Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NpcdF8VQB8 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NpcdF8VQB8 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
NpcdF8VQB8 Gm30504-201ENSMUST00000209316 1688 ntTSL 5 BASIC13.12□□□□□ -0.31
NpcdF8VQB8 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
NpcdF8VQB8 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
NpcdF8VQB8 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
NpcdF8VQB8 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC13.11□□□□□ -0.31
NpcdF8VQB8 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
NpcdF8VQB8 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
NpcdF8VQB8 Gm29101-201ENSMUST00000188329 1471 ntBASIC13.11□□□□□ -0.31
NpcdF8VQB8 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
NpcdF8VQB8 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
NpcdF8VQB8 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
NpcdF8VQB8 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NpcdF8VQB8 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
NpcdF8VQB8 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
NpcdF8VQB8 Rgr-203ENSMUST00000225070 4704 ntBASIC13.11□□□□□ -0.31
NpcdF8VQB8 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
NpcdF8VQB8 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
NpcdF8VQB8 Mir705-201ENSMUST00000102058 82 ntBASIC13.11□□□□□ -0.31
NpcdF8VQB8 Gm5148-203ENSMUST00000108105 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NpcdF8VQB8 Capns1-202ENSMUST00000108196 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
NpcdF8VQB8 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
NpcdF8VQB8 Gm11365-201ENSMUST00000144277 774 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NpcdF8VQB8 2210408F21Rik-209ENSMUST00000146778 579 ntTSL 5 BASIC13.11□□□□□ -0.31
NpcdF8VQB8 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC13.11□□□□□ -0.31
NpcdF8VQB8 Gm22763-201ENSMUST00000158374 107 ntBASIC13.11□□□□□ -0.31
NpcdF8VQB8 Mir3060-201ENSMUST00000175339 83 ntBASIC13.11□□□□□ -0.31
NpcdF8VQB8 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC13.11□□□□□ -0.31
NpcdF8VQB8 Gm18391-201ENSMUST00000217189 658 ntBASIC13.11□□□□□ -0.31
NpcdF8VQB8 E230034D01Rik-203ENSMUST00000217357 1159 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NpcdF8VQB8 Gm19605-205ENSMUST00000221712 677 ntTSL 3 BASIC13.11□□□□□ -0.31
NpcdF8VQB8 Gm34667-201ENSMUST00000222974 1258 ntTSL 5 BASIC13.11□□□□□ -0.31
NpcdF8VQB8 CT025618.1-201ENSMUST00000227409 1279 ntBASIC13.11□□□□□ -0.31
NpcdF8VQB8 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC13.11□□□□□ -0.31
NpcdF8VQB8 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NpcdF8VQB8 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NpcdF8VQB8 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NpcdF8VQB8 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NpcdF8VQB8 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
NpcdF8VQB8 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
NpcdF8VQB8 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NpcdF8VQB8 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC13.1□□□□□ -0.31
NpcdF8VQB8 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NpcdF8VQB8 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NpcdF8VQB8 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
NpcdF8VQB8 Gm38273-201ENSMUST00000194987 2382 ntBASIC13.1□□□□□ -0.31
NpcdF8VQB8 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
NpcdF8VQB8 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NpcdF8VQB8 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NpcdF8VQB8 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NpcdF8VQB8 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
NpcdF8VQB8 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
NpcdF8VQB8 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NpcdF8VQB8 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
NpcdF8VQB8 Gm14997-201ENSMUST00000119232 636 ntBASIC13.1□□□□□ -0.31
NpcdF8VQB8 Chn2-209ENSMUST00000146114 1227 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NpcdF8VQB8 Gm25116-201ENSMUST00000157191 122 ntBASIC13.1□□□□□ -0.31
NpcdF8VQB8 Gm17231-201ENSMUST00000163186 645 ntTSL 3 BASIC13.1□□□□□ -0.31
NpcdF8VQB8 Pdc-201ENSMUST00000165062 1246 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
NpcdF8VQB8 Gm9574-201ENSMUST00000173127 845 ntBASIC13.1□□□□□ -0.31
NpcdF8VQB8 Gm3898-201ENSMUST00000180221 613 ntTSL 5 BASIC13.1□□□□□ -0.31
NpcdF8VQB8 Gm7539-201ENSMUST00000189789 630 ntBASIC13.1□□□□□ -0.31
NpcdF8VQB8 Fgfbp1-203ENSMUST00000199894 1228 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
NpcdF8VQB8 1700113A16Rik-203ENSMUST00000200006 563 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NpcdF8VQB8 Gm45745-201ENSMUST00000211447 1180 ntBASIC13.1□□□□□ -0.31
NpcdF8VQB8 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NpcdF8VQB8 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC13.1□□□□□ -0.31
NpcdF8VQB8 4930593A02Rik-201ENSMUST00000181694 1437 ntTSL 5 BASIC13.1□□□□□ -0.31
NpcdF8VQB8 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NpcdF8VQB8 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NpcdF8VQB8 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
NpcdF8VQB8 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
NpcdF8VQB8 4930579F01Rik-201ENSMUST00000012186 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NpcdF8VQB8 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC13.1□□□□□ -0.31
NpcdF8VQB8 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC13.1□□□□□ -0.31
NpcdF8VQB8 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
NpcdF8VQB8 Mcemp1-201ENSMUST00000014118 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NpcdF8VQB8 Galntl5-201ENSMUST00000030778 1627 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
NpcdF8VQB8 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NpcdF8VQB8 Gm43242-201ENSMUST00000199507 1776 ntBASIC13.09□□□□□ -0.31
NpcdF8VQB8 Ppid-201ENSMUST00000029382 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NpcdF8VQB8 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NpcdF8VQB8 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NpcdF8VQB8 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
NpcdF8VQB8 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
NpcdF8VQB8 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NpcdF8VQB8 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NpcdF8VQB8 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NpcdF8VQB8 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC13.09□□□□□ -0.31
NpcdF8VQB8 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
NpcdF8VQB8 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
NpcdF8VQB8 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC13.09□□□□□ -0.31
NpcdF8VQB8 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
NpcdF8VQB8 Bglap3-203ENSMUST00000107543 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NpcdF8VQB8 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
NpcdF8VQB8 Msrb1-202ENSMUST00000115262 886 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NpcdF8VQB8 Gm14227-201ENSMUST00000119431 629 ntBASIC13.09□□□□□ -0.31
NpcdF8VQB8 Gm8876-201ENSMUST00000120768 1122 ntBASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms