48■□□□□ 0.71
Ccdc180J3QNE4 CT030011.1-201ENSMUST00000221959 264 ntTSL 5 BASIC19.48■□□□□ 0.71
Ccdc180J3QNE4 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC19.48■□□□□ 0.71
Ccdc180J3QNE4 Gm38292-201ENSMUST00000192646 3045 ntBASIC19.48■□□□□ 0.71
Ccdc180J3QNE4 Elmod3-202ENSMUST00000114069 2164 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc180J3QNE4 Elf2-213ENSMUST00000195432 2161 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc180J3QNE4 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc180J3QNE4 Cd74-203ENSMUST00000167610 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ccdc180J3QNE4 Ppp6c-205ENSMUST00000204701 1495 ntTSL 5 BASIC19.48■□□□□ 0.71
Ccdc180J3QNE4 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc180J3QNE4 Rint1-203ENSMUST00000115113 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc180J3QNE4 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc180J3QNE4 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc180J3QNE4 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
Ccdc180J3QNE4 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc180J3QNE4 Btnl1-201ENSMUST00000080254 1861 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Ccdc180J3QNE4 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc180J3QNE4 Gm24981-201ENSMUST00000104459 132 ntBASIC19.47■□□□□ 0.71
Ccdc180J3QNE4 Gm11800-201ENSMUST00000120050 579 ntBASIC19.47■□□□□ 0.71
Ccdc180J3QNE4 Gm2316-201ENSMUST00000190613 921 ntBASIC19.47■□□□□ 0.71
Ccdc180J3QNE4 Abracl-203ENSMUST00000218994 425 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Ccdc180J3QNE4 Tcl1b1-202ENSMUST00000222342 664 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
Ccdc180J3QNE4 Gm9869-201ENSMUST00000063858 375 ntTSL 5 BASIC19.47■□□□□ 0.71
Ccdc180J3QNE4 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc180J3QNE4 Hsf2-204ENSMUST00000220042 2430 ntTSL 5 BASIC19.47■□□□□ 0.71
Ccdc180J3QNE4 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc180J3QNE4 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc180J3QNE4 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC19.47■□□□□ 0.71
Ccdc180J3QNE4 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc180J3QNE4 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc180J3QNE4 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc180J3QNE4 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Ccdc180J3QNE4 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Ccdc180J3QNE4 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Ccdc180J3QNE4 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc180J3QNE4 Hat1-201ENSMUST00000028408 1576 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc180J3QNE4 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc180J3QNE4 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Ccdc180J3QNE4 Zc3h18-202ENSMUST00000093073 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ccdc180J3QNE4 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc180J3QNE4 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Ccdc180J3QNE4 A630023P12Rik-203ENSMUST00000141532 638 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc180J3QNE4 Stard6-206ENSMUST00000174118 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc180J3QNE4 2700099C18Rik-203ENSMUST00000182475 969 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc180J3QNE4 B130024G19Rik-204ENSMUST00000191084 634 ntTSL 5 BASIC19.46■□□□□ 0.71
Ccdc180J3QNE4 Gm44155-201ENSMUST00000203923 412 ntBASIC19.46■□□□□ 0.71
Ccdc180J3QNE4 Mir341-201ENSMUST00000093593 96 ntBASIC19.46■□□□□ 0.71
Ccdc180J3QNE4 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
Ccdc180J3QNE4 A1bg-201ENSMUST00000096418 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc180J3QNE4 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc180J3QNE4 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Ccdc180J3QNE4 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
Ccdc180J3QNE4 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc180J3QNE4 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Ccdc180J3QNE4 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Ccdc180J3QNE4 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc180J3QNE4 Gm38271-201ENSMUST00000192296 1603 ntBASIC19.46■□□□□ 0.71
Ccdc180J3QNE4 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Ccdc180J3QNE4 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc180J3QNE4 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc180J3QNE4 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc180J3QNE4 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ccdc180J3QNE4 Cav2-203ENSMUST00000115462 694 ntTSL 5 BASIC19.46■□□□□ 0.71
Ccdc180J3QNE4 Gm6500-201ENSMUST00000119412 451 ntBASIC19.46■□□□□ 0.71
Ccdc180J3QNE4 Gm15554-201ENSMUST00000120406 913 ntBASIC19.46■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms