Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Trim13Q9CYB0 H2-Q3-201ENSMUST00000172583 608 ntBASIC10.04□□□□□ -0.8
Trim13Q9CYB0 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC10.04□□□□□ -0.8
Trim13Q9CYB0 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC10.04□□□□□ -0.8
Trim13Q9CYB0 Gm29199-201ENSMUST00000187766 775 ntBASIC10.04□□□□□ -0.8
Trim13Q9CYB0 Gm29107-201ENSMUST00000190910 347 ntBASIC10.04□□□□□ -0.8
Trim13Q9CYB0 Gm4959-201ENSMUST00000197271 1044 ntBASIC10.04□□□□□ -0.8
Trim13Q9CYB0 Gm43667-201ENSMUST00000198616 1095 ntBASIC10.04□□□□□ -0.8
Trim13Q9CYB0 AC133602.1-201ENSMUST00000227510 509 ntBASIC10.04□□□□□ -0.8
Trim13Q9CYB0 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trim13Q9CYB0 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trim13Q9CYB0 Olfr1437-201ENSMUST00000052558 1177 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Trim13Q9CYB0 Gm25125-201ENSMUST00000083340 136 ntBASIC10.04□□□□□ -0.8
Trim13Q9CYB0 Gm10288-201ENSMUST00000084614 537 ntBASIC10.04□□□□□ -0.8
Trim13Q9CYB0 Pms2-209ENSMUST00000148011 5482 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trim13Q9CYB0 Gm38192-201ENSMUST00000194364 1847 ntBASIC10.04□□□□□ -0.8
Trim13Q9CYB0 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trim13Q9CYB0 Gm3765-201ENSMUST00000130985 1447 ntBASIC10.04□□□□□ -0.8
Trim13Q9CYB0 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trim13Q9CYB0 Abhd4-201ENSMUST00000041197 2401 ntAPPRIS P4 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trim13Q9CYB0 Capn8-201ENSMUST00000048941 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trim13Q9CYB0 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trim13Q9CYB0 Mei4-203ENSMUST00000189832 2578 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trim13Q9CYB0 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trim13Q9CYB0 Extl1-201ENSMUST00000030643 4126 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trim13Q9CYB0 Kctd7-201ENSMUST00000040616 4291 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trim13Q9CYB0 Pla2g4a-201ENSMUST00000070200 2856 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trim13Q9CYB0 Txlng-204ENSMUST00000112316 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trim13Q9CYB0 Metap1-203ENSMUST00000197531 3708 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Trim13Q9CYB0 Dysf-204ENSMUST00000113821 6803 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Trim13Q9CYB0 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC10.04□□□□□ -0.8
Trim13Q9CYB0 Parp1-201ENSMUST00000027777 3873 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trim13Q9CYB0 Cacna1d-207ENSMUST00000224198 6564 ntAPPRIS ALT2 BASIC10.04□□□□□ -0.8
Trim13Q9CYB0 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Trim13Q9CYB0 Slc1a2-204ENSMUST00000111213 2093 ntTSL 5 BASIC10.03□□□□□ -0.8
Trim13Q9CYB0 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trim13Q9CYB0 Ampd2-201ENSMUST00000078912 3368 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Trim13Q9CYB0 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trim13Q9CYB0 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trim13Q9CYB0 Prox1-203ENSMUST00000177288 3144 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Trim13Q9CYB0 Frmd4a-219ENSMUST00000177457 6538 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Trim13Q9CYB0 Cuzd1-201ENSMUST00000046611 2256 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trim13Q9CYB0 Rnf2-201ENSMUST00000076110 3160 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trim13Q9CYB0 Fubp1-201ENSMUST00000106121 4525 ntAPPRIS P2 TSL 2 BASIC10.03□□□□□ -0.8
Trim13Q9CYB0 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
Trim13Q9CYB0 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trim13Q9CYB0 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trim13Q9CYB0 Gm11941-201ENSMUST00000119904 610 ntBASIC10.03□□□□□ -0.8
Trim13Q9CYB0 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trim13Q9CYB0 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC10.03□□□□□ -0.8
Trim13Q9CYB0 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC10.03□□□□□ -0.8
Trim13Q9CYB0 Gm3150-201ENSMUST00000166418 204 ntBASIC10.03□□□□□ -0.8
Trim13Q9CYB0 Gm3149-203ENSMUST00000179649 618 ntAPPRIS ALT2 TSL 2 BASIC10.03□□□□□ -0.8
Trim13Q9CYB0 6430562O15Rik-201ENSMUST00000180491 2488 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trim13Q9CYB0 Gm21147-201ENSMUST00000186046 913 ntBASIC10.03□□□□□ -0.8
Trim13Q9CYB0 Gm29013-201ENSMUST00000187431 237 ntBASIC10.03□□□□□ -0.8
Trim13Q9CYB0 Gm28746-201ENSMUST00000187453 380 ntBASIC10.03□□□□□ -0.8
Trim13Q9CYB0 Gm7504-201ENSMUST00000201449 424 ntBASIC10.03□□□□□ -0.8
Trim13Q9CYB0 Gm43275-201ENSMUST00000202053 1020 ntBASIC10.03□□□□□ -0.8
Trim13Q9CYB0 Gm44262-201ENSMUST00000204969 372 ntBASIC10.03□□□□□ -0.8
Trim13Q9CYB0 Gm18642-201ENSMUST00000206642 1400 ntBASIC10.03□□□□□ -0.8
Trim13Q9CYB0 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC10.03□□□□□ -0.8
Trim13Q9CYB0 E330011O21Rik-205ENSMUST00000211317 1062 ntTSL 5 BASIC10.03□□□□□ -0.8
Trim13Q9CYB0 Gm18212-201ENSMUST00000211678 889 ntBASIC10.03□□□□□ -0.8
Trim13Q9CYB0 Gm17917-201ENSMUST00000218561 953 ntBASIC10.03□□□□□ -0.8
Trim13Q9CYB0 CT009713.8-202ENSMUST00000224732 385 ntBASIC10.03□□□□□ -0.8
Trim13Q9CYB0 Nln-205ENSMUST00000224945 2486 ntBASIC10.03□□□□□ -0.8
Trim13Q9CYB0 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trim13Q9CYB0 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trim13Q9CYB0 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trim13Q9CYB0 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trim13Q9CYB0 Mir433-201ENSMUST00000093564 124 ntBASIC10.03□□□□□ -0.8
Trim13Q9CYB0 Gm10643-201ENSMUST00000098592 1577 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Trim13Q9CYB0 Alms1-201ENSMUST00000072018 9986 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trim13Q9CYB0 Gdi1-201ENSMUST00000015435 2666 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trim13Q9CYB0 Rnf121-203ENSMUST00000106953 2545 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trim13Q9CYB0 Hsdl1-204ENSMUST00000212517 2215 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trim13Q9CYB0 Zzef1-208ENSMUST00000207107 11306 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Trim13Q9CYB0 Adgrd1-201ENSMUST00000056617 5163 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trim13Q9CYB0 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC10.03□□□□□ -0.8
Trim13Q9CYB0 Gm37651-201ENSMUST00000194679 1494 ntBASIC10.03□□□□□ -0.8
Trim13Q9CYB0 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trim13Q9CYB0 Vmn1r199-203ENSMUST00000227689 5537 ntAPPRIS ALT2 BASIC10.03□□□□□ -0.8
Trim13Q9CYB0 Gm29500-201ENSMUST00000185992 1344 ntTSL 5 BASIC10.03□□□□□ -0.8
Trim13Q9CYB0 Crry-ps-201ENSMUST00000079090 1309 ntBASIC10.03□□□□□ -0.8
Trim13Q9CYB0 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Trim13Q9CYB0 Zc3hav1-203ENSMUST00000114900 4944 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Trim13Q9CYB0 Pbld1-202ENSMUST00000178684 2404 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trim13Q9CYB0 Ccdc167-203ENSMUST00000129091 2256 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trim13Q9CYB0 Slit2-208ENSMUST00000173107 9960 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trim13Q9CYB0 Gm43660-201ENSMUST00000200956 6548 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trim13Q9CYB0 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trim13Q9CYB0 Erc2-201ENSMUST00000090302 6083 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trim13Q9CYB0 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trim13Q9CYB0 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trim13Q9CYB0 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trim13Q9CYB0 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Trim13Q9CYB0 Gm7993-201ENSMUST00000200970 1384 ntBASIC10.02□□□□□ -0.8
Trim13Q9CYB0 Sipa1l1-210ENSMUST00000222714 6002 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trim13Q9CYB0 Kcnv1-201ENSMUST00000022967 4389 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms