Protein–RNA interactions for Protein: B2RUQ2

Usf3, Gene model 608, (NCBI), mousemouse

Predictions only

Length 2,221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf3B2RUQ2 Mindy4-201ENSMUST00000053094 4270 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.96
Usf3B2RUQ2 Aldh1a3-201ENSMUST00000015278 3443 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.96
Usf3B2RUQ2 Gm45675-201ENSMUST00000211202 3429 ntBASIC9.09□□□□□ -0.96
Usf3B2RUQ2 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC9.09□□□□□ -0.96
Usf3B2RUQ2 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Usf3B2RUQ2 Zfp872-202ENSMUST00000178901 2958 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Usf3B2RUQ2 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Usf3B2RUQ2 Gm18210-201ENSMUST00000209001 1524 ntBASIC9.08□□□□□ -0.96
Usf3B2RUQ2 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Usf3B2RUQ2 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Usf3B2RUQ2 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC9.08□□□□□ -0.96
Usf3B2RUQ2 Lyn-201ENSMUST00000041377 3463 ntAPPRIS ALT1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Usf3B2RUQ2 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC9.08□□□□□ -0.96
Usf3B2RUQ2 Slx1b-203ENSMUST00000144897 3152 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Usf3B2RUQ2 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Usf3B2RUQ2 Gm9673-201ENSMUST00000119287 781 ntBASIC9.08□□□□□ -0.96
Usf3B2RUQ2 Gm4982-201ENSMUST00000160440 1098 ntBASIC9.08□□□□□ -0.96
Usf3B2RUQ2 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Usf3B2RUQ2 Gm7069-201ENSMUST00000182418 1008 ntBASIC9.08□□□□□ -0.96
Usf3B2RUQ2 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Usf3B2RUQ2 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Usf3B2RUQ2 Gm42867-201ENSMUST00000202995 469 ntBASIC9.08□□□□□ -0.96
Usf3B2RUQ2 Gm6423-201ENSMUST00000204315 934 ntBASIC9.08□□□□□ -0.96
Usf3B2RUQ2 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Usf3B2RUQ2 Gm40910-202ENSMUST00000223077 569 ntTSL 5 BASIC9.08□□□□□ -0.96
Usf3B2RUQ2 AC105408.1-201ENSMUST00000227771 802 ntBASIC9.08□□□□□ -0.96
Usf3B2RUQ2 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Usf3B2RUQ2 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Usf3B2RUQ2 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Usf3B2RUQ2 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Usf3B2RUQ2 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Usf3B2RUQ2 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Usf3B2RUQ2 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Usf3B2RUQ2 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC9.08□□□□□ -0.96
Usf3B2RUQ2 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Usf3B2RUQ2 Erich3-202ENSMUST00000098496 8280 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Usf3B2RUQ2 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Usf3B2RUQ2 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Usf3B2RUQ2 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Usf3B2RUQ2 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC9.08□□□□□ -0.96
Usf3B2RUQ2 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Usf3B2RUQ2 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Usf3B2RUQ2 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Usf3B2RUQ2 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Usf3B2RUQ2 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Usf3B2RUQ2 Zfp964-203ENSMUST00000204285 4333 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Usf3B2RUQ2 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC9.08□□□□□ -0.96
Usf3B2RUQ2 Zfp804b-202ENSMUST00000200317 4430 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Usf3B2RUQ2 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Usf3B2RUQ2 Sirpa-204ENSMUST00000103203 3674 ntAPPRIS P3 TSL 5 BASIC9.08□□□□□ -0.96
Usf3B2RUQ2 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Usf3B2RUQ2 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Usf3B2RUQ2 Trim9-205ENSMUST00000221041 3767 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Usf3B2RUQ2 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Usf3B2RUQ2 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC9.08□□□□□ -0.96
Usf3B2RUQ2 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
Usf3B2RUQ2 Pradc1-204ENSMUST00000126805 953 ntTSL 2 BASIC9.08□□□□□ -0.96
Usf3B2RUQ2 Gm22388-201ENSMUST00000158194 248 ntBASIC9.08□□□□□ -0.96
Usf3B2RUQ2 Gm6548-201ENSMUST00000167498 1165 ntBASIC9.08□□□□□ -0.96
Usf3B2RUQ2 Gm4895-201ENSMUST00000181646 1137 ntBASIC9.08□□□□□ -0.96
Usf3B2RUQ2 Gm9884-201ENSMUST00000194343 1222 ntBASIC9.08□□□□□ -0.96
Usf3B2RUQ2 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC9.08□□□□□ -0.96
Usf3B2RUQ2 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Usf3B2RUQ2 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Usf3B2RUQ2 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC9.08□□□□□ -0.96
Usf3B2RUQ2 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Usf3B2RUQ2 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC9.08□□□□□ -0.96
Usf3B2RUQ2 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Usf3B2RUQ2 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Usf3B2RUQ2 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Usf3B2RUQ2 Aspm-201ENSMUST00000053364 9867 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Usf3B2RUQ2 Gm43972-201ENSMUST00000181398 1467 ntBASIC9.07□□□□□ -0.96
Usf3B2RUQ2 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Usf3B2RUQ2 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Usf3B2RUQ2 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Usf3B2RUQ2 Nudt13-207ENSMUST00000224311 1574 ntBASIC9.07□□□□□ -0.96
Usf3B2RUQ2 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Usf3B2RUQ2 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Usf3B2RUQ2 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Usf3B2RUQ2 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Usf3B2RUQ2 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Usf3B2RUQ2 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Usf3B2RUQ2 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Usf3B2RUQ2 Gm24279-201ENSMUST00000104236 131 ntBASIC9.07□□□□□ -0.96
Usf3B2RUQ2 Gm14592-201ENSMUST00000117201 560 ntBASIC9.07□□□□□ -0.96
Usf3B2RUQ2 Gm3828-201ENSMUST00000121817 257 ntBASIC9.07□□□□□ -0.96
Usf3B2RUQ2 7420461P10Rik-201ENSMUST00000169439 781 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Usf3B2RUQ2 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Usf3B2RUQ2 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC9.07□□□□□ -0.96
Usf3B2RUQ2 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC9.07□□□□□ -0.96
Usf3B2RUQ2 Gm45469-201ENSMUST00000210468 854 ntTSL 3 BASIC9.07□□□□□ -0.96
Usf3B2RUQ2 Gm26670-202ENSMUST00000226862 340 ntBASIC9.07□□□□□ -0.96
Usf3B2RUQ2 Gm5449-201ENSMUST00000081132 357 ntBASIC9.07□□□□□ -0.96
Usf3B2RUQ2 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Usf3B2RUQ2 Ccdc62-202ENSMUST00000165148 3920 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Usf3B2RUQ2 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Usf3B2RUQ2 Gm10548-201ENSMUST00000097631 2629 ntBASIC9.07□□□□□ -0.96
Usf3B2RUQ2 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Usf3B2RUQ2 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Usf3B2RUQ2 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms