Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
RtcbQ99LF4 Edn1-201ENSMUST00000021796 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RtcbQ99LF4 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RtcbQ99LF4 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC13.39□□□□□ -0.27
RtcbQ99LF4 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
RtcbQ99LF4 Mir291b-201ENSMUST00000104838 79 ntBASIC13.39□□□□□ -0.27
RtcbQ99LF4 Gm12946-201ENSMUST00000122969 519 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RtcbQ99LF4 Gm45591-201ENSMUST00000129058 843 ntTSL 3 BASIC13.39□□□□□ -0.27
RtcbQ99LF4 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC13.39□□□□□ -0.27
RtcbQ99LF4 Gm12207-201ENSMUST00000143016 494 ntTSL 2 BASIC13.39□□□□□ -0.27
RtcbQ99LF4 Glrx2-206ENSMUST00000145969 924 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
RtcbQ99LF4 Gm16235-202ENSMUST00000149562 206 ntTSL 3 BASIC13.39□□□□□ -0.27
RtcbQ99LF4 Gm24074-201ENSMUST00000158178 260 ntBASIC13.39□□□□□ -0.27
RtcbQ99LF4 H2al1e-201ENSMUST00000178979 494 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
RtcbQ99LF4 Mir6396-201ENSMUST00000183603 111 ntBASIC13.39□□□□□ -0.27
RtcbQ99LF4 H2al1b-201ENSMUST00000189531 495 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
RtcbQ99LF4 Gm38103-201ENSMUST00000191707 864 ntBASIC13.39□□□□□ -0.27
RtcbQ99LF4 Gm18862-201ENSMUST00000204643 933 ntBASIC13.39□□□□□ -0.27
RtcbQ99LF4 Gm29328-212ENSMUST00000209182 1168 ntTSL 5 BASIC13.39□□□□□ -0.27
RtcbQ99LF4 Gm18124-201ENSMUST00000210695 706 ntBASIC13.39□□□□□ -0.27
RtcbQ99LF4 Nqo2-203ENSMUST00000220844 957 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RtcbQ99LF4 Gm19605-205ENSMUST00000221712 677 ntTSL 3 BASIC13.39□□□□□ -0.27
RtcbQ99LF4 AC165260.2-201ENSMUST00000225371 395 ntBASIC13.39□□□□□ -0.27
RtcbQ99LF4 AC164883.7-201ENSMUST00000228534 851 ntBASIC13.39□□□□□ -0.27
RtcbQ99LF4 Calm4-201ENSMUST00000042219 917 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
RtcbQ99LF4 2010001K21Rik-201ENSMUST00000060680 519 ntBASIC13.39□□□□□ -0.27
RtcbQ99LF4 Stxbp4-203ENSMUST00000107875 1660 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RtcbQ99LF4 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RtcbQ99LF4 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RtcbQ99LF4 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
RtcbQ99LF4 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RtcbQ99LF4 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RtcbQ99LF4 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RtcbQ99LF4 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
RtcbQ99LF4 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC13.39□□□□□ -0.27
RtcbQ99LF4 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RtcbQ99LF4 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RtcbQ99LF4 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC13.39□□□□□ -0.27
RtcbQ99LF4 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RtcbQ99LF4 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
RtcbQ99LF4 Gm7061-201ENSMUST00000118127 1416 ntBASIC13.39□□□□□ -0.27
RtcbQ99LF4 Ano4-202ENSMUST00000181976 1410 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RtcbQ99LF4 Gm6713-201ENSMUST00000216137 1446 ntBASIC13.39□□□□□ -0.27
RtcbQ99LF4 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
RtcbQ99LF4 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RtcbQ99LF4 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
RtcbQ99LF4 Hormad2-202ENSMUST00000109948 1969 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
RtcbQ99LF4 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
RtcbQ99LF4 Nupl1-206ENSMUST00000225111 2936 ntBASIC13.38□□□□□ -0.27
RtcbQ99LF4 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RtcbQ99LF4 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RtcbQ99LF4 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
RtcbQ99LF4 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
RtcbQ99LF4 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RtcbQ99LF4 Slc25a21-202ENSMUST00000110680 918 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
RtcbQ99LF4 Tpm1-205ENSMUST00000113685 1208 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
RtcbQ99LF4 Gm11544-201ENSMUST00000120215 382 ntBASIC13.38□□□□□ -0.27
RtcbQ99LF4 Gm13393-201ENSMUST00000141935 396 ntTSL 5 BASIC13.38□□□□□ -0.27
RtcbQ99LF4 4930505M18Rik-201ENSMUST00000175854 1288 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RtcbQ99LF4 D330041H03Rik-202ENSMUST00000180390 411 ntTSL 2 BASIC13.38□□□□□ -0.27
RtcbQ99LF4 Gm6008-201ENSMUST00000206542 874 ntBASIC13.38□□□□□ -0.27
RtcbQ99LF4 Gm12248-203ENSMUST00000219877 1160 ntAPPRIS P5 TSL 5 BASIC13.38□□□□□ -0.27
RtcbQ99LF4 Tcl1b1-202ENSMUST00000222342 664 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
RtcbQ99LF4 AC130217.1-201ENSMUST00000224146 909 ntBASIC13.38□□□□□ -0.27
RtcbQ99LF4 Hesx1-202ENSMUST00000224331 983 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
RtcbQ99LF4 Rps14-201ENSMUST00000025511 683 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RtcbQ99LF4 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RtcbQ99LF4 Atp6v1e2-201ENSMUST00000065758 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RtcbQ99LF4 Tnnt1-201ENSMUST00000071798 1027 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
RtcbQ99LF4 Gm23458-201ENSMUST00000083257 169 ntBASIC13.38□□□□□ -0.27
RtcbQ99LF4 Olfr553-201ENSMUST00000098222 981 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
RtcbQ99LF4 Gm43622-201ENSMUST00000200140 2019 ntBASIC13.38□□□□□ -0.27
RtcbQ99LF4 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RtcbQ99LF4 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RtcbQ99LF4 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RtcbQ99LF4 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
RtcbQ99LF4 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
RtcbQ99LF4 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
RtcbQ99LF4 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RtcbQ99LF4 Slc1a4-202ENSMUST00000109594 3926 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
RtcbQ99LF4 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RtcbQ99LF4 Tmigd1-202ENSMUST00000102495 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RtcbQ99LF4 Gm6783-201ENSMUST00000120916 1437 ntBASIC13.38□□□□□ -0.27
RtcbQ99LF4 Slc17a8-202ENSMUST00000105295 1863 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RtcbQ99LF4 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
RtcbQ99LF4 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RtcbQ99LF4 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC13.37□□□□□ -0.27
RtcbQ99LF4 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
RtcbQ99LF4 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RtcbQ99LF4 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
RtcbQ99LF4 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RtcbQ99LF4 Faf2-201ENSMUST00000026991 1748 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RtcbQ99LF4 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
RtcbQ99LF4 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RtcbQ99LF4 A930003A15Rik-201ENSMUST00000100083 746 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RtcbQ99LF4 3110039M20Rik-201ENSMUST00000127041 868 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RtcbQ99LF4 Gm15489-201ENSMUST00000132811 973 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RtcbQ99LF4 Rps18-206ENSMUST00000174609 527 ntTSL 2 BASIC13.37□□□□□ -0.27
RtcbQ99LF4 Pik3r4-206ENSMUST00000188784 1295 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RtcbQ99LF4 Gm9515-201ENSMUST00000200276 647 ntBASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms